EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000012438 (Gene tree)
Gene ID: 103024644
Gene Symbol: tysnd1
Alias: wu:fb14b12
Full Name: trypsin domain containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9536 bases
Position: chr25:18287735-18297270
Accession: 103024644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029711	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012780	-	3700	XM_007249506	ENSAMXP00000012780	520 (aa)	XP_007249568	W5KYW8
ENSAMXT00000031262	-	366	-	ENSAMXP00000029711	121 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000012438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000012438	tysnd1	76	31.522	ENSAMXG00000011059	arl5a	51	30.435
ENSAMXG00000012438	tysnd1	80	35.052	ENSAMXG00000031467	arf4a	54	35.052
ENSAMXG00000012438	tysnd1	83	34.951	ENSAMXG00000035902	ARL6	55	34.951
ENSAMXG00000012438	tysnd1	80	34.021	ENSAMXG00000004249	-	54	34.021
ENSAMXG00000012438	tysnd1	89	32.407	ENSAMXG00000018516	arl3l2	58	32.407
ENSAMXG00000012438	tysnd1	80	34.021	ENSAMXG00000038224	-	54	34.021
ENSAMXG00000012438	tysnd1	74	34.831	ENSAMXG00000010445	arl8	50	34.831
ENSAMXG00000012438	tysnd1	95	30.172	ENSAMXG00000030683	arl8ba	58	30.172
ENSAMXG00000012438	tysnd1	74	38.947	ENSAMXG00000025423	arl4ab	50	38.947
ENSAMXG00000012438	tysnd1	99	83.607	ENSAMXG00000018108	sar1b	88	83.607
ENSAMXG00000012438	tysnd1	86	32.407	ENSAMXG00000037720	arl3	58	32.407
ENSAMXG00000012438	tysnd1	81	35.294	ENSAMXG00000034370	-	60	34.545
ENSAMXG00000012438	tysnd1	80	34.021	ENSAMXG00000031774	ARF5	54	34.021
ENSAMXG00000012438	tysnd1	89	30.556	ENSAMXG00000031771	arl5c	59	30.556
ENSAMXG00000012438	tysnd1	86	33.654	ENSAMXG00000019845	arf1	57	33.654
ENSAMXG00000012438	tysnd1	96	31.624	ENSAMXG00000039062	arl8a	58	31.624
ENSAMXG00000012438	tysnd1	78	42.708	ENSAMXG00000024897	-	51	42.708
ENSAMXG00000012438	tysnd1	91	34.545	ENSAMXG00000011499	arl2	60	34.545
ENSAMXG00000012438	tysnd1	83	38.000	ENSAMXG00000019160	arl3l1	53	38.000
ENSAMXG00000012438	tysnd1	89	34.259	ENSAMXG00000035742	arf2a	59	34.259
ENSAMXG00000012438	tysnd1	74	33.708	ENSAMXG00000043381	zgc:110197	52	33.708
ENSAMXG00000012438	tysnd1	98	30.000	ENSAMXG00000032775	arl8bb	60	30.000
ENSAMXG00000012438	tysnd1	80	35.052	ENSAMXG00000037485	arf2b	56	35.052
ENSAMXG00000012438	tysnd1	77	33.333	ENSAMXG00000021056	arl1	53	33.333
ENSAMXG00000012438	tysnd1	98	82.353	ENSAMXG00000034192	-	80	85.088
ENSAMXG00000012438	tysnd1	78	38.384	ENSAMXG00000024926	arl4cb	52	38.384
ENSAMXG00000012438	tysnd1	73	32.222	ENSAMXG00000012281	arl11	51	32.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012438	tysnd1	98	82.353	ENSCAFG00000014026	TYSND1	60	82.353	Canis_familiaris
ENSAMXG00000012438	tysnd1	98	84.034	ENSIPUG00000024669	SAR1B	89	85.345	Ictalurus_punctatus