EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000012533 (Gene tree)
Gene ID: 103023620
Gene Symbol: -
Alias: -
Full Name: threonine--tRNA ligase%2C cytoplasmic-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 19171 bases
Position: chr10:21950888-21970058
Accession: 103023620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012886	tRNA_SAD	PF07973.14	5.6e-05	1	1
ENSAMXP00000012886	HGTP_anticodon	PF03129.20	1.1e-18	1	1
ENSAMXP00000012886	tRNA-synt_2b	PF00587.25	1.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012886	-	2964	XM_007254527	ENSAMXP00000012886	691 (aa)	XP_007254589	W5KZ74

Gene Model

Click here to download ENSAMXG00000012533's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000012533	-	96	52.811	ENSAMXG00000014068	tars	93	52.811
ENSAMXG00000012533	-	96	52.071	ENSAMXG00000020852	tarsl2	79	52.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012533	-	94	52.861	ENSG00000185418	TARSL2	97	46.207	Homo_sapiens
ENSAMXG00000012533	-	61	73.412	ENSAPOG00000015706	-	100	73.412	Acanthochromis_polyacanthus
ENSAMXG00000012533	-	94	53.253	ENSAMEG00000003074	TARSL2	85	53.253	Ailuropoda_melanoleuca
ENSAMXG00000012533	-	64	81.674	ENSACIG00000007759	-	95	81.693	Amphilophus_citrinellus
ENSAMXG00000012533	-	62	79.206	ENSAOCG00000012359	-	99	79.206	Amphiprion_ocellaris
ENSAMXG00000012533	-	61	75.529	ENSAPEG00000007512	-	100	75.529	Amphiprion_percula
ENSAMXG00000012533	-	95	73.445	ENSATEG00000023568	-	95	73.445	Anabas_testudineus
ENSAMXG00000012533	-	94	53.647	ENSAPLG00000008485	TARSL2	91	53.647	Anas_platyrhynchos
ENSAMXG00000012533	-	95	51.574	ENSACAG00000003076	-	98	51.574	Anolis_carolinensis
ENSAMXG00000012533	-	94	42.314	ENSACAG00000000199	TARSL2	86	42.314	Anolis_carolinensis
ENSAMXG00000012533	-	94	50.000	ENSANAG00000020687	TARSL2	84	50.965	Aotus_nancymaae
ENSAMXG00000012533	-	97	73.145	ENSACLG00000020262	-	97	73.145	Astatotilapia_calliptera
ENSAMXG00000012533	-	95	51.267	ENSBTAG00000007651	TARSL2	84	51.267	Bos_taurus
ENSAMXG00000012533	-	94	55.263	ENSCJAG00000017350	TARSL2	80	55.263	Callithrix_jacchus
ENSAMXG00000012533	-	94	52.941	ENSCAFG00000010453	TARSL2	83	52.941	Canis_familiaris
ENSAMXG00000012533	-	95	52.687	ENSCAFG00020020868	TARSL2	97	55.150	Canis_lupus_dingo
ENSAMXG00000012533	-	85	50.836	ENSCHIG00000015264	TARSL2	82	50.836	Capra_hircus
ENSAMXG00000012533	-	94	51.807	ENSTSYG00000004538	TARSL2	94	51.807	Carlito_syrichta
ENSAMXG00000012533	-	88	48.706	ENSCAPG00000004815	TARSL2	92	48.706	Cavia_aperea
ENSAMXG00000012533	-	94	52.410	ENSCPOG00000008850	TARSL2	94	52.410	Cavia_porcellus
ENSAMXG00000012533	-	94	52.711	ENSCCAG00000030068	TARSL2	81	53.859	Cebus_capucinus
ENSAMXG00000012533	-	94	52.410	ENSCATG00000037383	TARSL2	85	52.410	Cercocebus_atys
ENSAMXG00000012533	-	94	52.560	ENSCLAG00000016873	TARSL2	86	52.560	Chinchilla_lanigera
ENSAMXG00000012533	-	94	52.711	ENSCSAG00000016828	TARSL2	83	52.711	Chlorocebus_sabaeus
ENSAMXG00000012533	-	88	51.364	ENSCHOG00000001319	TARSL2	95	51.364	Choloepus_hoffmanni
ENSAMXG00000012533	-	94	52.959	ENSCPBG00000010792	TARSL2	83	52.959	Chrysemys_picta_bellii
ENSAMXG00000012533	-	94	52.711	ENSCANG00000035438	TARSL2	93	52.711	Colobus_angolensis_palliatus
ENSAMXG00000012533	-	94	52.187	ENSCGRG00001020827	Tarsl2	84	52.187	Cricetulus_griseus_chok1gshd
ENSAMXG00000012533	-	94	52.187	ENSCGRG00000011398	Tarsl2	92	52.187	Cricetulus_griseus_crigri
ENSAMXG00000012533	-	95	71.017	ENSCSEG00000002562	-	100	78.454	Cynoglossus_semilaevis
ENSAMXG00000012533	-	62	80.420	ENSCVAG00000009253	-	100	80.046	Cyprinodon_variegatus
ENSAMXG00000012533	-	61	82.938	ENSDARG00000075385	LO017852.1	99	82.938	Danio_rerio
ENSAMXG00000012533	-	94	51.054	ENSDNOG00000046161	TARSL2	95	51.054	Dasypus_novemcinctus
ENSAMXG00000012533	-	94	53.253	ENSDORG00000009653	Tarsl2	94	53.253	Dipodomys_ordii
ENSAMXG00000012533	-	94	53.163	ENSEASG00005017718	TARSL2	83	53.163	Equus_asinus_asinus
ENSAMXG00000012533	-	94	53.163	ENSECAG00000024315	TARSL2	83	53.163	Equus_caballus
ENSAMXG00000012533	-	86	55.167	ENSEEUG00000014117	TARSL2	98	55.167	Erinaceus_europaeus
ENSAMXG00000012533	-	97	72.578	ENSELUG00000013552	-	97	72.578	Esox_lucius
ENSAMXG00000012533	-	94	52.711	ENSFCAG00000008836	TARSL2	82	53.537	Felis_catus
ENSAMXG00000012533	-	94	53.495	ENSFALG00000012444	TARSL2	89	53.495	Ficedula_albicollis
ENSAMXG00000012533	-	94	51.061	ENSFDAG00000002767	TARSL2	94	51.061	Fukomys_damarensis
ENSAMXG00000012533	-	64	80.587	ENSFHEG00000021877	-	81	80.587	Fundulus_heteroclitus
ENSAMXG00000012533	-	95	71.429	ENSGMOG00000006184	-	95	71.429	Gadus_morhua
ENSAMXG00000012533	-	96	52.671	ENSGALG00000043416	-	95	63.814	Gallus_gallus
ENSAMXG00000012533	-	94	53.253	ENSGALG00000003985	TARSL2	84	53.253	Gallus_gallus
ENSAMXG00000012533	-	98	72.083	ENSGAFG00000012691	-	98	72.083	Gambusia_affinis
ENSAMXG00000012533	-	95	74.052	ENSGACG00000011734	-	96	74.052	Gasterosteus_aculeatus
ENSAMXG00000012533	-	94	52.807	ENSGAGG00000010775	TARSL2	83	52.807	Gopherus_agassizii
ENSAMXG00000012533	-	94	52.711	ENSGGOG00000007839	TARSL2	86	52.711	Gorilla_gorilla
ENSAMXG00000012533	-	97	73.294	ENSHBUG00000003411	-	97	73.763	Haplochromis_burtoni
ENSAMXG00000012533	-	94	52.036	ENSHGLG00000011618	TARSL2	84	52.036	Heterocephalus_glaber_female
ENSAMXG00000012533	-	94	52.036	ENSHGLG00100016769	TARSL2	94	52.036	Heterocephalus_glaber_male
ENSAMXG00000012533	-	99	67.147	ENSHCOG00000014119	-	99	67.147	Hippocampus_comes
ENSAMXG00000012533	-	61	80.896	ENSIPUG00000000099	-	100	81.368	Ictalurus_punctatus
ENSAMXG00000012533	-	94	53.163	ENSSTOG00000032725	TARSL2	84	53.163	Ictidomys_tridecemlineatus
ENSAMXG00000012533	-	97	73.551	ENSKMAG00000001354	-	97	73.551	Kryptolebias_marmoratus
ENSAMXG00000012533	-	61	78.118	ENSLBEG00000026238	-	100	78.118	Labrus_bergylta
ENSAMXG00000012533	-	94	52.861	ENSLAFG00000011941	TARSL2	98	52.861	Loxodonta_africana
ENSAMXG00000012533	-	94	52.259	ENSMFAG00000001902	TARSL2	83	52.259	Macaca_fascicularis
ENSAMXG00000012533	-	94	52.410	ENSMMUG00000000278	TARSL2	83	52.410	Macaca_mulatta
ENSAMXG00000012533	-	94	52.259	ENSMNEG00000034952	TARSL2	83	52.259	Macaca_nemestrina
ENSAMXG00000012533	-	94	52.410	ENSMLEG00000035535	TARSL2	94	52.410	Mandrillus_leucophaeus
ENSAMXG00000012533	-	97	73.294	ENSMAMG00000015032	-	97	73.294	Mastacembelus_armatus
ENSAMXG00000012533	-	97	73.145	ENSMZEG00005015989	-	97	73.145	Maylandia_zebra
ENSAMXG00000012533	-	87	61.272	ENSMGAG00000004951	TARSL2	97	61.272	Meleagris_gallopavo
ENSAMXG00000012533	-	85	60.263	ENSMAUG00000015756	Tarsl2	82	60.263	Mesocricetus_auratus
ENSAMXG00000012533	-	94	52.560	ENSMICG00000013039	TARSL2	96	52.560	Microcebus_murinus
ENSAMXG00000012533	-	96	52.600	ENSMOCG00000014909	Tarsl2	84	53.092	Microtus_ochrogaster
ENSAMXG00000012533	-	63	76.538	ENSMMOG00000016135	-	100	76.538	Mola_mola
ENSAMXG00000012533	-	94	51.360	ENSMODG00000011941	TARSL2	83	51.360	Monodelphis_domestica
ENSAMXG00000012533	-	95	73.445	ENSMALG00000007340	-	94	73.445	Monopterus_albus
ENSAMXG00000012533	-	94	52.489	MGP_CAROLIEiJ_G0029834	Tarsl2	84	52.489	Mus_caroli
ENSAMXG00000012533	-	94	52.338	ENSMUSG00000030515	Tarsl2	84	52.338	Mus_musculus
ENSAMXG00000012533	-	94	52.187	MGP_PahariEiJ_G0013059	Tarsl2	84	52.187	Mus_pahari
ENSAMXG00000012533	-	94	53.313	ENSMPUG00000011032	TARSL2	85	53.313	Mustela_putorius_furo
ENSAMXG00000012533	-	79	53.119	ENSMLUG00000024482	-	93	53.119	Myotis_lucifugus
ENSAMXG00000012533	-	94	51.807	ENSMLUG00000012870	-	83	51.807	Myotis_lucifugus
ENSAMXG00000012533	-	94	51.735	ENSNGAG00000020451	Tarsl2	83	51.735	Nannospalax_galili
ENSAMXG00000012533	-	96	74.063	ENSNBRG00000003429	-	97	74.063	Neolamprologus_brichardi
ENSAMXG00000012533	-	95	52.239	ENSNLEG00000000541	TARSL2	84	52.239	Nomascus_leucogenys
ENSAMXG00000012533	-	81	48.319	ENSMEUG00000002935	TARSL2	71	48.496	Notamacropus_eugenii
ENSAMXG00000012533	-	71	46.493	ENSOPRG00000002689	-	62	46.493	Ochotona_princeps
ENSAMXG00000012533	-	94	52.941	ENSODEG00000014454	TARSL2	90	50.279	Octodon_degus
ENSAMXG00000012533	-	96	73.393	ENSONIG00000006402	-	100	73.393	Oreochromis_niloticus
ENSAMXG00000012533	-	94	51.212	ENSOANG00000013263	TARSL2	98	51.212	Ornithorhynchus_anatinus
ENSAMXG00000012533	-	94	53.695	ENSOCUG00000010740	TARSL2	93	53.695	Oryctolagus_cuniculus
ENSAMXG00000012533	-	96	70.890	ENSORLG00000010391	-	95	70.890	Oryzias_latipes
ENSAMXG00000012533	-	97	70.579	ENSORLG00020008928	-	97	70.579	Oryzias_latipes_hni
ENSAMXG00000012533	-	97	70.579	ENSORLG00015014897	-	97	70.579	Oryzias_latipes_hsok
ENSAMXG00000012533	-	97	71.068	ENSOMEG00000009022	-	97	71.068	Oryzias_melastigma
ENSAMXG00000012533	-	94	52.115	ENSOGAG00000014311	TARSL2	82	52.115	Otolemur_garnettii
ENSAMXG00000012533	-	95	50.969	ENSOARG00000016573	TARSL2	95	50.969	Ovis_aries
ENSAMXG00000012533	-	94	52.560	ENSPPAG00000040066	TARSL2	96	52.560	Pan_paniscus
ENSAMXG00000012533	-	94	52.560	ENSPPRG00000017275	TARSL2	83	52.560	Panthera_pardus
ENSAMXG00000012533	-	94	52.560	ENSPTIG00000015184	TARSL2	83	52.560	Panthera_tigris_altaica
ENSAMXG00000012533	-	94	52.711	ENSPTRG00000007516	TARSL2	83	52.711	Pan_troglodytes
ENSAMXG00000012533	-	94	50.519	ENSPANG00000022401	TARSL2	83	50.519	Papio_anubis
ENSAMXG00000012533	-	98	71.259	ENSPKIG00000010658	-	96	80.340	Paramormyrops_kingsleyae
ENSAMXG00000012533	-	82	54.530	ENSPSIG00000008419	TARSL2	99	54.530	Pelodiscus_sinensis
ENSAMXG00000012533	-	63	78.522	ENSPMGG00000007785	-	99	78.522	Periophthalmus_magnuspinnatus
ENSAMXG00000012533	-	96	52.303	ENSPEMG00000019852	Tarsl2	91	52.303	Peromyscus_maniculatus_bairdii
ENSAMXG00000012533	-	94	51.813	ENSPCIG00000022481	TARSL2	82	51.813	Phascolarctos_cinereus
ENSAMXG00000012533	-	95	73.193	ENSPFOG00000013444	-	99	73.193	Poecilia_formosa
ENSAMXG00000012533	-	97	72.552	ENSPLAG00000018145	-	98	72.552	Poecilia_latipinna
ENSAMXG00000012533	-	97	72.552	ENSPMEG00000023625	-	98	72.552	Poecilia_mexicana
ENSAMXG00000012533	-	61	79.765	ENSPREG00000017312	-	100	79.765	Poecilia_reticulata
ENSAMXG00000012533	-	82	60.981	ENSPPYG00000006830	TARSL2	80	60.981	Pongo_abelii
ENSAMXG00000012533	-	87	50.082	ENSPCAG00000011132	TARSL2	76	50.082	Procavia_capensis
ENSAMXG00000012533	-	94	40.451	ENSPCOG00000026095	TARSL2	81	40.752	Propithecus_coquereli
ENSAMXG00000012533	-	95	39.820	ENSPVAG00000012240	TARSL2	83	39.820	Pteropus_vampyrus
ENSAMXG00000012533	-	97	73.145	ENSPNYG00000004232	-	97	73.145	Pundamilia_nyererei
ENSAMXG00000012533	-	100	87.844	ENSPNAG00000002308	-	100	87.844	Pygocentrus_nattereri
ENSAMXG00000012533	-	59	47.619	ENSRNOG00000024460	Tarsl2	76	47.619	Rattus_norvegicus
ENSAMXG00000012533	-	94	52.711	ENSRBIG00000035707	TARSL2	85	52.711	Rhinopithecus_bieti
ENSAMXG00000012533	-	94	52.560	ENSRROG00000029492	TARSL2	85	52.560	Rhinopithecus_roxellana
ENSAMXG00000012533	-	94	52.410	ENSSBOG00000029807	TARSL2	96	52.410	Saimiri_boliviensis_boliviensis
ENSAMXG00000012533	-	94	51.735	ENSSHAG00000010266	TARSL2	88	51.735	Sarcophilus_harrisii
ENSAMXG00000012533	-	95	72.796	ENSSFOG00015022086	tars2	95	72.796	Scleropages_formosus
ENSAMXG00000012533	-	95	74.052	ENSSMAG00000015682	-	96	74.052	Scophthalmus_maximus
ENSAMXG00000012533	-	62	82.009	ENSSDUG00000007180	-	99	82.009	Seriola_dumerili
ENSAMXG00000012533	-	62	81.967	ENSSLDG00000015367	-	100	81.967	Seriola_lalandi_dorsalis
ENSAMXG00000012533	-	59	65.441	ENSSPUG00000001523	TARSL2	98	63.830	Sphenodon_punctatus
ENSAMXG00000012533	-	96	71.084	ENSSPAG00000018887	-	96	71.084	Stegastes_partitus
ENSAMXG00000012533	-	92	51.932	ENSSSCG00000005781	TARSL2	99	51.208	Sus_scrofa
ENSAMXG00000012533	-	94	53.343	ENSTGUG00000005726	TARSL2	98	53.343	Taeniopygia_guttata
ENSAMXG00000012533	-	61	59.811	ENSTGUG00000004602	-	98	59.811	Taeniopygia_guttata
ENSAMXG00000012533	-	62	81.265	ENSTRUG00000015004	-	100	81.265	Takifugu_rubripes
ENSAMXG00000012533	-	95	68.778	ENSTNIG00000008060	-	96	68.778	Tetraodon_nigroviridis
ENSAMXG00000012533	-	70	57.062	ENSTBEG00000001134	-	72	57.062	Tupaia_belangeri
ENSAMXG00000012533	-	94	51.958	ENSTTRG00000016207	TARSL2	95	51.958	Tursiops_truncatus
ENSAMXG00000012533	-	95	52.553	ENSUMAG00000024371	TARSL2	99	55.476	Ursus_maritimus
ENSAMXG00000012533	-	94	53.092	ENSVVUG00000014742	TARSL2	96	53.092	Vulpes_vulpes
ENSAMXG00000012533	-	65	78.667	ENSXCOG00000019508	-	97	81.490	Xiphophorus_couchianus
ENSAMXG00000012533	-	95	72.838	ENSXMAG00000016382	-	95	72.838	Xiphophorus_maculatus