EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000012852 (Gene tree)
Gene ID: 103040432
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 26288 bases
Position: chr25:19323380-19349667
Accession: 103040432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000013240	NUC173	PF08161.12	2.1e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000013240	-	9046	XM_022684799	ENSAMXP00000013240	1282 (aa)	XP_022540520	W5L078

Gene Model

Click here to download ENSAMXG00000012852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000012852	rrp12	98	69.143	ENSG00000052749	RRP12	100	77.966	Homo_sapiens
ENSAMXG00000012852	rrp12	99	74.825	ENSAPOG00000013355	rrp12	99	73.866	Acanthochromis_polyacanthus
ENSAMXG00000012852	rrp12	99	61.231	ENSAMEG00000000134	RRP12	99	61.308	Ailuropoda_melanoleuca
ENSAMXG00000012852	rrp12	99	76.466	ENSACIG00000022673	rrp12	99	76.301	Amphilophus_citrinellus
ENSAMXG00000012852	rrp12	99	77.361	ENSAOCG00000016149	rrp12	99	77.269	Amphiprion_ocellaris
ENSAMXG00000012852	rrp12	99	76.750	ENSAPEG00000016023	rrp12	99	76.566	Amphiprion_percula
ENSAMXG00000012852	rrp12	99	76.150	ENSATEG00000022627	rrp12	99	75.678	Anabas_testudineus
ENSAMXG00000012852	rrp12	96	57.844	ENSAPLG00000014387	RRP12	99	57.924	Anas_platyrhynchos
ENSAMXG00000012852	rrp12	99	59.042	ENSACAG00000002175	RRP12	99	59.042	Anolis_carolinensis
ENSAMXG00000012852	rrp12	98	68.571	ENSANAG00000037485	RRP12	99	61.111	Aotus_nancymaae
ENSAMXG00000012852	rrp12	99	75.450	ENSACLG00000007354	rrp12	99	75.602	Astatotilapia_calliptera
ENSAMXG00000012852	rrp12	98	66.477	ENSBTAG00000002191	RRP12	99	68.750	Bos_taurus
ENSAMXG00000012852	rrp12	85	58.508	ENSCJAG00000016549	-	99	58.053	Callithrix_jacchus
ENSAMXG00000012852	rrp12	99	61.201	ENSCAFG00000009043	RRP12	99	60.723	Canis_familiaris
ENSAMXG00000012852	rrp12	99	61.201	ENSCAFG00020005991	RRP12	99	60.723	Canis_lupus_dingo
ENSAMXG00000012852	rrp12	99	58.724	ENSCHIG00000011876	RRP12	99	58.270	Capra_hircus
ENSAMXG00000012852	rrp12	53	52.155	ENSTSYG00000030210	-	99	52.586	Carlito_syrichta
ENSAMXG00000012852	rrp12	96	54.888	ENSCAPG00000008991	RRP12	98	55.109	Cavia_aperea
ENSAMXG00000012852	rrp12	99	61.021	ENSCPOG00000004215	RRP12	99	60.944	Cavia_porcellus
ENSAMXG00000012852	rrp12	79	65.237	ENSCCAG00000024088	RRP12	99	67.176	Cebus_capucinus
ENSAMXG00000012852	rrp12	70	55.604	ENSCCAG00000033123	-	82	55.154	Cebus_capucinus
ENSAMXG00000012852	rrp12	99	57.121	ENSCATG00000045310	RRP12	99	57.033	Cercocebus_atys
ENSAMXG00000012852	rrp12	99	60.678	ENSCLAG00000003753	RRP12	99	60.662	Chinchilla_lanigera
ENSAMXG00000012852	rrp12	89	58.834	ENSCSAG00000005877	RRP12	99	58.762	Chlorocebus_sabaeus
ENSAMXG00000012852	rrp12	59	69.717	ENSCHOG00000003095	-	56	70.216	Choloepus_hoffmanni
ENSAMXG00000012852	rrp12	94	61.450	ENSCPBG00000011935	RRP12	97	61.317	Chrysemys_picta_bellii
ENSAMXG00000012852	rrp12	64	39.265	ENSCSAVG00000006059	-	99	38.671	Ciona_savignyi
ENSAMXG00000012852	rrp12	98	68.000	ENSCANG00000031653	RRP12	99	68.000	Colobus_angolensis_palliatus
ENSAMXG00000012852	rrp12	91	60.803	ENSCGRG00001004338	Rrp12	99	60.632	Cricetulus_griseus_chok1gshd
ENSAMXG00000012852	rrp12	99	60.742	ENSCGRG00000011965	Rrp12	99	60.587	Cricetulus_griseus_crigri
ENSAMXG00000012852	rrp12	100	74.961	ENSCSEG00000007799	rrp12	100	74.748	Cynoglossus_semilaevis
ENSAMXG00000012852	rrp12	99	76.016	ENSCVAG00000003418	rrp12	99	75.932	Cyprinodon_variegatus
ENSAMXG00000012852	rrp12	100	78.166	ENSDARG00000022410	rrp12	100	78.477	Danio_rerio
ENSAMXG00000012852	rrp12	99	60.123	ENSDNOG00000005120	RRP12	99	60.077	Dasypus_novemcinctus
ENSAMXG00000012852	rrp12	99	60.786	ENSDORG00000009199	Rrp12	99	60.829	Dipodomys_ordii
ENSAMXG00000012852	rrp12	92	71.429	ENSETEG00000002455	RRP12	92	71.429	Echinops_telfairi
ENSAMXG00000012852	rrp12	87	69.492	ENSEBUG00000006555	rrp12	98	70.213	Eptatretus_burgeri
ENSAMXG00000012852	rrp12	99	61.497	ENSEASG00005008693	RRP12	99	61.064	Equus_asinus_asinus
ENSAMXG00000012852	rrp12	94	60.984	ENSECAG00000010892	RRP12	99	60.623	Equus_caballus
ENSAMXG00000012852	rrp12	69	51.852	ENSEEUG00000005447	-	63	58.529	Erinaceus_europaeus
ENSAMXG00000012852	rrp12	99	74.496	ENSELUG00000010510	rrp12	97	80.851	Esox_lucius
ENSAMXG00000012852	rrp12	98	68.966	ENSFCAG00000028639	RRP12	99	68.966	Felis_catus
ENSAMXG00000012852	rrp12	94	60.463	ENSFALG00000008458	RRP12	99	60.481	Ficedula_albicollis
ENSAMXG00000012852	rrp12	99	60.618	ENSFDAG00000019108	RRP12	95	60.725	Fukomys_damarensis
ENSAMXG00000012852	rrp12	99	70.047	ENSFHEG00000004148	rrp12	99	69.147	Fundulus_heteroclitus
ENSAMXG00000012852	rrp12	99	65.916	ENSGMOG00000004188	rrp12	99	65.972	Gadus_morhua
ENSAMXG00000012852	rrp12	99	60.775	ENSGALG00000041331	RRP12	95	62.016	Gallus_gallus
ENSAMXG00000012852	rrp12	99	75.547	ENSGAFG00000009038	rrp12	99	75.466	Gambusia_affinis
ENSAMXG00000012852	rrp12	99	74.824	ENSGACG00000007175	rrp12	99	74.514	Gasterosteus_aculeatus
ENSAMXG00000012852	rrp12	67	66.551	ENSGAGG00000019169	RRP12	96	66.551	Gopherus_agassizii
ENSAMXG00000012852	rrp12	98	69.143	ENSGGOG00000014850	RRP12	99	69.143	Gorilla_gorilla
ENSAMXG00000012852	rrp12	99	75.606	ENSHBUG00000023527	rrp12	99	75.758	Haplochromis_burtoni
ENSAMXG00000012852	rrp12	99	60.819	ENSHGLG00000016772	RRP12	99	60.957	Heterocephalus_glaber_female
ENSAMXG00000012852	rrp12	99	60.819	ENSHGLG00100015110	RRP12	99	60.957	Heterocephalus_glaber_male
ENSAMXG00000012852	rrp12	100	72.127	ENSHCOG00000019519	rrp12	100	72.227	Hippocampus_comes
ENSAMXG00000012852	rrp12	100	83.152	ENSIPUG00000000311	RRP12	100	83.152	Ictalurus_punctatus
ENSAMXG00000012852	rrp12	99	62.037	ENSSTOG00000006515	RRP12	99	62.173	Ictidomys_tridecemlineatus
ENSAMXG00000012852	rrp12	96	60.208	ENSJJAG00000000110	Rrp12	99	60.208	Jaculus_jaculus
ENSAMXG00000012852	rrp12	99	76.484	ENSKMAG00000020621	rrp12	99	76.398	Kryptolebias_marmoratus
ENSAMXG00000012852	rrp12	100	72.304	ENSLBEG00000015335	rrp12	100	72.390	Labrus_bergylta
ENSAMXG00000012852	rrp12	72	64.419	ENSLACG00000016633	RRP12	80	64.419	Latimeria_chalumnae
ENSAMXG00000012852	rrp12	100	68.944	ENSLOCG00000003846	rrp12	100	68.944	Lepisosteus_oculatus
ENSAMXG00000012852	rrp12	99	61.509	ENSLAFG00000015965	RRP12	99	61.261	Loxodonta_africana
ENSAMXG00000012852	rrp12	98	67.429	ENSMFAG00000041558	RRP12	99	67.429	Macaca_fascicularis
ENSAMXG00000012852	rrp12	98	67.429	ENSMMUG00000019634	RRP12	99	67.429	Macaca_mulatta
ENSAMXG00000012852	rrp12	98	67.429	ENSMNEG00000036759	RRP12	99	67.429	Macaca_nemestrina
ENSAMXG00000012852	rrp12	99	57.211	ENSMLEG00000041317	RRP12	99	57.020	Mandrillus_leucophaeus
ENSAMXG00000012852	rrp12	99	74.688	ENSMAMG00000002964	rrp12	99	76.598	Mastacembelus_armatus
ENSAMXG00000012852	rrp12	99	75.606	ENSMZEG00005003241	rrp12	99	75.758	Maylandia_zebra
ENSAMXG00000012852	rrp12	99	59.891	ENSMGAG00000009829	RRP12	99	59.891	Meleagris_gallopavo
ENSAMXG00000012852	rrp12	99	59.505	ENSMAUG00000020743	Rrp12	99	58.964	Mesocricetus_auratus
ENSAMXG00000012852	rrp12	98	70.286	ENSMICG00000007624	RRP12	99	70.286	Microcebus_murinus
ENSAMXG00000012852	rrp12	99	61.699	ENSMOCG00000006753	Rrp12	99	61.372	Microtus_ochrogaster
ENSAMXG00000012852	rrp12	99	73.933	ENSMMOG00000010708	rrp12	99	74.011	Mola_mola
ENSAMXG00000012852	rrp12	99	61.455	ENSMODG00000004315	RRP12	99	61.068	Monodelphis_domestica
ENSAMXG00000012852	rrp12	99	70.561	ENSMALG00000016560	rrp12	99	74.641	Monopterus_albus
ENSAMXG00000012852	rrp12	99	61.056	MGP_CAROLIEiJ_G0022957	Rrp12	99	60.383	Mus_caroli
ENSAMXG00000012852	rrp12	99	61.467	ENSMUSG00000035049	Rrp12	99	60.756	Mus_musculus
ENSAMXG00000012852	rrp12	99	61.544	MGP_PahariEiJ_G0014447	Rrp12	99	60.833	Mus_pahari
ENSAMXG00000012852	rrp12	99	61.622	MGP_SPRETEiJ_G0023878	Rrp12	99	60.910	Mus_spretus
ENSAMXG00000012852	rrp12	99	61.107	ENSMPUG00000017046	RRP12	99	60.893	Mustela_putorius_furo
ENSAMXG00000012852	rrp12	99	60.983	ENSMLUG00000017160	RRP12	99	60.936	Myotis_lucifugus
ENSAMXG00000012852	rrp12	99	61.699	ENSNGAG00000024144	Rrp12	99	61.681	Nannospalax_galili
ENSAMXG00000012852	rrp12	99	74.277	ENSNBRG00000009987	rrp12	99	74.437	Neolamprologus_brichardi
ENSAMXG00000012852	rrp12	98	69.143	ENSNLEG00000013762	RRP12	99	69.143	Nomascus_leucogenys
ENSAMXG00000012852	rrp12	99	55.322	ENSMEUG00000003185	RRP12	99	55.322	Notamacropus_eugenii
ENSAMXG00000012852	rrp12	94	66.389	ENSOPRG00000005001	RRP12	94	66.389	Ochotona_princeps
ENSAMXG00000012852	rrp12	99	60.404	ENSODEG00000016439	RRP12	99	60.310	Octodon_degus
ENSAMXG00000012852	rrp12	99	75.762	ENSONIG00000009528	rrp12	99	75.913	Oreochromis_niloticus
ENSAMXG00000012852	rrp12	99	56.802	ENSOANG00000006560	RRP12	99	56.649	Ornithorhynchus_anatinus
ENSAMXG00000012852	rrp12	99	60.944	ENSOCUG00000005662	RRP12	99	61.098	Oryctolagus_cuniculus
ENSAMXG00000012852	rrp12	99	74.531	ENSORLG00000008688	rrp12	99	74.576	Oryzias_latipes
ENSAMXG00000012852	rrp12	98	74.702	ENSORLG00020002355	rrp12	99	74.622	Oryzias_latipes_hni
ENSAMXG00000012852	rrp12	99	74.688	ENSORLG00015006709	rrp12	99	74.612	Oryzias_latipes_hsok
ENSAMXG00000012852	rrp12	98	75.259	ENSOMEG00000002609	rrp12	99	75.179	Oryzias_melastigma
ENSAMXG00000012852	rrp12	99	60.739	ENSOGAG00000001626	RRP12	99	60.799	Otolemur_garnettii
ENSAMXG00000012852	rrp12	99	59.892	ENSOARG00000009681	RRP12	99	59.416	Ovis_aries
ENSAMXG00000012852	rrp12	98	69.143	ENSPPAG00000043885	RRP12	99	69.143	Pan_paniscus
ENSAMXG00000012852	rrp12	98	69.540	ENSPPRG00000002029	RRP12	99	69.540	Panthera_pardus
ENSAMXG00000012852	rrp12	98	68.966	ENSPTIG00000004428	RRP12	99	68.966	Panthera_tigris_altaica
ENSAMXG00000012852	rrp12	98	69.143	ENSPTRG00000002806	RRP12	99	69.143	Pan_troglodytes
ENSAMXG00000012852	rrp12	98	67.241	ENSPANG00000021360	RRP12	99	68.000	Papio_anubis
ENSAMXG00000012852	rrp12	99	73.782	ENSPKIG00000016516	rrp12	99	73.607	Paramormyrops_kingsleyae
ENSAMXG00000012852	rrp12	99	73.750	ENSPMGG00000020217	rrp12	99	73.370	Periophthalmus_magnuspinnatus
ENSAMXG00000012852	rrp12	99	61.835	ENSPEMG00000008437	Rrp12	99	61.527	Peromyscus_maniculatus_bairdii
ENSAMXG00000012852	rrp12	99	44.778	ENSPMAG00000007493	rrp12	99	45.094	Petromyzon_marinus
ENSAMXG00000012852	rrp12	96	71.947	ENSPCIG00000002157	RRP12	100	60.960	Phascolarctos_cinereus
ENSAMXG00000012852	rrp12	99	75.781	ENSPFOG00000014975	rrp12	99	75.699	Poecilia_formosa
ENSAMXG00000012852	rrp12	99	75.781	ENSPLAG00000009840	rrp12	99	75.699	Poecilia_latipinna
ENSAMXG00000012852	rrp12	99	75.859	ENSPMEG00000021871	rrp12	99	75.776	Poecilia_mexicana
ENSAMXG00000012852	rrp12	99	73.385	ENSPREG00000020950	rrp12	99	72.657	Poecilia_reticulata
ENSAMXG00000012852	rrp12	99	60.247	ENSPPYG00000002528	RRP12	99	59.923	Pongo_abelii
ENSAMXG00000012852	rrp12	94	78.531	ENSPCAG00000008967	RRP12	94	78.531	Procavia_capensis
ENSAMXG00000012852	rrp12	98	69.540	ENSPCOG00000014009	RRP12	99	69.540	Propithecus_coquereli
ENSAMXG00000012852	rrp12	99	58.507	ENSPVAG00000003370	RRP12	99	58.276	Pteropus_vampyrus
ENSAMXG00000012852	rrp12	99	75.919	ENSPNYG00000009451	rrp12	99	76.068	Pundamilia_nyererei
ENSAMXG00000012852	rrp12	100	86.148	ENSPNAG00000007658	rrp12	100	86.148	Pygocentrus_nattereri
ENSAMXG00000012852	rrp12	99	61.515	ENSRNOG00000048495	Rrp12	99	61.188	Rattus_norvegicus
ENSAMXG00000012852	rrp12	98	68.000	ENSRBIG00000021296	RRP12	99	68.000	Rhinopithecus_bieti
ENSAMXG00000012852	rrp12	98	68.000	ENSRROG00000032482	RRP12	99	68.000	Rhinopithecus_roxellana
ENSAMXG00000012852	rrp12	98	68.391	ENSSBOG00000030992	RRP12	100	68.391	Saimiri_boliviensis_boliviensis
ENSAMXG00000012852	rrp12	99	61.550	ENSSHAG00000018275	RRP12	99	61.335	Sarcophilus_harrisii
ENSAMXG00000012852	rrp12	99	75.583	ENSSFOG00015016400	rrp12	99	75.505	Scleropages_formosus
ENSAMXG00000012852	rrp12	99	75.997	ENSSMAG00000004047	rrp12	99	76.242	Scophthalmus_maximus
ENSAMXG00000012852	rrp12	99	76.269	ENSSDUG00000022871	rrp12	99	76.183	Seriola_dumerili
ENSAMXG00000012852	rrp12	99	76.190	ENSSLDG00000003038	rrp12	99	76.106	Seriola_lalandi_dorsalis
ENSAMXG00000012852	rrp12	99	59.365	ENSSPUG00000012221	RRP12	99	59.288	Sphenodon_punctatus
ENSAMXG00000012852	rrp12	99	77.361	ENSSPAG00000002261	rrp12	99	77.502	Stegastes_partitus
ENSAMXG00000012852	rrp12	99	61.343	ENSSSCG00000010514	RRP12	99	61.171	Sus_scrofa
ENSAMXG00000012852	rrp12	88	57.719	ENSTGUG00000009711	RRP12	99	57.105	Taeniopygia_guttata
ENSAMXG00000012852	rrp12	99	70.171	ENSTRUG00000012017	rrp12	99	69.650	Takifugu_rubripes
ENSAMXG00000012852	rrp12	100	74.514	ENSTNIG00000016522	rrp12	100	74.437	Tetraodon_nigroviridis
ENSAMXG00000012852	rrp12	77	77.451	ENSTBEG00000004907	RRP12	80	77.451	Tupaia_belangeri
ENSAMXG00000012852	rrp12	99	58.687	ENSTTRG00000009878	RRP12	99	58.301	Tursiops_truncatus
ENSAMXG00000012852	rrp12	99	61.231	ENSUAMG00000009092	RRP12	99	61.367	Ursus_americanus
ENSAMXG00000012852	rrp12	99	59.428	ENSUMAG00000021621	RRP12	99	59.752	Ursus_maritimus
ENSAMXG00000012852	rrp12	99	61.378	ENSVVUG00000023168	RRP12	99	60.991	Vulpes_vulpes
ENSAMXG00000012852	rrp12	99	63.953	ENSXETG00000003430	rrp12	99	63.876	Xenopus_tropicalis
ENSAMXG00000012852	rrp12	90	75.259	ENSXCOG00000012082	rrp12	96	75.152	Xiphophorus_couchianus
ENSAMXG00000012852	rrp12	99	75.703	ENSXMAG00000013498	rrp12	99	75.621	Xiphophorus_maculatus