EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012546 (Gene tree)
Gene ID: 103047319
Gene Symbol: surf6
Alias: surf6l|zgc:64008
Full Name: surfeit 6
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4871 bases
Position: chrAPWO02000033.1:323553-328423
Accession: 103047319
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000012897	SURF6	PF04935.12	2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000012897	-	2753	XM_007256963	ENSAMXP00000012897	373 (aa)	XP_007257025	W5KZ85

Gene Model

Click here to download ENSAMXG00000012546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012546	surf6	99	41.623	ENSG00000148296	SURF6	99	42.820	Homo_sapiens
ENSAMXG00000012546	surf6	99	55.585	ENSAPOG00000021015	surf6	99	55.851	Acanthochromis_polyacanthus
ENSAMXG00000012546	surf6	99	37.922	ENSAMEG00000011733	SURF6	99	39.221	Ailuropoda_melanoleuca
ENSAMXG00000012546	surf6	99	55.236	ENSAOCG00000015839	surf6	99	54.856	Amphiprion_ocellaris
ENSAMXG00000012546	surf6	99	54.593	ENSAPEG00000022442	surf6	99	54.856	Amphiprion_percula
ENSAMXG00000012546	surf6	99	56.842	ENSATEG00000012640	surf6	99	56.842	Anabas_testudineus
ENSAMXG00000012546	surf6	89	44.444	ENSAPLG00000005069	SURF6	88	50.485	Anas_platyrhynchos
ENSAMXG00000012546	surf6	99	37.435	ENSANAG00000021046	SURF6	99	40.476	Aotus_nancymaae
ENSAMXG00000012546	surf6	99	53.476	ENSACLG00000027819	surf6	99	53.743	Astatotilapia_calliptera
ENSAMXG00000012546	surf6	99	40.476	ENSBTAG00000011554	SURF6	99	40.212	Bos_taurus
ENSAMXG00000012546	surf6	99	38.710	ENSCJAG00000017951	SURF6	99	40.426	Callithrix_jacchus
ENSAMXG00000012546	surf6	99	38.522	ENSCAFG00000019758	-	99	41.379	Canis_familiaris
ENSAMXG00000012546	surf6	99	35.904	ENSCAFG00000005159	-	99	35.433	Canis_familiaris
ENSAMXG00000012546	surf6	99	38.522	ENSCAFG00020001156	SURF6	99	41.379	Canis_lupus_dingo
ENSAMXG00000012546	surf6	99	39.096	ENSCHIG00000025220	SURF6	99	39.370	Capra_hircus
ENSAMXG00000012546	surf6	99	42.287	ENSTSYG00000008431	SURF6	99	42.287	Carlito_syrichta
ENSAMXG00000012546	surf6	70	49.425	ENSCAPG00000010696	SURF6	77	49.425	Cavia_aperea
ENSAMXG00000012546	surf6	99	43.501	ENSCPOG00000030454	SURF6	99	43.236	Cavia_porcellus
ENSAMXG00000012546	surf6	50	53.191	ENSCCAG00000025688	SURF6	82	52.577	Cebus_capucinus
ENSAMXG00000012546	surf6	99	40.519	ENSCATG00000042004	SURF6	99	42.708	Cercocebus_atys
ENSAMXG00000012546	surf6	99	42.105	ENSCLAG00000004429	SURF6	88	42.105	Chinchilla_lanigera
ENSAMXG00000012546	surf6	99	39.844	ENSCSAG00000018888	-	99	43.702	Chlorocebus_sabaeus
ENSAMXG00000012546	surf6	99	40.470	ENSCSAG00000015203	-	99	41.860	Chlorocebus_sabaeus
ENSAMXG00000012546	surf6	99	43.979	ENSCPBG00000021169	SURF6	99	45.431	Chrysemys_picta_bellii
ENSAMXG00000012546	surf6	99	42.742	ENSCGRG00000017035	Surf6	99	41.489	Cricetulus_griseus_crigri
ENSAMXG00000012546	surf6	99	52.022	ENSCSEG00000015172	surf6	99	50.943	Cynoglossus_semilaevis
ENSAMXG00000012546	surf6	75	59.498	ENSCVAG00000015730	surf6	84	58.929	Cyprinodon_variegatus
ENSAMXG00000012546	surf6	99	64.191	ENSDARG00000035427	surf6	99	63.130	Danio_rerio
ENSAMXG00000012546	surf6	99	38.660	ENSDNOG00000049519	SURF6	96	39.433	Dasypus_novemcinctus
ENSAMXG00000012546	surf6	99	42.204	ENSDORG00000010761	Surf6	99	42.559	Dipodomys_ordii
ENSAMXG00000012546	surf6	71	42.045	ENSETEG00000004239	SURF6	77	45.455	Echinops_telfairi
ENSAMXG00000012546	surf6	99	39.523	ENSECAG00000021229	SURF6	99	41.645	Equus_caballus
ENSAMXG00000012546	surf6	69	50.000	ENSEEUG00000011071	-	85	45.349	Erinaceus_europaeus
ENSAMXG00000012546	surf6	99	39.842	ENSFCAG00000040914	SURF6	99	39.791	Felis_catus
ENSAMXG00000012546	surf6	99	41.534	ENSFALG00000001495	SURF6	99	44.386	Ficedula_albicollis
ENSAMXG00000012546	surf6	70	47.893	ENSFDAG00000007052	SURF6	79	47.893	Fukomys_damarensis
ENSAMXG00000012546	surf6	99	54.570	ENSFHEG00000002290	surf6	99	54.595	Fundulus_heteroclitus
ENSAMXG00000012546	surf6	99	46.457	ENSGALG00000038413	SURF6	99	46.253	Gallus_gallus
ENSAMXG00000012546	surf6	99	55.108	ENSGAFG00000013618	surf6	99	54.255	Gambusia_affinis
ENSAMXG00000012546	surf6	99	43.117	ENSGAGG00000010286	SURF6	99	43.990	Gopherus_agassizii
ENSAMXG00000012546	surf6	99	41.623	ENSGGOG00000014426	SURF6	99	42.820	Gorilla_gorilla
ENSAMXG00000012546	surf6	99	53.476	ENSHBUG00000008764	surf6	99	53.743	Haplochromis_burtoni
ENSAMXG00000012546	surf6	99	41.795	ENSHGLG00000013027	SURF6	99	44.149	Heterocephalus_glaber_female
ENSAMXG00000012546	surf6	99	40.665	ENSHGLG00100015654	SURF6	65	50.187	Heterocephalus_glaber_male
ENSAMXG00000012546	surf6	99	48.819	ENSHCOG00000001639	surf6	99	47.884	Hippocampus_comes
ENSAMXG00000012546	surf6	99	67.292	ENSIPUG00000008066	surf6	99	67.292	Ictalurus_punctatus
ENSAMXG00000012546	surf6	99	38.918	ENSSTOG00000020164	SURF6	99	42.636	Ictidomys_tridecemlineatus
ENSAMXG00000012546	surf6	99	42.895	ENSJJAG00000016287	Surf6	99	42.368	Jaculus_jaculus
ENSAMXG00000012546	surf6	98	53.117	ENSKMAG00000009936	surf6	99	54.891	Kryptolebias_marmoratus
ENSAMXG00000012546	surf6	98	53.639	ENSLBEG00000024311	surf6	99	54.032	Labrus_bergylta
ENSAMXG00000012546	surf6	98	46.257	ENSLACG00000013322	SURF6	99	47.696	Latimeria_chalumnae
ENSAMXG00000012546	surf6	99	50.802	ENSLOCG00000004072	surf6	99	49.869	Lepisosteus_oculatus
ENSAMXG00000012546	surf6	99	41.270	ENSLAFG00000026419	SURF6	99	40.053	Loxodonta_africana
ENSAMXG00000012546	surf6	71	45.283	ENSMMUG00000022339	-	76	48.689	Macaca_mulatta
ENSAMXG00000012546	surf6	99	39.583	ENSMNEG00000033787	SURF6	99	42.708	Macaca_nemestrina
ENSAMXG00000012546	surf6	99	40.779	ENSMLEG00000028750	SURF6	99	43.081	Mandrillus_leucophaeus
ENSAMXG00000012546	surf6	99	55.914	ENSMAMG00000018269	surf6	99	56.383	Mastacembelus_armatus
ENSAMXG00000012546	surf6	99	53.476	ENSMZEG00005003188	surf6	99	53.743	Maylandia_zebra
ENSAMXG00000012546	surf6	99	46.475	ENSMGAG00000006371	SURF6	99	46.753	Meleagris_gallopavo
ENSAMXG00000012546	surf6	99	44.800	ENSMAUG00000020676	Surf6	99	45.479	Mesocricetus_auratus
ENSAMXG00000012546	surf6	99	40.365	ENSMICG00000046077	SURF6	99	41.927	Microcebus_murinus
ENSAMXG00000012546	surf6	99	43.316	ENSMOCG00000011956	Surf6	99	44.118	Microtus_ochrogaster
ENSAMXG00000012546	surf6	99	44.032	ENSMODG00000012744	SURF6	99	45.932	Monodelphis_domestica
ENSAMXG00000012546	surf6	99	56.836	ENSMALG00000012310	surf6	99	57.105	Monopterus_albus
ENSAMXG00000012546	surf6	99	43.280	MGP_CAROLIEiJ_G0023325	Surf6	99	44.297	Mus_caroli
ENSAMXG00000012546	surf6	99	42.298	ENSMUSG00000036160	Surf6	99	44.444	Mus_musculus
ENSAMXG00000012546	surf6	99	44.533	MGP_PahariEiJ_G0024782	Surf6	99	44.533	Mus_pahari
ENSAMXG00000012546	surf6	99	43.817	MGP_SPRETEiJ_G0024242	Surf6	99	44.297	Mus_spretus
ENSAMXG00000012546	surf6	99	39.221	ENSMPUG00000012416	SURF6	94	40.415	Mustela_putorius_furo
ENSAMXG00000012546	surf6	99	40.318	ENSNGAG00000015358	Surf6	99	40.584	Nannospalax_galili
ENSAMXG00000012546	surf6	99	53.476	ENSNBRG00000007805	surf6	99	53.743	Neolamprologus_brichardi
ENSAMXG00000012546	surf6	99	40.052	ENSNLEG00000013079	SURF6	99	42.037	Nomascus_leucogenys
ENSAMXG00000012546	surf6	70	45.769	ENSMEUG00000006545	-	69	41.538	Notamacropus_eugenii
ENSAMXG00000012546	surf6	99	42.204	ENSODEG00000015789	SURF6	99	41.129	Octodon_degus
ENSAMXG00000012546	surf6	98	53.243	ENSONIG00000011294	surf6	98	53.763	Oreochromis_niloticus
ENSAMXG00000012546	surf6	99	33.770	ENSOANG00000011709	-	99	33.684	Ornithorhynchus_anatinus
ENSAMXG00000012546	surf6	100	52.895	ENSORLG00000003980	surf6	87	52.632	Oryzias_latipes
ENSAMXG00000012546	surf6	100	52.632	ENSORLG00020009339	surf6	87	52.632	Oryzias_latipes_hni
ENSAMXG00000012546	surf6	100	52.632	ENSORLG00015016272	surf6	87	52.632	Oryzias_latipes_hsok
ENSAMXG00000012546	surf6	99	52.507	ENSOMEG00000011772	surf6	87	52.368	Oryzias_melastigma
ENSAMXG00000012546	surf6	99	38.503	ENSOGAG00000027199	SURF6	99	40.160	Otolemur_garnettii
ENSAMXG00000012546	surf6	71	37.594	ENSOARG00000003711	SURF6	89	36.184	Ovis_aries
ENSAMXG00000012546	surf6	99	40.576	ENSPPAG00000032305	SURF6	99	42.820	Pan_paniscus
ENSAMXG00000012546	surf6	99	39.633	ENSPPRG00000003090	SURF6	99	40.992	Panthera_pardus
ENSAMXG00000012546	surf6	99	40.576	ENSPTRG00000021514	SURF6	99	42.820	Pan_troglodytes
ENSAMXG00000012546	surf6	99	40.260	ENSPANG00000026036	SURF6	99	42.559	Papio_anubis
ENSAMXG00000012546	surf6	98	52.688	ENSPKIG00000025080	surf6	89	52.688	Paramormyrops_kingsleyae
ENSAMXG00000012546	surf6	99	43.717	ENSPSIG00000011771	SURF6	99	46.597	Pelodiscus_sinensis
ENSAMXG00000012546	surf6	73	61.538	ENSPMGG00000004798	surf6	95	57.705	Periophthalmus_magnuspinnatus
ENSAMXG00000012546	surf6	99	44.118	ENSPEMG00000012589	Surf6	99	43.733	Peromyscus_maniculatus_bairdii
ENSAMXG00000012546	surf6	99	44.709	ENSPCIG00000017358	SURF6	99	45.503	Phascolarctos_cinereus
ENSAMXG00000012546	surf6	99	53.600	ENSPLAG00000021874	surf6	99	54.424	Poecilia_latipinna
ENSAMXG00000012546	surf6	82	57.742	ENSPMEG00000009994	surf6	86	57.556	Poecilia_mexicana
ENSAMXG00000012546	surf6	99	53.495	ENSPMEG00000009276	surf6	99	54.255	Poecilia_mexicana
ENSAMXG00000012546	surf6	82	57.556	ENSPREG00000021969	surf6	85	62.222	Poecilia_reticulata
ENSAMXG00000012546	surf6	99	40.052	ENSPPYG00000019728	SURF6	99	42.782	Pongo_abelii
ENSAMXG00000012546	surf6	73	38.971	ENSPCAG00000002906	SURF6	71	42.291	Procavia_capensis
ENSAMXG00000012546	surf6	99	40.849	ENSPCOG00000015707	SURF6	99	40.897	Propithecus_coquereli
ENSAMXG00000012546	surf6	69	42.248	ENSPVAG00000017042	SURF6	99	37.533	Pteropus_vampyrus
ENSAMXG00000012546	surf6	99	53.476	ENSPNYG00000003445	surf6	99	53.743	Pundamilia_nyererei
ENSAMXG00000012546	surf6	100	72.074	ENSPNAG00000006939	surf6	100	71.543	Pygocentrus_nattereri
ENSAMXG00000012546	surf6	99	43.467	ENSRNOG00000005031	Surf6	99	43.850	Rattus_norvegicus
ENSAMXG00000012546	surf6	99	41.053	ENSRBIG00000028268	SURF6	99	43.536	Rhinopithecus_bieti
ENSAMXG00000012546	surf6	99	41.053	ENSRROG00000012667	SURF6	99	43.536	Rhinopithecus_roxellana
ENSAMXG00000012546	surf6	99	36.939	ENSSBOG00000024264	-	99	37.203	Saimiri_boliviensis_boliviensis
ENSAMXG00000012546	surf6	99	42.408	ENSSHAG00000003742	SURF6	99	41.885	Sarcophilus_harrisii
ENSAMXG00000012546	surf6	100	55.469	ENSSFOG00015016640	surf6	97	55.469	Scleropages_formosus
ENSAMXG00000012546	surf6	99	55.467	ENSSMAG00000009846	surf6	99	55.795	Scophthalmus_maximus
ENSAMXG00000012546	surf6	99	56.085	ENSSDUG00000007947	surf6	99	56.349	Seriola_dumerili
ENSAMXG00000012546	surf6	99	55.820	ENSSLDG00000015027	surf6	99	56.085	Seriola_lalandi_dorsalis
ENSAMXG00000012546	surf6	99	41.039	ENSSPUG00000015954	SURF6	99	42.416	Sphenodon_punctatus
ENSAMXG00000012546	surf6	99	54.255	ENSSPAG00000005916	surf6	99	55.053	Stegastes_partitus
ENSAMXG00000012546	surf6	99	41.579	ENSTGUG00000005438	-	99	43.570	Taeniopygia_guttata
ENSAMXG00000012546	surf6	69	47.287	ENSTGUG00000005445	-	99	53.101	Taeniopygia_guttata
ENSAMXG00000012546	surf6	74	61.957	ENSTRUG00000023872	surf6	74	61.957	Takifugu_rubripes
ENSAMXG00000012546	surf6	70	63.359	ENSTNIG00000007503	surf6	73	64.504	Tetraodon_nigroviridis
ENSAMXG00000012546	surf6	99	37.731	ENSVVUG00000027289	SURF6	99	39.267	Vulpes_vulpes
ENSAMXG00000012546	surf6	99	48.248	ENSXETG00000005018	surf6	99	48.128	Xenopus_tropicalis
ENSAMXG00000012546	surf6	99	55.376	ENSXCOG00000001322	surf6	99	54.545	Xiphophorus_couchianus
ENSAMXG00000012546	surf6	99	55.496	ENSXMAG00000024608	surf6	99	54.667	Xiphophorus_maculatus