EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012525 (Gene tree)
Gene ID: 103021457
Gene Symbol: rpl7a
Alias: wu:fa95b03|zgc:73183|zgc:86667
Full Name: ribosomal protein L7a
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5114 bases
Position: chrAPWO02000033.1:332679-337792
Accession: 103021457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052785	Ribosomal_L7Ae	PF01248.26	1.3e-23	1	1
ENSAMXP00000055077	Ribosomal_L7Ae	PF01248.26	1.4e-23	1	1
ENSAMXP00000012887	Ribosomal_L7Ae	PF01248.26	1.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012887	-	2533	XM_007256966	ENSAMXP00000012887	274 (aa)	XP_007257028	W5KZ75
ENSAMXT00000031578	-	2527	-	ENSAMXP00000055077	272 (aa)	-	-
ENSAMXT00000038528	-	2509	XM_007256965	ENSAMXP00000052785	266 (aa)	XP_007257027	UPI000440B28A

Gene Model

Click here to download ENSAMXG00000012525's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012525's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012525	rpl7a	94	90.040	ENSAPLG00000005247	RPL7A	93	90.040	Anas_platyrhynchos
ENSAMXG00000012525	rpl7a	100	75.188	ENSANAG00000035965	-	94	74.104	Aotus_nancymaae
ENSAMXG00000012525	rpl7a	55	85.034	ENSANAG00000021362	-	97	85.034	Aotus_nancymaae
ENSAMXG00000012525	rpl7a	73	84.536	ENSBTAG00000047286	-	85	84.536	Bos_taurus
ENSAMXG00000012525	rpl7a	88	81.277	ENSCJAG00000048127	-	94	80.478	Callithrix_jacchus
ENSAMXG00000012525	rpl7a	55	85.714	ENSCJAG00000044259	-	97	85.714	Callithrix_jacchus
ENSAMXG00000012525	rpl7a	55	85.034	ENSCJAG00000040821	-	100	85.034	Callithrix_jacchus
ENSAMXG00000012525	rpl7a	98	79.389	ENSCHIG00000023018	-	92	79.283	Capra_hircus
ENSAMXG00000012525	rpl7a	55	70.548	ENSTSYG00000029336	-	100	70.548	Carlito_syrichta
ENSAMXG00000012525	rpl7a	100	79.323	ENSCCAG00000033718	-	94	78.486	Cebus_capucinus
ENSAMXG00000012525	rpl7a	55	83.448	ENSCATG00000031343	-	96	83.448	Cercocebus_atys
ENSAMXG00000012525	rpl7a	55	85.714	ENSCATG00000032659	-	100	85.714	Cercocebus_atys
ENSAMXG00000012525	rpl7a	94	81.200	ENSCSAG00000018506	-	94	81.200	Chlorocebus_sabaeus
ENSAMXG00000012525	rpl7a	92	77.959	ENSCSAG00000005053	-	94	77.689	Chlorocebus_sabaeus
ENSAMXG00000012525	rpl7a	100	87.594	ENSCSAG00000019115	-	94	87.649	Chlorocebus_sabaeus
ENSAMXG00000012525	rpl7a	93	75.000	ENSCSAG00000018485	-	94	74.900	Chlorocebus_sabaeus
ENSAMXG00000012525	rpl7a	94	91.633	ENSCPBG00000021161	-	94	91.633	Chrysemys_picta_bellii
ENSAMXG00000012525	rpl7a	100	83.835	ENSCGRG00001020617	-	94	83.600	Cricetulus_griseus_chok1gshd
ENSAMXG00000012525	rpl7a	100	78.947	ENSCGRG00000003429	-	94	78.088	Cricetulus_griseus_crigri
ENSAMXG00000012525	rpl7a	100	93.985	ENSDARG00000019230	rpl7a	94	94.024	Danio_rerio
ENSAMXG00000012525	rpl7a	100	57.143	ENSDNOG00000030713	-	93	56.574	Dasypus_novemcinctus
ENSAMXG00000012525	rpl7a	79	74.882	ENSDORG00000027559	-	89	74.882	Dipodomys_ordii
ENSAMXG00000012525	rpl7a	98	68.321	ENSEBUG00000015826	rpl7a	94	68.254	Eptatretus_burgeri
ENSAMXG00000012525	rpl7a	100	92.105	ENSELUG00000023023	rpl7a	94	92.032	Esox_lucius
ENSAMXG00000012525	rpl7a	71	67.725	ENSFCAG00000029566	-	92	67.725	Felis_catus
ENSAMXG00000012525	rpl7a	62	64.024	ENSFCAG00000026737	-	95	64.024	Felis_catus
ENSAMXG00000012525	rpl7a	94	90.438	ENSFALG00000001502	-	83	90.438	Ficedula_albicollis
ENSAMXG00000012525	rpl7a	94	90.837	ENSGAGG00000010277	-	91	90.837	Gopherus_agassizii
ENSAMXG00000012525	rpl7a	54	84.247	ENSGGOG00000025516	-	95	84.247	Gorilla_gorilla
ENSAMXG00000012525	rpl7a	57	82.895	ENSGGOG00000023680	-	100	82.895	Gorilla_gorilla
ENSAMXG00000012525	rpl7a	96	80.000	ENSGGOG00000026585	-	99	77.612	Gorilla_gorilla
ENSAMXG00000012525	rpl7a	94	69.200	ENSHGLG00000018482	-	93	69.200	Heterocephalus_glaber_female
ENSAMXG00000012525	rpl7a	94	89.641	ENSHGLG00000013590	RPL7A	94	89.641	Heterocephalus_glaber_female
ENSAMXG00000012525	rpl7a	94	70.400	ENSHGLG00000012167	-	100	70.306	Heterocephalus_glaber_female
ENSAMXG00000012525	rpl7a	94	70.400	ENSHGLG00100007133	-	100	70.306	Heterocephalus_glaber_male
ENSAMXG00000012525	rpl7a	94	89.641	ENSHGLG00100007783	RPL7A	94	89.641	Heterocephalus_glaber_male
ENSAMXG00000012525	rpl7a	94	69.200	ENSHGLG00100004197	-	93	69.200	Heterocephalus_glaber_male
ENSAMXG00000012525	rpl7a	100	96.241	ENSIPUG00000008146	rpl7a	100	96.241	Ictalurus_punctatus
ENSAMXG00000012525	rpl7a	96	69.020	ENSSTOG00000031997	-	94	68.526	Ictidomys_tridecemlineatus
ENSAMXG00000012525	rpl7a	100	68.889	ENSJJAG00000022569	-	94	68.627	Jaculus_jaculus
ENSAMXG00000012525	rpl7a	94	67.470	ENSJJAG00000012899	-	98	67.213	Jaculus_jaculus
ENSAMXG00000012525	rpl7a	100	76.316	ENSJJAG00000024026	-	94	75.299	Jaculus_jaculus
ENSAMXG00000012525	rpl7a	56	72.667	ENSJJAG00000016802	-	99	72.667	Jaculus_jaculus
ENSAMXG00000012525	rpl7a	94	74.104	ENSJJAG00000014376	-	94	74.104	Jaculus_jaculus
ENSAMXG00000012525	rpl7a	95	88.889	ENSLACG00000018224	rpl7a	91	88.845	Latimeria_chalumnae
ENSAMXG00000012525	rpl7a	94	89.641	ENSLAFG00000006436	-	95	90.722	Loxodonta_africana
ENSAMXG00000012525	rpl7a	94	88.845	ENSMFAG00000027988	-	94	88.845	Macaca_fascicularis
ENSAMXG00000012525	rpl7a	94	84.064	ENSMFAG00000044607	-	94	84.064	Macaca_fascicularis
ENSAMXG00000012525	rpl7a	57	83.553	ENSMMUG00000012379	-	100	83.553	Macaca_mulatta
ENSAMXG00000012525	rpl7a	94	84.462	ENSMMUG00000049182	-	100	82.895	Macaca_mulatta
ENSAMXG00000012525	rpl7a	54	86.111	ENSMNEG00000037496	-	99	86.111	Macaca_nemestrina
ENSAMXG00000012525	rpl7a	100	88.346	ENSMNEG00000005027	-	94	88.048	Macaca_nemestrina
ENSAMXG00000012525	rpl7a	94	85.600	ENSMNEG00000025946	-	94	85.600	Macaca_nemestrina
ENSAMXG00000012525	rpl7a	94	82.800	ENSMLEG00000012582	-	94	82.072	Mandrillus_leucophaeus
ENSAMXG00000012525	rpl7a	55	71.429	ENSMAUG00000019197	-	97	71.429	Mesocricetus_auratus
ENSAMXG00000012525	rpl7a	55	84.247	ENSMICG00000026491	-	95	84.247	Microcebus_murinus
ENSAMXG00000012525	rpl7a	94	87.251	ENSMOCG00000008541	-	94	87.251	Microtus_ochrogaster
ENSAMXG00000012525	rpl7a	96	57.812	ENSMPUG00000009401	-	92	58.000	Mustela_putorius_furo
ENSAMXG00000012525	rpl7a	99	67.170	ENSMPUG00000003699	-	93	66.932	Mustela_putorius_furo
ENSAMXG00000012525	rpl7a	52	82.734	ENSMPUG00000012398	-	99	82.734	Mustela_putorius_furo
ENSAMXG00000012525	rpl7a	100	69.925	ENSMPUG00000017429	-	93	70.120	Mustela_putorius_furo
ENSAMXG00000012525	rpl7a	94	61.446	ENSMPUG00000012594	-	94	61.446	Mustela_putorius_furo
ENSAMXG00000012525	rpl7a	94	78.400	ENSNLEG00000030063	-	94	77.689	Nomascus_leucogenys
ENSAMXG00000012525	rpl7a	100	87.970	ENSNLEG00000030504	-	94	87.649	Nomascus_leucogenys
ENSAMXG00000012525	rpl7a	57	80.921	ENSNLEG00000030901	-	100	80.921	Nomascus_leucogenys
ENSAMXG00000012525	rpl7a	94	90.438	ENSMEUG00000014550	-	94	90.438	Notamacropus_eugenii
ENSAMXG00000012525	rpl7a	93	90.726	ENSOANG00000007060	-	89	90.558	Ornithorhynchus_anatinus
ENSAMXG00000012525	rpl7a	87	66.379	ENSOCUG00000025450	-	99	66.379	Oryctolagus_cuniculus
ENSAMXG00000012525	rpl7a	94	84.861	ENSOCUG00000022874	-	94	84.861	Oryctolagus_cuniculus
ENSAMXG00000012525	rpl7a	83	67.873	ENSOCUG00000027027	-	100	67.873	Oryctolagus_cuniculus
ENSAMXG00000012525	rpl7a	98	51.341	ENSOGAG00000029360	-	95	53.200	Otolemur_garnettii
ENSAMXG00000012525	rpl7a	100	83.835	ENSOGAG00000007682	-	94	83.665	Otolemur_garnettii
ENSAMXG00000012525	rpl7a	98	84.733	ENSOARG00000004560	-	93	84.861	Ovis_aries
ENSAMXG00000012525	rpl7a	94	83.071	ENSOARG00000003677	-	94	83.071	Ovis_aries
ENSAMXG00000012525	rpl7a	100	80.224	ENSPPAG00000030172	-	95	84.932	Pan_paniscus
ENSAMXG00000012525	rpl7a	98	78.244	ENSPPAG00000029689	-	96	78.884	Pan_paniscus
ENSAMXG00000012525	rpl7a	96	80.000	ENSPPAG00000037938	-	99	77.340	Pan_paniscus
ENSAMXG00000012525	rpl7a	55	84.354	ENSPPAG00000035063	-	97	84.354	Pan_paniscus
ENSAMXG00000012525	rpl7a	55	66.438	ENSPPRG00000008233	-	100	64.474	Panthera_pardus
ENSAMXG00000012525	rpl7a	92	88.446	ENSPTRG00000029310	-	94	88.446	Pan_troglodytes
ENSAMXG00000012525	rpl7a	55	83.673	ENSPTRG00000049410	-	97	83.673	Pan_troglodytes
ENSAMXG00000012525	rpl7a	98	78.244	ENSPTRG00000047886	-	96	78.884	Pan_troglodytes
ENSAMXG00000012525	rpl7a	96	80.784	ENSPTRG00000051913	-	94	80.478	Pan_troglodytes
ENSAMXG00000012525	rpl7a	68	85.000	ENSPTRG00000044655	-	99	85.000	Pan_troglodytes
ENSAMXG00000012525	rpl7a	55	86.897	ENSPANG00000003750	-	96	86.897	Papio_anubis
ENSAMXG00000012525	rpl7a	55	85.034	ENSPANG00000034498	-	100	85.034	Papio_anubis
ENSAMXG00000012525	rpl7a	55	83.673	ENSPEMG00000013592	-	100	83.673	Peromyscus_maniculatus_bairdii
ENSAMXG00000012525	rpl7a	100	77.154	ENSPCIG00000026434	-	94	77.291	Phascolarctos_cinereus
ENSAMXG00000012525	rpl7a	94	78.884	ENSPCOG00000004337	-	97	76.847	Propithecus_coquereli
ENSAMXG00000012525	rpl7a	96	93.333	ENSPNAG00000029194	rpl7a	100	94.558	Pygocentrus_nattereri
ENSAMXG00000012525	rpl7a	98	75.191	ENSRNOG00000014425	AABR07054456.1	95	74.900	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	94	86.454	ENSRNOG00000033652	AABR07045321.1	94	86.454	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	94	84.800	ENSRNOG00000031902	AABR07027819.1	94	84.800	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	100	75.940	ENSRNOG00000022718	AC094246.2	94	75.697	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	94	86.454	ENSRNOG00000028826	AC128901.1	94	86.454	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	94	83.267	ENSRNOG00000029310	AABR07049918.1	94	83.267	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	100	86.466	ENSRNOG00000029130	AABR07057586.1	94	86.454	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	96	85.490	ENSRNOG00000031532	AABR07018167.1	94	85.259	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	98	87.308	ENSRNOG00000029423	AABR07052519.1	94	87.251	Rattus_norvegicus
ENSAMXG00000012525	rpl7a	94	84.861	ENSRBIG00000010998	-	94	84.861	Rhinopithecus_bieti
ENSAMXG00000012525	rpl7a	54	85.417	ENSRBIG00000007002	-	92	85.417	Rhinopithecus_bieti
ENSAMXG00000012525	rpl7a	88	80.851	ENSRBIG00000037343	-	91	80.000	Rhinopithecus_bieti
ENSAMXG00000012525	rpl7a	55	85.616	ENSRROG00000035341	-	95	85.616	Rhinopithecus_roxellana
ENSAMXG00000012525	rpl7a	88	80.851	ENSRROG00000041577	-	91	80.000	Rhinopithecus_roxellana
ENSAMXG00000012525	rpl7a	93	73.387	ENSSBOG00000033255	-	94	72.908	Saimiri_boliviensis_boliviensis
ENSAMXG00000012525	rpl7a	91	43.802	ENSSSCG00000034232	-	93	59.459	Sus_scrofa
ENSAMXG00000012525	rpl7a	94	90.438	ENSTGUG00000005463	-	93	90.438	Taeniopygia_guttata
ENSAMXG00000012525	rpl7a	94	91.633	ENSTNIG00000007501	rpl7a	93	91.633	Tetraodon_nigroviridis
ENSAMXG00000012525	rpl7a	55	67.123	ENSTBEG00000003344	-	97	67.123	Tupaia_belangeri