EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000012359 (Gene tree)
Gene ID
103043434
Gene Symbol
cnot3a
Alias
fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
6547 bases
Position
chr10:21674708-21681254
Accession
103043434
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000012718Not3PF04065.152.2e-9611
ENSAMXP00000033386Not3PF04065.157e-7312
ENSAMXP00000033386Not3PF04065.157e-7322
ENSAMXP00000033386NOT2_3_5PF04153.186.1e-3911
ENSAMXP00000012718NOT2_3_5PF04153.186.3e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000031688-2676-ENSAMXP00000033386879 (aa)--
ENSAMXT00000012718-2766XM_007254504ENSAMXP00000012718909 (aa)XP_007254566W5KYQ6
Gene Model
Click here to download ENSAMXG00000012359's gene model file
Pathways
Pathway IDPathway NameSource
amex03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012359's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000012359cnot3a7389.730ENSAMXG00000009447cnot3b9593.373
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000012359cnot3a5884.746ENSAPOG00000015002cnot3b8981.702Acanthochromis_polyacanthus
ENSAMXG00000012359cnot3a5597.009ENSAPOG00000015499CNOT39285.357Acanthochromis_polyacanthus
ENSAMXG00000012359cnot3a7288.387ENSAMEG00000004528CNOT37689.508Ailuropoda_melanoleuca
ENSAMXG00000012359cnot3a6792.857ENSACIG00000003652cnot3b9892.857Amphilophus_citrinellus
ENSAMXG00000012359cnot3a10072.270ENSACIG00000006635cnot3a9897.009Amphilophus_citrinellus
ENSAMXG00000012359cnot3a9762.775ENSAOCG00000018385-9777.033Amphiprion_ocellaris
ENSAMXG00000012359cnot3a5267.880ENSAOCG00000023769cnot3a9972.440Amphiprion_ocellaris
ENSAMXG00000012359cnot3a5472.385ENSAPEG00000006624cnot3a10074.218Amphiprion_percula
ENSAMXG00000012359cnot3a9765.601ENSAPEG00000002640cnot3b9693.810Amphiprion_percula
ENSAMXG00000012359cnot3a10069.295ENSATEG00000015777cnot3b10067.684Anabas_testudineus
ENSAMXG00000012359cnot3a10075.510ENSATEG00000022737cnot3a10076.940Anabas_testudineus
ENSAMXG00000012359cnot3a6489.286ENSACAG00000016085CNOT38889.508Anolis_carolinensis
ENSAMXG00000012359cnot3a7675.573ENSANAG00000025756CNOT37889.180Aotus_nancymaae
ENSAMXG00000012359cnot3a10073.369ENSACLG00000021136cnot3a10075.268Astatotilapia_calliptera
ENSAMXG00000012359cnot3a10068.042ENSACLG00000016702cnot3b10066.596Astatotilapia_calliptera
ENSAMXG00000012359cnot3a6888.065ENSBTAG00000014900CNOT37689.180Bos_taurus
ENSAMXG00000012359cnot3a7675.573ENSCJAG00000001094CNOT37589.180Callithrix_jacchus
ENSAMXG00000012359cnot3a8474.314ENSCAFG00000002699CNOT37589.180Canis_familiaris
ENSAMXG00000012359cnot3a8474.314ENSCAFG00020018359CNOT37589.180Canis_lupus_dingo
ENSAMXG00000012359cnot3a6786.084ENSCHIG00000015302CNOT37787.171Capra_hircus
ENSAMXG00000012359cnot3a6888.065ENSTSYG00000008058CNOT37689.180Carlito_syrichta
ENSAMXG00000012359cnot3a6888.065ENSCAPG00000009533CNOT37589.180Cavia_aperea
ENSAMXG00000012359cnot3a8275.064ENSCPOG00000020741CNOT37589.180Cavia_porcellus
ENSAMXG00000012359cnot3a7675.573ENSCCAG00000036290CNOT37989.180Cebus_capucinus
ENSAMXG00000012359cnot3a7674.745ENSCATG00000030324CNOT37589.180Cercocebus_atys
ENSAMXG00000012359cnot3a8275.318ENSCLAG00000003302CNOT310085.366Chinchilla_lanigera
ENSAMXG00000012359cnot3a7674.745ENSCSAG00000001900CNOT37589.180Chlorocebus_sabaeus
ENSAMXG00000012359cnot3a7088.961ENSCPBG00000011655CNOT38889.508Chrysemys_picta_bellii
ENSAMXG00000012359cnot3a8250.997ENSCING00000000293-7468.595Ciona_intestinalis
ENSAMXG00000012359cnot3a6888.065ENSCANG00000013408CNOT37589.180Colobus_angolensis_palliatus
ENSAMXG00000012359cnot3a8675.064ENSCGRG00001000855Cnot37589.508Cricetulus_griseus_chok1gshd
ENSAMXG00000012359cnot3a10072.428ENSCSEG00000003574cnot3a10072.910Cynoglossus_semilaevis
ENSAMXG00000012359cnot3a8279.263ENSCSEG00000016892cnot3b7281.373Cynoglossus_semilaevis
ENSAMXG00000012359cnot3a10072.629ENSCVAG00000008168cnot3a10071.199Cyprinodon_variegatus
ENSAMXG00000012359cnot3a10067.384ENSCVAG00000022122cnot3b10066.881Cyprinodon_variegatus
ENSAMXG00000012359cnot3a10083.589ENSDARG00000007135cnot3a10083.589Danio_rerio
ENSAMXG00000012359cnot3a6061.842ENSDARG00000019842cnot3b10065.368Danio_rerio
ENSAMXG00000012359cnot3a6887.742ENSDNOG00000045972CNOT37588.852Dasypus_novemcinctus
ENSAMXG00000012359cnot3a7673.804ENSDORG00000008021Cnot310080.460Dipodomys_ordii
ENSAMXG00000012359cnot3a52100.000ENSETEG00000006305CNOT363100.000Echinops_telfairi
ENSAMXG00000012359cnot3a6773.377ENSEBUG00000010437cnot3a7170.779Eptatretus_burgeri
ENSAMXG00000012359cnot3a6888.065ENSEASG00005021591CNOT37589.180Equus_asinus_asinus
ENSAMXG00000012359cnot3a6888.065ENSECAG00000023181CNOT37589.180Equus_caballus
ENSAMXG00000012359cnot3a10067.610ENSELUG00000000953cnot3b5163.169Esox_lucius
ENSAMXG00000012359cnot3a10069.005ENSELUG00000014743cnot3a10069.479Esox_lucius
ENSAMXG00000012359cnot3a7588.065ENSFCAG00000014042CNOT37689.180Felis_catus
ENSAMXG00000012359cnot3a10072.856ENSFHEG00000023166cnot3a9697.436Fundulus_heteroclitus
ENSAMXG00000012359cnot3a10065.708ENSFHEG00000001696cnot3b10065.466Fundulus_heteroclitus
ENSAMXG00000012359cnot3a9469.177ENSGMOG00000005365cnot3a9869.931Gadus_morhua
ENSAMXG00000012359cnot3a10067.880ENSGAFG00000003459cnot3b10067.742Gambusia_affinis
ENSAMXG00000012359cnot3a5966.475ENSGAFG00000013094cnot3a10072.425Gambusia_affinis
ENSAMXG00000012359cnot3a6681.203ENSGACG00000009395cnot3b5685.714Gasterosteus_aculeatus
ENSAMXG00000012359cnot3a9470.151ENSGACG00000011489cnot3a9871.132Gasterosteus_aculeatus
ENSAMXG00000012359cnot3a6687.938ENSGAGG00000012677CNOT38586.697Gopherus_agassizii
ENSAMXG00000012359cnot3a7274.242ENSGGOG00000012996CNOT37989.180Gorilla_gorilla
ENSAMXG00000012359cnot3a9961.940ENSHBUG00000019699cnot3b9960.468Haplochromis_burtoni
ENSAMXG00000012359cnot3a10073.262ENSHBUG00000005275cnot3a10075.161Haplochromis_burtoni
ENSAMXG00000012359cnot3a7674.235ENSHGLG00000008821CNOT310080.460Heterocephalus_glaber_female
ENSAMXG00000012359cnot3a6084.291ENSHGLG00100006181CNOT310080.460Heterocephalus_glaber_male
ENSAMXG00000012359cnot3a10071.659ENSHCOG00000020968cnot3a10071.765Hippocampus_comes
ENSAMXG00000012359cnot3a10074.179ENSIPUG00000000167cnot310082.041Ictalurus_punctatus
ENSAMXG00000012359cnot3a10066.448ENSIPUG00000009046cnot3b10064.680Ictalurus_punctatus
ENSAMXG00000012359cnot3a6888.065ENSSTOG00000028248CNOT37589.180Ictidomys_tridecemlineatus
ENSAMXG00000012359cnot3a7388.387ENSJJAG00000014594Cnot310080.460Jaculus_jaculus
ENSAMXG00000012359cnot3a10073.106ENSKMAG00000004863cnot3a10072.912Kryptolebias_marmoratus
ENSAMXG00000012359cnot3a10069.817ENSKMAG00000018723cnot3b10069.495Kryptolebias_marmoratus
ENSAMXG00000012359cnot3a9665.746ENSLBEG00000018278cnot3b7289.542Labrus_bergylta
ENSAMXG00000012359cnot3a6391.743ENSLBEG00000017296cnot3a6591.765Labrus_bergylta
ENSAMXG00000012359cnot3a6886.774ENSLACG00000009742CNOT37887.869Latimeria_chalumnae
ENSAMXG00000012359cnot3a5492.771ENSLOCG00000000005cnot3b8492.771Lepisosteus_oculatus
ENSAMXG00000012359cnot3a6887.460ENSLAFG00000022133CNOT37588.562Loxodonta_africana
ENSAMXG00000012359cnot3a8375.000ENSMFAG00000040073CNOT37589.180Macaca_fascicularis
ENSAMXG00000012359cnot3a6092.437ENSMMUG00000009698CNOT310096.078Macaca_mulatta
ENSAMXG00000012359cnot3a7674.745ENSMNEG00000036750CNOT37589.180Macaca_nemestrina
ENSAMXG00000012359cnot3a7674.745ENSMLEG00000036579CNOT37589.180Mandrillus_leucophaeus
ENSAMXG00000012359cnot3a6169.161ENSMAMG00000019397cnot3a10075.269Mastacembelus_armatus
ENSAMXG00000012359cnot3a10068.038ENSMAMG00000019357cnot3b10067.899Mastacembelus_armatus
ENSAMXG00000012359cnot3a10073.369ENSMZEG00005016304cnot3a10075.268Maylandia_zebra
ENSAMXG00000012359cnot3a10068.365ENSMZEG00005002466cnot3b10067.230Maylandia_zebra
ENSAMXG00000012359cnot3a8675.318ENSMAUG00000014996Cnot37589.508Mesocricetus_auratus
ENSAMXG00000012359cnot3a6387.025ENSMICG00000002370CNOT37589.180Microcebus_murinus
ENSAMXG00000012359cnot3a6891.026ENSMMOG00000013086cnot3b9791.026Mola_mola
ENSAMXG00000012359cnot3a10072.306ENSMMOG00000016446cnot3a10073.763Mola_mola
ENSAMXG00000012359cnot3a5989.474ENSMODG00000004066CNOT37689.180Monodelphis_domestica
ENSAMXG00000012359cnot3a10075.189ENSMALG00000009204cnot3a10075.565Monopterus_albus
ENSAMXG00000012359cnot3a7686.149ENSMALG00000004936cnot3b9485.859Monopterus_albus
ENSAMXG00000012359cnot3a7674.490MGP_CAROLIEiJ_G0029095Cnot310098.000Mus_caroli
ENSAMXG00000012359cnot3a7674.490ENSMUSG00000035632Cnot310098.000Mus_musculus
ENSAMXG00000012359cnot3a7674.307MGP_PahariEiJ_G0020964Cnot310098.000Mus_pahari
ENSAMXG00000012359cnot3a7674.490MGP_SPRETEiJ_G0030148Cnot310098.000Mus_spretus
ENSAMXG00000012359cnot3a6888.065ENSMPUG00000010352CNOT37589.180Mustela_putorius_furo
ENSAMXG00000012359cnot3a7673.804ENSNGAG00000013266Cnot37589.180Nannospalax_galili
ENSAMXG00000012359cnot3a9173.656ENSNBRG00000003336cnot3b9689.823Neolamprologus_brichardi
ENSAMXG00000012359cnot3a6167.336ENSNBRG00000002401cnot3a10071.627Neolamprologus_brichardi
ENSAMXG00000012359cnot3a7873.618ENSNLEG00000006272CNOT37489.180Nomascus_leucogenys
ENSAMXG00000012359cnot3a7675.064ENSODEG00000000705CNOT310088.608Octodon_degus
ENSAMXG00000012359cnot3a10073.340ENSONIG00000006568cnot3a10074.359Oreochromis_niloticus
ENSAMXG00000012359cnot3a10069.264ENSONIG00000007047cnot3b10067.831Oreochromis_niloticus
ENSAMXG00000012359cnot3a8272.794ENSOCUG00000007691CNOT37689.180Oryctolagus_cuniculus
ENSAMXG00000012359cnot3a6459.259ENSORLG00000005982cnot3b10067.961Oryzias_latipes
ENSAMXG00000012359cnot3a10072.384ENSORLG00000011174cnot3a10072.941Oryzias_latipes
ENSAMXG00000012359cnot3a10072.276ENSORLG00020008009cnot3a10072.465Oryzias_latipes_hni
ENSAMXG00000012359cnot3a6459.187ENSORLG00020005779cnot3b10067.819Oryzias_latipes_hni
ENSAMXG00000012359cnot3a10072.619ENSORLG00015013729cnot3a10072.941Oryzias_latipes_hsok
ENSAMXG00000012359cnot3a6459.541ENSORLG00015019021cnot3b10067.489Oryzias_latipes_hsok
ENSAMXG00000012359cnot3a10073.326ENSOMEG00000010309cnot3a10073.233Oryzias_melastigma
ENSAMXG00000012359cnot3a10066.703ENSOMEG00000015557cnot3b10066.992Oryzias_melastigma
ENSAMXG00000012359cnot3a7675.318ENSOGAG00000006945CNOT37589.180Otolemur_garnettii
ENSAMXG00000012359cnot3a7274.242ENSPPAG00000002748CNOT37989.180Pan_paniscus
ENSAMXG00000012359cnot3a7588.065ENSPPRG00000011705CNOT37689.180Panthera_pardus
ENSAMXG00000012359cnot3a6189.597ENSPTIG00000008781CNOT39689.597Panthera_tigris_altaica
ENSAMXG00000012359cnot3a7274.242ENSPTRG00000046717-7989.180Pan_troglodytes
ENSAMXG00000012359cnot3a7274.242ENSPTRG00000011444CNOT37989.180Pan_troglodytes
ENSAMXG00000012359cnot3a7674.745ENSPANG00000009375CNOT37589.180Papio_anubis
ENSAMXG00000012359cnot3a6895.726ENSPKIG00000015967-10090.837Paramormyrops_kingsleyae
ENSAMXG00000012359cnot3a10067.053ENSPKIG00000011733CNOT310065.364Paramormyrops_kingsleyae
ENSAMXG00000012359cnot3a8675.573ENSPEMG00000024185Cnot37589.508Peromyscus_maniculatus_bairdii
ENSAMXG00000012359cnot3a7089.145ENSPCIG00000023018CNOT38988.852Phascolarctos_cinereus
ENSAMXG00000012359cnot3a7592.000ENSPFOG00000008693cnot3a9490.000Poecilia_formosa
ENSAMXG00000012359cnot3a10067.777ENSPFOG00000007168cnot3b10067.527Poecilia_formosa
ENSAMXG00000012359cnot3a10067.777ENSPLAG00000013457cnot3b10067.527Poecilia_latipinna
ENSAMXG00000012359cnot3a10068.133ENSPMEG00000010184cnot3b10067.742Poecilia_mexicana
ENSAMXG00000012359cnot3a5049.263ENSPREG00000000766-9452.643Poecilia_reticulata
ENSAMXG00000012359cnot3a9961.720ENSPREG00000000662cnot3b9762.923Poecilia_reticulata
ENSAMXG00000012359cnot3a10065.870ENSPREG00000007592cnot3a10093.200Poecilia_reticulata
ENSAMXG00000012359cnot3a5592.373ENSPCAG00000011999CNOT35692.373Procavia_capensis
ENSAMXG00000012359cnot3a6387.025ENSPCOG00000017673CNOT37789.180Propithecus_coquereli
ENSAMXG00000012359cnot3a8272.139ENSPVAG00000015564CNOT37688.852Pteropus_vampyrus
ENSAMXG00000012359cnot3a10073.369ENSPNYG00000002282cnot3a10075.268Pundamilia_nyererei
ENSAMXG00000012359cnot3a9962.860ENSPNYG00000003358cnot3b9961.530Pundamilia_nyererei
ENSAMXG00000012359cnot3a10069.924ENSPNAG00000027459cnot3b10067.492Pygocentrus_nattereri
ENSAMXG00000012359cnot3a10094.408ENSPNAG00000017679cnot3a10094.627Pygocentrus_nattereri
ENSAMXG00000012359cnot3a7675.318ENSRNOG00000053234Cnot37589.508Rattus_norvegicus
ENSAMXG00000012359cnot3a8375.000ENSRBIG00000031025CNOT37589.180Rhinopithecus_bieti
ENSAMXG00000012359cnot3a8375.255ENSRROG00000003872CNOT37689.180Rhinopithecus_roxellana
ENSAMXG00000012359cnot3a8469.300ENSSBOG00000030268CNOT37889.180Saimiri_boliviensis_boliviensis
ENSAMXG00000012359cnot3a10068.770ENSSFOG00015019203-10067.025Scleropages_formosus
ENSAMXG00000012359cnot3a10070.086ENSSFOG00015000248cnot310069.222Scleropages_formosus
ENSAMXG00000012359cnot3a10074.705ENSSMAG00000013235cnot3a10073.936Scophthalmus_maximus
ENSAMXG00000012359cnot3a10069.789ENSSDUG00000003428cnot3b10068.526Seriola_dumerili
ENSAMXG00000012359cnot3a10073.019ENSSDUG00000008181cnot3a9897.436Seriola_dumerili
ENSAMXG00000012359cnot3a10069.789ENSSLDG00000014376cnot3b10068.526Seriola_lalandi_dorsalis
ENSAMXG00000012359cnot3a9673.363ENSSLDG00000014733cnot3a9974.419Seriola_lalandi_dorsalis
ENSAMXG00000012359cnot3a7175.696ENSSPUG00000008510CNOT37989.180Sphenodon_punctatus
ENSAMXG00000012359cnot3a10068.796ENSSPAG00000001429cnot3b10069.565Stegastes_partitus
ENSAMXG00000012359cnot3a8792.969ENSSPAG00000003858cnot3a9092.969Stegastes_partitus
ENSAMXG00000012359cnot3a6888.065ENSSSCG00000003264CNOT37589.180Sus_scrofa
ENSAMXG00000012359cnot3a10075.027ENSTRUG00000015732cnot3a10075.135Takifugu_rubripes
ENSAMXG00000012359cnot3a9464.579ENSTNIG00000005663cnot3b10062.358Tetraodon_nigroviridis
ENSAMXG00000012359cnot3a9472.612ENSTNIG00000008082cnot3a10072.018Tetraodon_nigroviridis
ENSAMXG00000012359cnot3a7288.387ENSUAMG00000005234CNOT37689.508Ursus_americanus
ENSAMXG00000012359cnot3a6188.926ENSUMAG00000010934CNOT38992.857Ursus_maritimus
ENSAMXG00000012359cnot3a7089.474ENSVVUG00000008239CNOT37489.180Vulpes_vulpes
ENSAMXG00000012359cnot3a7487.908ENSXETG00000003166cnot38688.350Xenopus_tropicalis
ENSAMXG00000012359cnot3a9663.556ENSXCOG00000018976cnot3b9962.111Xiphophorus_couchianus
ENSAMXG00000012359cnot3a9488.128ENSXCOG00000019460cnot3a9797.009Xiphophorus_couchianus
ENSAMXG00000012359cnot3a10072.678ENSXMAG00000012273cnot3a10072.151Xiphophorus_maculatus
ENSAMXG00000012359cnot3a10066.488ENSXMAG00000014176cnot3b10067.562Xiphophorus_maculatus

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