EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000012873 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
8649 bases
Position
chrAPWO02000129.1:90847-99495
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4719
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4729
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4739
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4749
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4759
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4769
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4779
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4789
ENSAMXP00000045491zf-C2H2PF00096.268.7e-4799
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4518
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4528
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4538
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4548
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4558
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4568
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4578
ENSAMXP00000013234zf-C2H2PF00096.268.6e-4588
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4318
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4328
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4338
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4348
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4358
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4368
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4378
ENSAMXP00000046915zf-C2H2PF00096.262.1e-4388
ENSAMXP00000045491zf-metPF12874.72.2e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000013234-1110-ENSAMXP00000013234369 (aa)-W5L072
ENSAMXT00000032341-909-ENSAMXP00000045491302 (aa)--
ENSAMXT00000054576-870-ENSAMXP00000046915289 (aa)--
Gene Model
Click here to download ENSAMXG00000012873's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000012873's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000012873-9938.750ENSAMXG00000025761-8738.132
ENSAMXG00000012873-9659.113ENSAMXG00000034847-9058.084
ENSAMXG00000012873-9161.847ENSAMXG00000018161-9760.377
ENSAMXG00000012873-9460.156ENSAMXG00000017609-8360.156
ENSAMXG00000012873-9363.636ENSAMXG00000033500-9563.636
ENSAMXG00000012873-9760.369ENSAMXG00000035920-9363.415
ENSAMXG00000012873-9758.271ENSAMXG00000030742-9859.766
ENSAMXG00000012873-9461.240ENSAMXG00000025452-9661.240
ENSAMXG00000012873-9243.103ENSAMXG00000017199-5243.182
ENSAMXG00000012873-9559.480ENSAMXG00000011804-9559.480
ENSAMXG00000012873-9854.406ENSAMXG00000030659-8554.406
ENSAMXG00000012873-9543.017ENSAMXG00000042191zbtb47a7540.876
ENSAMXG00000012873-9261.310ENSAMXG00000029878-9960.494
ENSAMXG00000012873-9359.766ENSAMXG00000041865-9959.766
ENSAMXG00000012873-9655.952ENSAMXG00000012604-9854.450
ENSAMXG00000012873-9758.113ENSAMXG00000038453-8957.143
ENSAMXG00000012873-9360.656ENSAMXG00000039162-9862.109
ENSAMXG00000012873-9741.961ENSAMXG00000033299-7241.961
ENSAMXG00000012873-9158.282ENSAMXG00000030963-8858.065
ENSAMXG00000012873-9362.500ENSAMXG00000025965-9661.172
ENSAMXG00000012873-9741.667ENSAMXG00000033001-6735.507
ENSAMXG00000012873-9039.394ENSAMXG00000029059-6539.394
ENSAMXG00000012873-9660.547ENSAMXG00000041128-9260.714
ENSAMXG00000012873-9655.556ENSAMXG00000029161-8159.740
ENSAMXG00000012873-9362.500ENSAMXG00000031501-9062.500
ENSAMXG00000012873-9657.600ENSAMXG00000026142-9157.600
ENSAMXG00000012873-9653.571ENSAMXG00000039881-5050.698
ENSAMXG00000012873-9761.977ENSAMXG00000008613-9761.624
ENSAMXG00000012873-9857.812ENSAMXG00000039004-9757.812
ENSAMXG00000012873-9659.127ENSAMXG00000037760-9859.127
ENSAMXG00000012873-9861.570ENSAMXG00000043251-9561.570
ENSAMXG00000012873-9355.814ENSAMXG00000042746-9155.440
ENSAMXG00000012873-9261.364ENSAMXG00000025455-9862.185
ENSAMXG00000012873-9446.429ENSAMXG00000007973-9747.205
ENSAMXG00000012873-9656.710ENSAMXG00000038905-9854.386
ENSAMXG00000012873-9037.600ENSAMXG00000038235snai25637.600
ENSAMXG00000012873-9344.865ENSAMXG00000035246-6744.335
ENSAMXG00000012873-9753.160ENSAMXG00000043541-8153.304
ENSAMXG00000012873-9157.613ENSAMXG00000038324-7957.613
ENSAMXG00000012873-9038.278ENSAMXG00000044034-8038.537
ENSAMXG00000012873-9754.643ENSAMXG00000040806-9656.281
ENSAMXG00000012873-9038.636ENSAMXG00000042624SCRT15743.820
ENSAMXG00000012873-9557.613ENSAMXG00000036633-6653.633
ENSAMXG00000012873-9338.835ENSAMXG00000039622zbtb415639.303
ENSAMXG00000012873-9649.804ENSAMXG00000035127-9447.863
ENSAMXG00000012873-9456.538ENSAMXG00000037717-9556.538
ENSAMXG00000012873-9456.757ENSAMXG00000013274-9957.692
ENSAMXG00000012873-9747.685ENSAMXG00000013492-9646.743
ENSAMXG00000012873-9651.394ENSAMXG00000044107-9550.209
ENSAMXG00000012873-9364.286ENSAMXG00000039744-9964.286
ENSAMXG00000012873-9454.800ENSAMXG00000031489-9257.207
ENSAMXG00000012873-9354.839ENSAMXG00000042774-9858.333
ENSAMXG00000012873-9656.228ENSAMXG00000036241-9052.961
ENSAMXG00000012873-9258.868ENSAMXG00000032619-9758.716
ENSAMXG00000012873-9858.397ENSAMXG00000010078-9555.743
ENSAMXG00000012873-9360.753ENSAMXG00000037326-9860.753
ENSAMXG00000012873-9343.478ENSAMXG00000006669GFI16643.478
ENSAMXG00000012873-9159.512ENSAMXG00000039408-9662.573
ENSAMXG00000012873-9460.541ENSAMXG00000039700-9660.541
ENSAMXG00000012873-9165.000ENSAMXG00000032457-9165.000
ENSAMXG00000012873-9940.000ENSAMXG00000007441-6740.000
ENSAMXG00000012873-9457.812ENSAMXG00000009776-9859.677
ENSAMXG00000012873-9360.625ENSAMXG00000035809-9961.250
ENSAMXG00000012873-9453.906ENSAMXG00000009563-9853.906
ENSAMXG00000012873-9663.253ENSAMXG00000038156-6063.580
ENSAMXG00000012873-9533.175ENSAMXG00000008771PRDM155032.035
ENSAMXG00000012873-9461.355ENSAMXG00000036762-9962.109
ENSAMXG00000012873-9558.712ENSAMXG00000040212-8858.712
ENSAMXG00000012873-8961.667ENSAMXG00000039752-9761.667
ENSAMXG00000012873-9661.066ENSAMXG00000030911-6661.702
ENSAMXG00000012873-9659.924ENSAMXG00000038325-9259.924
ENSAMXG00000012873-9162.128ENSAMXG00000007092-9862.128
ENSAMXG00000012873-9855.094ENSAMXG00000031496-9358.203
ENSAMXG00000012873-9955.600ENSAMXG00000037143-9655.600
ENSAMXG00000012873-9244.286ENSAMXG00000044096-8444.286
ENSAMXG00000012873-9258.527ENSAMXG00000036849-8756.977
ENSAMXG00000012873-9361.719ENSAMXG00000041404-9961.719
ENSAMXG00000012873-9754.122ENSAMXG00000032237-9655.682
ENSAMXG00000012873-9559.474ENSAMXG00000039977-9659.474
ENSAMXG00000012873-9336.458ENSAMXG00000039849snai1b6636.538
ENSAMXG00000012873-9756.923ENSAMXG00000042167-9655.639
ENSAMXG00000012873-9459.160ENSAMXG00000042593-9857.028
ENSAMXG00000012873-9555.344ENSAMXG00000043978-9255.426
ENSAMXG00000012873-9354.406ENSAMXG00000031844-9354.202
ENSAMXG00000012873-9452.290ENSAMXG00000038280-9153.082
ENSAMXG00000012873-9854.962ENSAMXG00000038284-9256.696
ENSAMXG00000012873-9153.982ENSAMXG00000042784-9653.982
ENSAMXG00000012873-9856.158ENSAMXG00000036257-9456.158
ENSAMXG00000012873-9861.633ENSAMXG00000037703-8963.187
ENSAMXG00000012873-9657.872ENSAMXG00000037709-9058.874
ENSAMXG00000012873-9757.895ENSAMXG00000010930-8357.895
ENSAMXG00000012873-9261.778ENSAMXG00000041975-8957.955
ENSAMXG00000012873-9859.770ENSAMXG00000034958-9560.547
ENSAMXG00000012873-9758.140ENSAMXG00000044110-9559.684
ENSAMXG00000012873-9449.704ENSAMXG00000033252-9550.000
ENSAMXG00000012873-9156.757ENSAMXG00000039182-8157.031
ENSAMXG00000012873-9758.175ENSAMXG00000040630-9959.766
ENSAMXG00000012873-8840.678ENSAMXG00000002273patz15632.927
ENSAMXG00000012873-9760.000ENSAMXG00000000353-9761.328
ENSAMXG00000012873-9360.550ENSAMXG00000031646-10060.550
ENSAMXG00000012873-9852.140ENSAMXG00000029783-9052.195
ENSAMXG00000012873-9561.290ENSAMXG00000036567-8163.281
ENSAMXG00000012873-9459.091ENSAMXG00000041650-9759.091
ENSAMXG00000012873-9352.941ENSAMXG00000029518-6448.052
ENSAMXG00000012873-9259.245ENSAMXG00000029828-9859.245
ENSAMXG00000012873-9661.856ENSAMXG00000035145-6561.856
ENSAMXG00000012873-9356.977ENSAMXG00000038536-9155.959
ENSAMXG00000012873-9359.174ENSAMXG00000041725-9658.608
ENSAMXG00000012873-9457.988ENSAMXG00000041721-7458.757
ENSAMXG00000012873-9460.484ENSAMXG00000001626-9460.484
ENSAMXG00000012873-8759.633ENSAMXG00000004610-9960.829
ENSAMXG00000012873-9161.044ENSAMXG00000035949-7961.290
ENSAMXG00000012873-9560.099ENSAMXG00000041861-9254.310
ENSAMXG00000012873-9741.634ENSAMXG00000041864prdm59041.797
ENSAMXG00000012873-9658.798ENSAMXG00000031794-9959.184
ENSAMXG00000012873-9038.636ENSAMXG00000034158scrt25541.573
ENSAMXG00000012873-9361.066ENSAMXG00000038636-9859.921
ENSAMXG00000012873-9656.463ENSAMXG00000029109-9256.463
ENSAMXG00000012873-9938.462ENSAMXG00000024907znf319b8538.462
ENSAMXG00000012873-9750.251ENSAMXG00000034857-6854.023
ENSAMXG00000012873-9038.333ENSAMXG00000001155si:dkey-89b17.46338.655
ENSAMXG00000012873-9455.745ENSAMXG00000003002-9657.563
ENSAMXG00000012873-9653.769ENSAMXG00000034344-7857.664
ENSAMXG00000012873-9462.948ENSAMXG00000024978-9961.719
ENSAMXG00000012873-9357.613ENSAMXG00000039016-8357.197
ENSAMXG00000012873-9854.373ENSAMXG00000042174-9354.373
ENSAMXG00000012873-9657.937ENSAMXG00000042275-9859.766
ENSAMXG00000012873-9550.382ENSAMXG00000012589-9650.189
ENSAMXG00000012873-9660.618ENSAMXG00000034402-9862.257
ENSAMXG00000012873-9460.000ENSAMXG00000037981-7559.211
ENSAMXG00000012873-9655.365ENSAMXG00000043291-6956.332
ENSAMXG00000012873-9046.667ENSAMXG00000015228-6146.667
ENSAMXG00000012873-9362.109ENSAMXG00000043423-8262.109
ENSAMXG00000012873-9661.979ENSAMXG00000044028-9861.321
ENSAMXG00000012873-9857.513ENSAMXG00000035875-9957.513
ENSAMXG00000012873-9346.032ENSAMXG00000034934-9046.429
ENSAMXG00000012873-9845.652ENSAMXG00000014745-9044.390
ENSAMXG00000012873-9259.231ENSAMXG00000035437-9859.231
ENSAMXG00000012873-9260.755ENSAMXG00000037885-9861.049
ENSAMXG00000012873-9838.889ENSAMXG00000034873-9738.889
ENSAMXG00000012873-9540.690ENSAMXG00000032845-5639.506
ENSAMXG00000012873-9657.241ENSAMXG00000019489-9557.241
ENSAMXG00000012873-9357.422ENSAMXG00000042633-9856.250
ENSAMXG00000012873-9756.250ENSAMXG00000040677-8757.083
ENSAMXG00000012873-9257.252ENSAMXG00000026143-9655.642
ENSAMXG00000012873-9556.538ENSAMXG00000037923-9957.627
ENSAMXG00000012873-9359.064ENSAMXG00000035683-9559.064
ENSAMXG00000012873-9654.167ENSAMXG00000034333-9454.167
ENSAMXG00000012873-9656.641ENSAMXG00000036915-9855.957
ENSAMXG00000012873-9441.880ENSAMXG00000035525znf6467438.843
ENSAMXG00000012873-9655.172ENSAMXG00000026144-9953.710
ENSAMXG00000012873-9651.818ENSAMXG00000043302-7253.023
ENSAMXG00000012873-9557.343ENSAMXG00000036233-9357.343
ENSAMXG00000012873-9658.369ENSAMXG00000039432-9557.609
ENSAMXG00000012873-9653.782ENSAMXG00000035286si:ch1073-224n8.18744.048
ENSAMXG00000012873-9956.897ENSAMXG00000039770-9056.897
ENSAMXG00000012873-9756.107ENSAMXG00000017959-9956.107
ENSAMXG00000012873-9438.816ENSAMXG00000016921znf3415341.935
ENSAMXG00000012873-9860.305ENSAMXG00000031009-8960.938
ENSAMXG00000012873-9051.852ENSAMXG00000029660-5049.327
ENSAMXG00000012873-9142.466ENSAMXG00000041862-9449.123
ENSAMXG00000012873-9052.564ENSAMXG00000038122-9452.632
ENSAMXG00000012873-9958.015ENSAMXG00000033201-9757.422
ENSAMXG00000012873-9843.396ENSAMXG00000037382-7548.193
ENSAMXG00000012873-9653.435ENSAMXG00000041609-9956.690
ENSAMXG00000012873-9751.515ENSAMXG00000032212-9451.515
ENSAMXG00000012873-9158.768ENSAMXG00000033013-8360.804
ENSAMXG00000012873-9353.500ENSAMXG00000032841-8252.000
ENSAMXG00000012873-9552.508ENSAMXG00000030530-9856.154
ENSAMXG00000012873-9853.179ENSAMXG00000031307-8160.177
ENSAMXG00000012873-9160.853ENSAMXG00000035690-7458.273
ENSAMXG00000012873-9561.887ENSAMXG00000029178-9662.121
ENSAMXG00000012873-9654.450ENSAMXG00000043019-9754.450
ENSAMXG00000012873-9557.895ENSAMXG00000009558-9758.052
ENSAMXG00000012873-9853.086ENSAMXG00000043178-7553.086
ENSAMXG00000012873-9759.281ENSAMXG00000042938-9458.506
ENSAMXG00000012873-9355.556ENSAMXG00000034096-8955.556
ENSAMXG00000012873-9164.151ENSAMXG00000033124-5964.151
ENSAMXG00000012873-9236.957ENSAMXG00000005882znf1315636.957
ENSAMXG00000012873-9045.833ENSAMXG00000037544GFI1B5041.844
ENSAMXG00000012873-9956.604ENSAMXG00000029960-9855.172
ENSAMXG00000012873-9558.883ENSAMXG00000031900-9260.963
ENSAMXG00000012873-9657.836ENSAMXG00000010805-9657.836
ENSAMXG00000012873-9462.109ENSAMXG00000039879-9862.109
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000012873-9643.116ENSAPOG00000013511-5643.116Acanthochromis_polyacanthus
ENSAMXG00000012873-9547.598ENSAPOG00000004328-9147.598Acanthochromis_polyacanthus
ENSAMXG00000012873-9643.182ENSACIG00000010739-7944.737Amphilophus_citrinellus
ENSAMXG00000012873-9548.035ENSAOCG00000007045-8648.035Amphiprion_ocellaris
ENSAMXG00000012873-9649.704ENSAPEG00000001596-7849.704Amphiprion_percula
ENSAMXG00000012873-9643.116ENSAPEG00000016483-6943.116Amphiprion_percula
ENSAMXG00000012873-9248.908ENSATEG00000006085-9048.908Anabas_testudineus
ENSAMXG00000012873-9655.344ENSACAG00000025537-10055.344Anolis_carolinensis
ENSAMXG00000012873-9655.939ENSACAG00000000082-9957.422Anolis_carolinensis
ENSAMXG00000012873-9346.360ENSCVAG00000011235-9647.162Cyprinodon_variegatus
ENSAMXG00000012873-9845.017ENSELUG00000013844-8743.624Esox_lucius
ENSAMXG00000012873-9450.847ENSELUG00000013357-8550.847Esox_lucius
ENSAMXG00000012873-9750.988ENSELUG00000021287-8650.988Esox_lucius
ENSAMXG00000012873-9642.606ENSFHEG00000019915-7942.071Fundulus_heteroclitus
ENSAMXG00000012873-9344.141ENSGMOG00000003238-9945.669Gadus_morhua
ENSAMXG00000012873-9146.725ENSGAFG00000012977-9046.725Gambusia_affinis
ENSAMXG00000012873-9643.310ENSGAFG00000003150-9947.059Gambusia_affinis
ENSAMXG00000012873-9455.401ENSIPUG00000006916-8554.264Ictalurus_punctatus
ENSAMXG00000012873-9656.923ENSIPUG00000004428-8955.093Ictalurus_punctatus
ENSAMXG00000012873-9359.649ENSIPUG00000021556-9957.219Ictalurus_punctatus
ENSAMXG00000012873-9547.471ENSKMAG00000004988-9447.471Kryptolebias_marmoratus
ENSAMXG00000012873-9748.387ENSLOCG00000014366-9448.529Lepisosteus_oculatus
ENSAMXG00000012873-9849.780ENSLOCG00000014144-10049.780Lepisosteus_oculatus
ENSAMXG00000012873-9643.478ENSMAMG00000016542-6643.726Mastacembelus_armatus
ENSAMXG00000012873-9547.162ENSMAMG00000019301-9548.214Mastacembelus_armatus
ENSAMXG00000012873-8751.485ENSMMOG00000009852-9351.485Mola_mola
ENSAMXG00000012873-9442.233ENSMALG00000005554-9641.558Monopterus_albus
ENSAMXG00000012873-9148.387ENSOCUG00000005876-10048.536Oryctolagus_cuniculus
ENSAMXG00000012873-9152.105ENSPKIG00000006616-6252.105Paramormyrops_kingsleyae
ENSAMXG00000012873-9646.988ENSPMGG00000017633-8746.988Periophthalmus_magnuspinnatus
ENSAMXG00000012873-9746.288ENSPFOG00000010682-9642.435Poecilia_formosa
ENSAMXG00000012873-9540.541ENSPLAG00000002892-7340.625Poecilia_latipinna
ENSAMXG00000012873-9746.288ENSPMEG00000001399-9046.288Poecilia_mexicana
ENSAMXG00000012873-9746.288ENSPREG00000001386-9046.288Poecilia_reticulata
ENSAMXG00000012873-8941.935ENSPREG00000002582-6637.931Poecilia_reticulata
ENSAMXG00000012873-9458.333ENSPNAG00000000219-9058.333Pygocentrus_nattereri
ENSAMXG00000012873-9163.281ENSPNAG00000015116-7059.524Pygocentrus_nattereri
ENSAMXG00000012873-9844.574ENSPNAG00000025570-9043.662Pygocentrus_nattereri
ENSAMXG00000012873-9249.808ENSSFOG00015006108-5849.808Scleropages_formosus
ENSAMXG00000012873-8856.818ENSSMAG00000009115-9056.818Scophthalmus_maximus
ENSAMXG00000012873-8755.294ENSSDUG00000002195-9744.203Seriola_dumerili
ENSAMXG00000012873-9547.598ENSSDUG00000006463-9345.946Seriola_dumerili
ENSAMXG00000012873-9547.598ENSSLDG00000006724-9948.276Seriola_lalandi_dorsalis
ENSAMXG00000012873-9944.843ENSSLDG00000020727-9750.746Seriola_lalandi_dorsalis
ENSAMXG00000012873-9851.111ENSSPAG00000021008-9651.111Stegastes_partitus
ENSAMXG00000012873-9250.769ENSSPAG00000012960-7950.769Stegastes_partitus
ENSAMXG00000012873-9546.484ENSTRUG00000021675-7746.484Takifugu_rubripes
ENSAMXG00000012873-9646.667ENSTRUG00000005321-9945.098Takifugu_rubripes
ENSAMXG00000012873-9544.531ENSTNIG00000008200-10046.199Tetraodon_nigroviridis
ENSAMXG00000012873-9449.123ENSTNIG00000000320-10051.759Tetraodon_nigroviridis
ENSAMXG00000012873-10053.409ENSXETG00000006575znf4208153.409Xenopus_tropicalis
ENSAMXG00000012873-9547.826ENSXCOG00000009665-8750.435Xiphophorus_couchianus
ENSAMXG00000012873-9746.725ENSXMAG00000028625-9046.725Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us