EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012409 (Gene tree)
Gene ID: 103046782
Gene Symbol: sltm
Alias: wu:fd12b08|zgc:65985
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 22967 bases
Position: chrAPWO02002141.1:31381-54347
Accession: 103046782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012761	RRM_5	PF13893.6	2.6e-08	1	1
ENSAMXP00000012761	RRM_1	PF00076.22	7.3e-11	1	1
ENSAMXP00000012761	SAP	PF02037.27	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012761	-	3468	XM_022664126	ENSAMXP00000012761	1054 (aa)	XP_022519847	W5KYU9

Gene Model

Click here to download ENSAMXG00000012409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012409's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012409	sltm	95	51.821	ENSG00000137776	SLTM	99	55.357	Homo_sapiens
ENSAMXG00000012409	sltm	96	66.278	ENSAPOG00000012346	sltm	99	64.230	Acanthochromis_polyacanthus
ENSAMXG00000012409	sltm	91	51.891	ENSAMEG00000004537	SLTM	82	53.828	Ailuropoda_melanoleuca
ENSAMXG00000012409	sltm	96	61.975	ENSACIG00000001971	sltm	99	58.489	Amphilophus_citrinellus
ENSAMXG00000012409	sltm	96	65.340	ENSAOCG00000002747	sltm	99	64.912	Amphiprion_ocellaris
ENSAMXG00000012409	sltm	96	65.437	ENSAPEG00000012366	sltm	99	65.010	Amphiprion_percula
ENSAMXG00000012409	sltm	96	63.680	ENSATEG00000003763	sltm	99	63.495	Anabas_testudineus
ENSAMXG00000012409	sltm	92	51.172	ENSAPLG00000013025	SLTM	99	46.802	Anas_platyrhynchos
ENSAMXG00000012409	sltm	95	50.607	ENSACAG00000015120	SLTM	97	49.953	Anolis_carolinensis
ENSAMXG00000012409	sltm	95	51.646	ENSANAG00000037031	SLTM	98	51.872	Aotus_nancymaae
ENSAMXG00000012409	sltm	96	62.877	ENSACLG00000002523	sltm	99	60.253	Astatotilapia_calliptera
ENSAMXG00000012409	sltm	96	52.526	ENSBTAG00000011319	SLTM	98	53.482	Bos_taurus
ENSAMXG00000012409	sltm	95	51.646	ENSCJAG00000020395	SLTM	98	50.328	Callithrix_jacchus
ENSAMXG00000012409	sltm	95	52.327	ENSCAFG00000016586	SLTM	98	52.457	Canis_familiaris
ENSAMXG00000012409	sltm	95	52.816	ENSCAFG00020011253	SLTM	98	51.834	Canis_lupus_dingo
ENSAMXG00000012409	sltm	95	52.947	ENSCHIG00000008780	SLTM	98	52.991	Capra_hircus
ENSAMXG00000012409	sltm	91	51.064	ENSTSYG00000013581	SLTM	94	47.977	Carlito_syrichta
ENSAMXG00000012409	sltm	67	56.594	ENSCAPG00000013326	SLTM	78	56.370	Cavia_aperea
ENSAMXG00000012409	sltm	83	53.656	ENSCPOG00000026109	SLTM	98	54.047	Cavia_porcellus
ENSAMXG00000012409	sltm	95	51.740	ENSCCAG00000022982	SLTM	98	50.328	Cebus_capucinus
ENSAMXG00000012409	sltm	95	52.072	ENSCATG00000030254	SLTM	98	49.625	Cercocebus_atys
ENSAMXG00000012409	sltm	89	50.800	ENSCLAG00000007160	SLTM	81	54.090	Chinchilla_lanigera
ENSAMXG00000012409	sltm	95	51.682	ENSCSAG00000012004	SLTM	98	48.000	Chlorocebus_sabaeus
ENSAMXG00000012409	sltm	65	59.350	ENSCHOG00000001125	SLTM	69	63.776	Choloepus_hoffmanni
ENSAMXG00000012409	sltm	96	53.475	ENSCPBG00000006045	SLTM	99	51.509	Chrysemys_picta_bellii
ENSAMXG00000012409	sltm	91	50.870	ENSCANG00000043731	SLTM	99	46.821	Colobus_angolensis_palliatus
ENSAMXG00000012409	sltm	95	52.345	ENSCGRG00001022009	Sltm	98	47.615	Cricetulus_griseus_chok1gshd
ENSAMXG00000012409	sltm	91	51.848	ENSCGRG00000014806	Sltm	99	46.945	Cricetulus_griseus_crigri
ENSAMXG00000012409	sltm	93	59.230	ENSCSEG00000001618	sltm	94	55.599	Cynoglossus_semilaevis
ENSAMXG00000012409	sltm	96	75.787	ENSDARG00000052728	sltm	99	84.701	Danio_rerio
ENSAMXG00000012409	sltm	71	53.047	ENSDORG00000007463	Sltm	91	48.507	Dipodomys_ordii
ENSAMXG00000012409	sltm	95	51.786	ENSEASG00005006792	SLTM	98	50.094	Equus_asinus_asinus
ENSAMXG00000012409	sltm	95	51.692	ENSECAG00000011267	SLTM	98	52.734	Equus_caballus
ENSAMXG00000012409	sltm	83	51.880	ENSEEUG00000000580	SLTM	90	50.474	Erinaceus_europaeus
ENSAMXG00000012409	sltm	84	65.179	ENSELUG00000013388	sltm	74	66.170	Esox_lucius
ENSAMXG00000012409	sltm	95	54.405	ENSFCAG00000004826	SLTM	98	52.818	Felis_catus
ENSAMXG00000012409	sltm	91	52.199	ENSFALG00000012285	SLTM	99	47.911	Ficedula_albicollis
ENSAMXG00000012409	sltm	91	51.641	ENSFDAG00000018075	SLTM	99	48.173	Fukomys_damarensis
ENSAMXG00000012409	sltm	83	56.502	ENSFHEG00000014764	sltm	96	51.993	Fundulus_heteroclitus
ENSAMXG00000012409	sltm	96	60.000	ENSGACG00000015814	sltm	98	58.310	Gasterosteus_aculeatus
ENSAMXG00000012409	sltm	95	53.921	ENSGAGG00000021279	SLTM	97	52.220	Gopherus_agassizii
ENSAMXG00000012409	sltm	95	52.023	ENSGGOG00000015866	SLTM	98	49.672	Gorilla_gorilla
ENSAMXG00000012409	sltm	96	63.071	ENSHBUG00000012461	sltm	99	60.447	Haplochromis_burtoni
ENSAMXG00000012409	sltm	96	44.929	ENSHGLG00000015426	-	60	48.020	Heterocephalus_glaber_female
ENSAMXG00000012409	sltm	96	51.060	ENSHGLG00000018512	-	99	48.747	Heterocephalus_glaber_female
ENSAMXG00000012409	sltm	95	46.242	ENSHGLG00100001757	-	60	47.855	Heterocephalus_glaber_male
ENSAMXG00000012409	sltm	96	50.135	ENSHCOG00000003395	sltm	76	50.166	Hippocampus_comes
ENSAMXG00000012409	sltm	96	80.355	ENSIPUG00000023201	sltm	91	78.973	Ictalurus_punctatus
ENSAMXG00000012409	sltm	91	51.741	ENSSTOG00000000584	SLTM	99	48.127	Ictidomys_tridecemlineatus
ENSAMXG00000012409	sltm	95	50.800	ENSJJAG00000006970	Sltm	80	53.280	Jaculus_jaculus
ENSAMXG00000012409	sltm	96	57.170	ENSKMAG00000007570	sltm	99	56.019	Kryptolebias_marmoratus
ENSAMXG00000012409	sltm	96	59.764	ENSLBEG00000025472	sltm	99	57.018	Labrus_bergylta
ENSAMXG00000012409	sltm	96	52.222	ENSLACG00000005234	SLTM	78	55.530	Latimeria_chalumnae
ENSAMXG00000012409	sltm	96	64.752	ENSLOCG00000013629	sltm	99	62.109	Lepisosteus_oculatus
ENSAMXG00000012409	sltm	95	52.052	ENSLAFG00000017922	SLTM	68	65.417	Loxodonta_africana
ENSAMXG00000012409	sltm	95	52.072	ENSMFAG00000033354	SLTM	98	49.625	Macaca_fascicularis
ENSAMXG00000012409	sltm	95	52.072	ENSMMUG00000022200	SLTM	98	49.625	Macaca_mulatta
ENSAMXG00000012409	sltm	95	52.072	ENSMNEG00000025105	SLTM	98	49.625	Macaca_nemestrina
ENSAMXG00000012409	sltm	95	52.354	ENSMLEG00000043355	SLTM	98	49.437	Mandrillus_leucophaeus
ENSAMXG00000012409	sltm	96	63.235	ENSMAMG00000021391	sltm	99	62.173	Mastacembelus_armatus
ENSAMXG00000012409	sltm	96	62.877	ENSMZEG00005013839	sltm	99	60.253	Maylandia_zebra
ENSAMXG00000012409	sltm	88	52.516	ENSMGAG00000005313	SLTM	87	51.667	Meleagris_gallopavo
ENSAMXG00000012409	sltm	95	52.242	ENSMAUG00000014391	Sltm	97	50.097	Mesocricetus_auratus
ENSAMXG00000012409	sltm	95	51.974	ENSMICG00000013069	SLTM	98	51.564	Microcebus_murinus
ENSAMXG00000012409	sltm	95	52.207	ENSMOCG00000012419	Sltm	98	47.952	Microtus_ochrogaster
ENSAMXG00000012409	sltm	96	61.220	ENSMMOG00000016470	sltm	99	58.043	Mola_mola
ENSAMXG00000012409	sltm	95	51.838	ENSMODG00000008794	-	77	54.745	Monodelphis_domestica
ENSAMXG00000012409	sltm	96	64.494	ENSMALG00000021474	sltm	99	63.919	Monopterus_albus
ENSAMXG00000012409	sltm	56	45.652	ENSMUSG00000032212	Sltm	98	49.905	Mus_musculus
ENSAMXG00000012409	sltm	93	50.956	ENSMPUG00000004229	SLTM	78	53.712	Mustela_putorius_furo
ENSAMXG00000012409	sltm	96	58.984	ENSNBRG00000010183	sltm	53	59.125	Neolamprologus_brichardi
ENSAMXG00000012409	sltm	95	52.166	ENSNLEG00000011440	SLTM	98	49.671	Nomascus_leucogenys
ENSAMXG00000012409	sltm	80	50.462	ENSMEUG00000015230	SLTM	77	48.478	Notamacropus_eugenii
ENSAMXG00000012409	sltm	92	50.963	ENSODEG00000017077	SLTM	81	53.900	Octodon_degus
ENSAMXG00000012409	sltm	96	63.663	ENSONIG00000005838	sltm	99	60.641	Oreochromis_niloticus
ENSAMXG00000012409	sltm	84	52.670	ENSOCUG00000003327	SLTM	99	51.128	Oryctolagus_cuniculus
ENSAMXG00000012409	sltm	96	57.859	ENSORLG00000008161	sltm	99	56.589	Oryzias_latipes
ENSAMXG00000012409	sltm	96	58.251	ENSORLG00020008903	sltm	99	56.534	Oryzias_latipes_hni
ENSAMXG00000012409	sltm	96	57.704	ENSORLG00015007103	sltm	99	56.438	Oryzias_latipes_hsok
ENSAMXG00000012409	sltm	89	58.526	ENSOMEG00000002041	sltm	98	55.992	Oryzias_melastigma
ENSAMXG00000012409	sltm	95	51.869	ENSOGAG00000011297	SLTM	98	49.025	Otolemur_garnettii
ENSAMXG00000012409	sltm	87	51.731	ENSOARG00000020844	SLTM	98	51.914	Ovis_aries
ENSAMXG00000012409	sltm	95	51.372	ENSPPAG00000029308	SLTM	98	49.342	Pan_paniscus
ENSAMXG00000012409	sltm	95	53.221	ENSPPRG00000012400	SLTM	98	50.093	Panthera_pardus
ENSAMXG00000012409	sltm	91	52.381	ENSPTIG00000021933	SLTM	94	48.792	Panthera_tigris_altaica
ENSAMXG00000012409	sltm	95	52.117	ENSPTRG00000007121	SLTM	98	49.672	Pan_troglodytes
ENSAMXG00000012409	sltm	95	50.851	ENSPANG00000017193	SLTM	98	48.636	Papio_anubis
ENSAMXG00000012409	sltm	90	72.479	ENSPKIG00000022760	sltm	99	67.055	Paramormyrops_kingsleyae
ENSAMXG00000012409	sltm	95	51.932	ENSPSIG00000005489	SLTM	97	47.383	Pelodiscus_sinensis
ENSAMXG00000012409	sltm	88	55.866	ENSPMGG00000006037	sltm	99	51.929	Periophthalmus_magnuspinnatus
ENSAMXG00000012409	sltm	95	52.577	ENSPCIG00000028356	SLTM	74	57.053	Phascolarctos_cinereus
ENSAMXG00000012409	sltm	95	63.158	ENSPFOG00000004372	sltm	99	58.407	Poecilia_formosa
ENSAMXG00000012409	sltm	96	59.256	ENSPLAG00000008000	sltm	99	58.719	Poecilia_latipinna
ENSAMXG00000012409	sltm	96	59.295	ENSPMEG00000006047	sltm	99	58.489	Poecilia_mexicana
ENSAMXG00000012409	sltm	96	59.784	ENSPREG00000023236	sltm	99	58.546	Poecilia_reticulata
ENSAMXG00000012409	sltm	95	50.794	ENSPPYG00000006515	SLTM	98	47.119	Pongo_abelii
ENSAMXG00000012409	sltm	96	45.906	ENSPCAG00000013482	SLTM	81	76.316	Procavia_capensis
ENSAMXG00000012409	sltm	95	53.252	ENSPCOG00000010624	SLTM	98	50.375	Propithecus_coquereli
ENSAMXG00000012409	sltm	95	50.655	ENSPVAG00000015056	SLTM	81	76.316	Pteropus_vampyrus
ENSAMXG00000012409	sltm	96	63.071	ENSPNYG00000013893	sltm	99	60.447	Pundamilia_nyererei
ENSAMXG00000012409	sltm	96	86.037	ENSPNAG00000020563	sltm	98	86.083	Pygocentrus_nattereri
ENSAMXG00000012409	sltm	91	52.200	ENSRBIG00000029226	SLTM	99	50.297	Rhinopithecus_bieti
ENSAMXG00000012409	sltm	95	52.418	ENSRROG00000045301	SLTM	98	51.538	Rhinopithecus_roxellana
ENSAMXG00000012409	sltm	95	53.616	ENSSBOG00000018883	SLTM	98	50.763	Saimiri_boliviensis_boliviensis
ENSAMXG00000012409	sltm	91	52.089	ENSSHAG00000015395	SLTM	80	56.257	Sarcophilus_harrisii
ENSAMXG00000012409	sltm	96	61.851	ENSSMAG00000000355	sltm	99	60.360	Scophthalmus_maximus
ENSAMXG00000012409	sltm	96	63.330	ENSSDUG00000018134	sltm	99	62.452	Seriola_dumerili
ENSAMXG00000012409	sltm	96	63.873	ENSSLDG00000013907	sltm	99	62.029	Seriola_lalandi_dorsalis
ENSAMXG00000012409	sltm	96	65.114	ENSSPAG00000008130	sltm	99	63.203	Stegastes_partitus
ENSAMXG00000012409	sltm	95	52.467	ENSSSCG00000004592	SLTM	98	50.532	Sus_scrofa
ENSAMXG00000012409	sltm	87	52.497	ENSTGUG00000006017	SLTM	85	51.564	Taeniopygia_guttata
ENSAMXG00000012409	sltm	84	56.663	ENSTRUG00000017767	sltm	89	56.045	Takifugu_rubripes
ENSAMXG00000012409	sltm	95	52.622	ENSTNIG00000009334	sltm	99	51.442	Tetraodon_nigroviridis
ENSAMXG00000012409	sltm	88	51.477	ENSTBEG00000000945	SLTM	81	51.049	Tupaia_belangeri
ENSAMXG00000012409	sltm	96	52.680	ENSTTRG00000005246	SLTM	98	49.301	Tursiops_truncatus
ENSAMXG00000012409	sltm	79	56.440	ENSUAMG00000025901	SLTM	99	54.322	Ursus_americanus
ENSAMXG00000012409	sltm	93	52.166	ENSUMAG00000023678	SLTM	99	55.297	Ursus_maritimus
ENSAMXG00000012409	sltm	95	52.292	ENSVVUG00000001450	SLTM	98	49.767	Vulpes_vulpes
ENSAMXG00000012409	sltm	96	59.941	ENSXMAG00000014466	sltm	99	58.691	Xiphophorus_maculatus