EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000013376 (Gene tree)
Gene ID: 103042945
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3914 bases
Position: chr9:341042-344955
Accession: 103042945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000013762	PseudoU_synth_2	PF00849.22	4.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000013762	-	2070	XM_007237194	ENSAMXP00000013762	604 (aa)	XP_007237256	W5L1Q0

Gene Model

Click here to download ENSAMXG00000013376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000013376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000013376	rpusd2	84	55.945	ENSG00000166133	RPUSD2	80	57.764	Homo_sapiens
ENSAMXG00000013376	rpusd2	80	66.939	ENSAPOG00000000817	rpusd2	81	66.940	Acanthochromis_polyacanthus
ENSAMXG00000013376	rpusd2	99	50.746	ENSAMEG00000016996	RPUSD2	80	57.113	Ailuropoda_melanoleuca
ENSAMXG00000013376	rpusd2	85	65.444	ENSACIG00000024029	rpusd2	94	65.444	Amphilophus_citrinellus
ENSAMXG00000013376	rpusd2	80	67.629	ENSAOCG00000015237	rpusd2	81	67.490	Amphiprion_ocellaris
ENSAMXG00000013376	rpusd2	80	67.423	ENSAPEG00000021763	rpusd2	81	67.284	Amphiprion_percula
ENSAMXG00000013376	rpusd2	80	67.284	ENSATEG00000015242	rpusd2	80	66.053	Anabas_testudineus
ENSAMXG00000013376	rpusd2	77	58.584	ENSAPLG00000004723	RPUSD2	99	58.584	Anas_platyrhynchos
ENSAMXG00000013376	rpusd2	79	59.081	ENSACAG00000013893	RPUSD2	91	58.664	Anolis_carolinensis
ENSAMXG00000013376	rpusd2	84	56.725	ENSANAG00000009691	RPUSD2	81	57.906	Aotus_nancymaae
ENSAMXG00000013376	rpusd2	80	68.443	ENSACLG00000019531	rpusd2	81	67.689	Astatotilapia_calliptera
ENSAMXG00000013376	rpusd2	86	55.385	ENSBTAG00000003193	RPUSD2	79	57.380	Bos_taurus
ENSAMXG00000013376	rpusd2	60	36.986	WBGene00019498	K07E8.7	75	42.807	Caenorhabditis_elegans
ENSAMXG00000013376	rpusd2	84	56.335	ENSCJAG00000020841	RPUSD2	81	57.700	Callithrix_jacchus
ENSAMXG00000013376	rpusd2	85	56.641	ENSCAFG00000009165	RPUSD2	79	57.143	Canis_familiaris
ENSAMXG00000013376	rpusd2	85	56.641	ENSCAFG00020005849	RPUSD2	79	57.143	Canis_lupus_dingo
ENSAMXG00000013376	rpusd2	99	50.658	ENSCHIG00000006152	RPUSD2	79	57.380	Capra_hircus
ENSAMXG00000013376	rpusd2	87	55.083	ENSTSYG00000012844	RPUSD2	81	56.879	Carlito_syrichta
ENSAMXG00000013376	rpusd2	83	56.088	ENSCPOG00000013201	RPUSD2	81	56.612	Cavia_porcellus
ENSAMXG00000013376	rpusd2	89	54.762	ENSCCAG00000024378	RPUSD2	81	57.700	Cebus_capucinus
ENSAMXG00000013376	rpusd2	83	57.086	ENSCATG00000043734	RPUSD2	81	57.438	Cercocebus_atys
ENSAMXG00000013376	rpusd2	89	55.019	ENSCLAG00000011862	RPUSD2	81	57.645	Chinchilla_lanigera
ENSAMXG00000013376	rpusd2	83	57.086	ENSCSAG00000007538	RPUSD2	86	57.438	Chlorocebus_sabaeus
ENSAMXG00000013376	rpusd2	64	52.320	ENSCHOG00000004834	RPUSD2	63	52.835	Choloepus_hoffmanni
ENSAMXG00000013376	rpusd2	85	59.574	ENSCPBG00000013419	RPUSD2	87	60.707	Chrysemys_picta_bellii
ENSAMXG00000013376	rpusd2	84	56.471	ENSCANG00000003659	RPUSD2	81	57.645	Colobus_angolensis_palliatus
ENSAMXG00000013376	rpusd2	85	55.577	ENSCGRG00001009839	Rpusd2	77	57.438	Cricetulus_griseus_chok1gshd
ENSAMXG00000013376	rpusd2	85	55.577	ENSCGRG00000012348	Rpusd2	79	57.438	Cricetulus_griseus_crigri
ENSAMXG00000013376	rpusd2	85	64.410	ENSCSEG00000001953	rpusd2	79	64.742	Cynoglossus_semilaevis
ENSAMXG00000013376	rpusd2	88	65.421	ENSCVAG00000010848	rpusd2	80	66.804	Cyprinodon_variegatus
ENSAMXG00000013376	rpusd2	87	68.750	ENSDARG00000060992	rpusd2	84	69.318	Danio_rerio
ENSAMXG00000013376	rpusd2	89	54.059	ENSDNOG00000047745	RPUSD2	81	56.584	Dasypus_novemcinctus
ENSAMXG00000013376	rpusd2	79	57.620	ENSDORG00000009092	Rpusd2	100	56.639	Dipodomys_ordii
ENSAMXG00000013376	rpusd2	90	42.173	FBgn0032256	RluA-2	77	45.887	Drosophila_melanogaster
ENSAMXG00000013376	rpusd2	96	40.068	FBgn0051719	RluA-1	62	45.494	Drosophila_melanogaster
ENSAMXG00000013376	rpusd2	83	56.287	ENSETEG00000008581	RPUSD2	82	57.025	Echinops_telfairi
ENSAMXG00000013376	rpusd2	77	33.191	ENSEBUG00000012149	rpusd2	78	39.350	Eptatretus_burgeri
ENSAMXG00000013376	rpusd2	89	55.331	ENSEASG00005016463	RPUSD2	79	57.645	Equus_asinus_asinus
ENSAMXG00000013376	rpusd2	89	55.331	ENSECAG00000024178	RPUSD2	79	57.645	Equus_caballus
ENSAMXG00000013376	rpusd2	83	50.499	ENSEEUG00000005132	RPUSD2	83	50.830	Erinaceus_europaeus
ENSAMXG00000013376	rpusd2	86	65.896	ENSELUG00000016786	rpusd2	88	64.368	Esox_lucius
ENSAMXG00000013376	rpusd2	89	55.288	ENSFCAG00000040796	RPUSD2	79	57.320	Felis_catus
ENSAMXG00000013376	rpusd2	78	59.534	ENSFALG00000001122	RPUSD2	96	58.452	Ficedula_albicollis
ENSAMXG00000013376	rpusd2	87	53.519	ENSFDAG00000003070	RPUSD2	86	56.818	Fukomys_damarensis
ENSAMXG00000013376	rpusd2	93	60.708	ENSFHEG00000007518	rpusd2	87	63.429	Fundulus_heteroclitus
ENSAMXG00000013376	rpusd2	80	64.876	ENSGMOG00000011014	rpusd2	99	64.423	Gadus_morhua
ENSAMXG00000013376	rpusd2	87	58.175	ENSGALG00000041216	RPUSD2	94	59.794	Gallus_gallus
ENSAMXG00000013376	rpusd2	88	62.617	ENSGAFG00000003390	rpusd2	78	64.948	Gambusia_affinis
ENSAMXG00000013376	rpusd2	88	62.172	ENSGACG00000008656	rpusd2	94	64.093	Gasterosteus_aculeatus
ENSAMXG00000013376	rpusd2	84	59.763	ENSGAGG00000013098	RPUSD2	84	59.667	Gopherus_agassizii
ENSAMXG00000013376	rpusd2	84	55.361	ENSGGOG00000006684	RPUSD2	80	56.584	Gorilla_gorilla
ENSAMXG00000013376	rpusd2	80	68.443	ENSHBUG00000023777	rpusd2	81	67.689	Haplochromis_burtoni
ENSAMXG00000013376	rpusd2	85	54.581	ENSHGLG00000012765	RPUSD2	80	56.405	Heterocephalus_glaber_female
ENSAMXG00000013376	rpusd2	85	54.581	ENSHGLG00100006653	RPUSD2	80	56.405	Heterocephalus_glaber_male
ENSAMXG00000013376	rpusd2	90	63.686	ENSHCOG00000015587	rpusd2	84	65.333	Hippocampus_comes
ENSAMXG00000013376	rpusd2	88	71.053	ENSIPUG00000021006	rpusd2	78	73.361	Ictalurus_punctatus
ENSAMXG00000013376	rpusd2	93	53.873	ENSSTOG00000025619	RPUSD2	79	57.732	Ictidomys_tridecemlineatus
ENSAMXG00000013376	rpusd2	80	58.763	ENSJJAG00000023160	Rpusd2	82	58.763	Jaculus_jaculus
ENSAMXG00000013376	rpusd2	88	65.672	ENSKMAG00000006618	rpusd2	84	66.990	Kryptolebias_marmoratus
ENSAMXG00000013376	rpusd2	80	68.098	ENSLBEG00000021571	rpusd2	85	67.113	Labrus_bergylta
ENSAMXG00000013376	rpusd2	79	60.206	ENSLACG00000017338	RPUSD2	100	59.343	Latimeria_chalumnae
ENSAMXG00000013376	rpusd2	80	66.255	ENSLOCG00000014755	rpusd2	90	65.580	Lepisosteus_oculatus
ENSAMXG00000013376	rpusd2	84	56.863	ENSLAFG00000015588	RPUSD2	82	58.212	Loxodonta_africana
ENSAMXG00000013376	rpusd2	83	57.285	ENSMFAG00000045062	RPUSD2	81	57.645	Macaca_fascicularis
ENSAMXG00000013376	rpusd2	87	55.370	ENSMMUG00000001483	RPUSD2	81	57.645	Macaca_mulatta
ENSAMXG00000013376	rpusd2	83	50.000	ENSMNEG00000041429	RPUSD2	81	49.898	Macaca_nemestrina
ENSAMXG00000013376	rpusd2	64	54.381	ENSMLEG00000036551	RPUSD2	81	53.608	Mandrillus_leucophaeus
ENSAMXG00000013376	rpusd2	80	65.784	ENSMAMG00000001077	rpusd2	79	65.244	Mastacembelus_armatus
ENSAMXG00000013376	rpusd2	80	68.443	ENSMZEG00005006947	rpusd2	89	67.689	Maylandia_zebra
ENSAMXG00000013376	rpusd2	82	59.759	ENSMGAG00000003058	RPUSD2	97	60.000	Meleagris_gallopavo
ENSAMXG00000013376	rpusd2	99	51.724	ENSMAUG00000020467	Rpusd2	79	57.851	Mesocricetus_auratus
ENSAMXG00000013376	rpusd2	88	55.388	ENSMICG00000028637	RPUSD2	81	57.645	Microcebus_murinus
ENSAMXG00000013376	rpusd2	82	57.631	ENSMOCG00000020061	Rpusd2	79	56.818	Microtus_ochrogaster
ENSAMXG00000013376	rpusd2	80	64.969	ENSMMOG00000012020	rpusd2	86	64.231	Mola_mola
ENSAMXG00000013376	rpusd2	87	54.696	ENSMODG00000000300	RPUSD2	81	58.058	Monodelphis_domestica
ENSAMXG00000013376	rpusd2	80	65.235	ENSMALG00000010024	rpusd2	80	64.959	Monopterus_albus
ENSAMXG00000013376	rpusd2	99	51.471	MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.438	Mus_caroli
ENSAMXG00000013376	rpusd2	99	50.817	ENSMUSG00000027324	Rpusd2	78	57.851	Mus_musculus
ENSAMXG00000013376	rpusd2	99	49.838	MGP_PahariEiJ_G0025573	Rpusd2	78	57.231	Mus_pahari
ENSAMXG00000013376	rpusd2	99	50.575	MGP_SPRETEiJ_G0025046	Rpusd2	79	58.058	Mus_spretus
ENSAMXG00000013376	rpusd2	88	54.323	ENSMPUG00000008517	RPUSD2	79	56.936	Mustela_putorius_furo
ENSAMXG00000013376	rpusd2	84	56.667	ENSMLUG00000007971	RPUSD2	94	55.067	Myotis_lucifugus
ENSAMXG00000013376	rpusd2	85	56.311	ENSNGAG00000014126	Rpusd2	85	55.773	Nannospalax_galili
ENSAMXG00000013376	rpusd2	80	66.803	ENSNBRG00000010070	rpusd2	84	62.738	Neolamprologus_brichardi
ENSAMXG00000013376	rpusd2	92	53.131	ENSNLEG00000035735	RPUSD2	80	56.996	Nomascus_leucogenys
ENSAMXG00000013376	rpusd2	88	55.955	ENSMEUG00000008500	RPUSD2	84	58.471	Notamacropus_eugenii
ENSAMXG00000013376	rpusd2	84	54.706	ENSOPRG00000014177	-	81	56.405	Ochotona_princeps
ENSAMXG00000013376	rpusd2	89	54.833	ENSODEG00000017193	RPUSD2	82	57.851	Octodon_degus
ENSAMXG00000013376	rpusd2	80	66.049	ENSONIG00000020102	rpusd2	88	66.667	Oreochromis_niloticus
ENSAMXG00000013376	rpusd2	89	55.204	ENSOCUG00000015745	RPUSD2	86	54.409	Oryctolagus_cuniculus
ENSAMXG00000013376	rpusd2	89	64.088	ENSORLG00000015516	rpusd2	86	65.192	Oryzias_latipes
ENSAMXG00000013376	rpusd2	86	64.865	ENSORLG00020010533	rpusd2	86	64.672	Oryzias_latipes_hni
ENSAMXG00000013376	rpusd2	86	64.615	ENSORLG00015009206	rpusd2	86	64.423	Oryzias_latipes_hsok
ENSAMXG00000013376	rpusd2	85	65.251	ENSOMEG00000007355	rpusd2	73	78.022	Oryzias_melastigma
ENSAMXG00000013376	rpusd2	96	51.993	ENSOGAG00000004867	RPUSD2	84	57.231	Otolemur_garnettii
ENSAMXG00000013376	rpusd2	80	58.004	ENSOARG00000020235	RPUSD2	80	57.588	Ovis_aries
ENSAMXG00000013376	rpusd2	88	54.869	ENSPPAG00000032874	RPUSD2	80	57.202	Pan_paniscus
ENSAMXG00000013376	rpusd2	80	58.799	ENSPPRG00000010446	RPUSD2	80	57.971	Panthera_pardus
ENSAMXG00000013376	rpusd2	99	51.248	ENSPTIG00000013316	RPUSD2	80	57.971	Panthera_tigris_altaica
ENSAMXG00000013376	rpusd2	88	54.869	ENSPTRG00000006924	RPUSD2	80	57.764	Pan_troglodytes
ENSAMXG00000013376	rpusd2	83	57.285	ENSPANG00000019339	RPUSD2	81	57.645	Papio_anubis
ENSAMXG00000013376	rpusd2	81	65.571	ENSPKIG00000023017	rpusd2	77	66.019	Paramormyrops_kingsleyae
ENSAMXG00000013376	rpusd2	64	56.623	ENSPSIG00000012680	RPUSD2	99	56.104	Pelodiscus_sinensis
ENSAMXG00000013376	rpusd2	64	78.248	ENSPMGG00000018165	rpusd2	77	78.248	Periophthalmus_magnuspinnatus
ENSAMXG00000013376	rpusd2	99	50.664	ENSPEMG00000012878	Rpusd2	81	57.971	Peromyscus_maniculatus_bairdii
ENSAMXG00000013376	rpusd2	83	56.313	ENSPCIG00000023199	RPUSD2	80	57.231	Phascolarctos_cinereus
ENSAMXG00000013376	rpusd2	88	64.595	ENSPFOG00000006829	rpusd2	85	65.451	Poecilia_formosa
ENSAMXG00000013376	rpusd2	88	64.407	ENSPLAG00000022914	rpusd2	96	65.451	Poecilia_latipinna
ENSAMXG00000013376	rpusd2	88	64.407	ENSPMEG00000009835	rpusd2	96	65.259	Poecilia_mexicana
ENSAMXG00000013376	rpusd2	97	59.796	ENSPREG00000016441	rpusd2	76	65.773	Poecilia_reticulata
ENSAMXG00000013376	rpusd2	85	56.031	ENSPPYG00000006355	RPUSD2	80	57.202	Pongo_abelii
ENSAMXG00000013376	rpusd2	82	57.229	ENSPCOG00000028019	RPUSD2	81	57.438	Propithecus_coquereli
ENSAMXG00000013376	rpusd2	83	57.769	ENSPVAG00000001837	RPUSD2	80	57.764	Pteropus_vampyrus
ENSAMXG00000013376	rpusd2	80	67.490	ENSPNYG00000021507	rpusd2	87	66.735	Pundamilia_nyererei
ENSAMXG00000013376	rpusd2	99	50.656	ENSRNOG00000010528	LOC100911166	78	58.058	Rattus_norvegicus
ENSAMXG00000013376	rpusd2	99	50.656	ENSRNOG00000046797	Rpusd2	78	58.058	Rattus_norvegicus
ENSAMXG00000013376	rpusd2	87	55.370	ENSRBIG00000030813	RPUSD2	81	57.645	Rhinopithecus_bieti
ENSAMXG00000013376	rpusd2	87	55.185	ENSRROG00000026664	RPUSD2	81	57.438	Rhinopithecus_roxellana
ENSAMXG00000013376	rpusd2	84	56.725	ENSSBOG00000035031	RPUSD2	81	58.111	Saimiri_boliviensis_boliviensis
ENSAMXG00000013376	rpusd2	64	55.013	ENSSHAG00000015108	RPUSD2	91	53.985	Sarcophilus_harrisii
ENSAMXG00000013376	rpusd2	80	62.791	ENSSFOG00015019057	rpusd2	77	62.840	Scleropages_formosus
ENSAMXG00000013376	rpusd2	85	67.442	ENSSMAG00000000903	rpusd2	94	67.245	Scophthalmus_maximus
ENSAMXG00000013376	rpusd2	87	65.094	ENSSDUG00000019139	rpusd2	86	64.916	Seriola_dumerili
ENSAMXG00000013376	rpusd2	87	64.906	ENSSLDG00000005938	rpusd2	86	64.474	Seriola_lalandi_dorsalis
ENSAMXG00000013376	rpusd2	89	55.926	ENSSARG00000002792	RPUSD2	81	58.144	Sorex_araneus
ENSAMXG00000013376	rpusd2	83	57.255	ENSSPUG00000001206	RPUSD2	88	57.172	Sphenodon_punctatus
ENSAMXG00000013376	rpusd2	80	67.485	ENSSPAG00000003578	rpusd2	85	66.092	Stegastes_partitus
ENSAMXG00000013376	rpusd2	89	55.390	ENSSSCG00000036700	RPUSD2	79	56.549	Sus_scrofa
ENSAMXG00000013376	rpusd2	85	65.192	ENSTRUG00000025880	rpusd2	94	64.885	Takifugu_rubripes
ENSAMXG00000013376	rpusd2	85	65.192	ENSTNIG00000017329	rpusd2	95	66.085	Tetraodon_nigroviridis
ENSAMXG00000013376	rpusd2	87	50.185	ENSTBEG00000007933	RPUSD2	80	51.553	Tupaia_belangeri
ENSAMXG00000013376	rpusd2	89	56.401	ENSTTRG00000010585	RPUSD2	80	58.264	Tursiops_truncatus
ENSAMXG00000013376	rpusd2	85	56.226	ENSUAMG00000001470	RPUSD2	86	57.526	Ursus_americanus
ENSAMXG00000013376	rpusd2	85	56.226	ENSUMAG00000012487	RPUSD2	71	57.526	Ursus_maritimus
ENSAMXG00000013376	rpusd2	99	51.550	ENSVPAG00000003844	RPUSD2	81	58.144	Vicugna_pacos
ENSAMXG00000013376	rpusd2	85	56.250	ENSVVUG00000026590	RPUSD2	79	56.936	Vulpes_vulpes
ENSAMXG00000013376	rpusd2	82	57.778	ENSXETG00000015973	rpusd2	95	58.958	Xenopus_tropicalis
ENSAMXG00000013376	rpusd2	87	63.396	ENSXMAG00000021821	rpusd2	89	64.330	Xiphophorus_maculatus