EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000013677 (Gene tree)
Gene ID: 103042128
Gene Symbol: sympk
Alias: si:dkeyp-117b8.1
Full Name: symplekin
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10531 bases
Position: chr3:11639082-11649612
Accession: 103042128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014067	Symplekin_C	PF12295.8	1.1e-72	1	1
ENSAMXP00000045063	Symplekin_C	PF12295.8	1.1e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000014067	-	3630	XM_007260358	ENSAMXP00000014067	1209 (aa)	XP_007260420	W5L2K5
ENSAMXT00000038677	-	3639	-	ENSAMXP00000045063	1212 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000013677's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03015	mRNA surveillance pathway	KEGG
amex04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000013677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000013677	sympk	92	73.810	ENSG00000125755	SYMPK	100	75.352	Homo_sapiens
ENSAMXG00000013677	sympk	89	85.106	ENSAPOG00000015934	sympk	98	81.853	Acanthochromis_polyacanthus
ENSAMXG00000013677	sympk	91	74.487	ENSAMEG00000000680	SYMPK	89	73.154	Ailuropoda_melanoleuca
ENSAMXG00000013677	sympk	89	83.210	ENSACIG00000006357	sympk	91	82.934	Amphilophus_citrinellus
ENSAMXG00000013677	sympk	94	81.558	ENSAOCG00000024124	sympk	93	82.878	Amphiprion_ocellaris
ENSAMXG00000013677	sympk	94	81.472	ENSAPEG00000003465	sympk	89	84.263	Amphiprion_percula
ENSAMXG00000013677	sympk	94	81.407	ENSATEG00000008472	sympk	92	81.706	Anabas_testudineus
ENSAMXG00000013677	sympk	87	71.388	ENSACAG00000004126	SYMPK	84	72.861	Anolis_carolinensis
ENSAMXG00000013677	sympk	91	74.531	ENSANAG00000021087	SYMPK	99	74.251	Aotus_nancymaae
ENSAMXG00000013677	sympk	92	82.400	ENSACLG00000001813	sympk	91	82.400	Astatotilapia_calliptera
ENSAMXG00000013677	sympk	91	74.041	ENSBTAG00000012101	SYMPK	89	72.498	Bos_taurus
ENSAMXG00000013677	sympk	90	74.552	ENSCJAG00000012172	SYMPK	99	72.753	Callithrix_jacchus
ENSAMXG00000013677	sympk	91	74.309	ENSCAFG00000004376	SYMPK	89	72.980	Canis_familiaris
ENSAMXG00000013677	sympk	91	74.309	ENSCAFG00020001815	SYMPK	89	72.980	Canis_lupus_dingo
ENSAMXG00000013677	sympk	91	74.041	ENSCHIG00000026784	SYMPK	89	72.585	Capra_hircus
ENSAMXG00000013677	sympk	92	73.263	ENSTSYG00000006268	SYMPK	95	72.230	Carlito_syrichta
ENSAMXG00000013677	sympk	87	72.253	ENSCAPG00000005112	SYMPK	96	71.933	Cavia_aperea
ENSAMXG00000013677	sympk	94	72.696	ENSCPOG00000010434	SYMPK	91	72.399	Cavia_porcellus
ENSAMXG00000013677	sympk	91	74.508	ENSCCAG00000036309	SYMPK	99	74.050	Cebus_capucinus
ENSAMXG00000013677	sympk	91	74.487	ENSCATG00000045107	SYMPK	99	74.026	Cercocebus_atys
ENSAMXG00000013677	sympk	95	71.574	ENSCLAG00000001206	SYMPK	89	72.468	Chinchilla_lanigera
ENSAMXG00000013677	sympk	91	74.487	ENSCSAG00000003115	SYMPK	89	73.067	Chlorocebus_sabaeus
ENSAMXG00000013677	sympk	71	87.879	ENSCHOG00000012456	SYMPK	81	87.879	Choloepus_hoffmanni
ENSAMXG00000013677	sympk	90	73.886	ENSCPBG00000007170	SYMPK	90	73.111	Chrysemys_picta_bellii
ENSAMXG00000013677	sympk	87	48.183	ENSCING00000021232	-	97	47.903	Ciona_intestinalis
ENSAMXG00000013677	sympk	85	47.727	ENSCSAVG00000005154	-	100	48.674	Ciona_savignyi
ENSAMXG00000013677	sympk	91	73.357	ENSCANG00000040907	SYMPK	99	72.354	Colobus_angolensis_palliatus
ENSAMXG00000013677	sympk	86	73.582	ENSCGRG00001010086	Sympk	86	74.429	Cricetulus_griseus_chok1gshd
ENSAMXG00000013677	sympk	90	82.971	ENSCSEG00000016802	sympk	90	82.971	Cynoglossus_semilaevis
ENSAMXG00000013677	sympk	97	81.796	ENSDARG00000059553	sympk	92	83.679	Danio_rerio
ENSAMXG00000013677	sympk	91	73.689	ENSDNOG00000016149	SYMPK	89	72.593	Dasypus_novemcinctus
ENSAMXG00000013677	sympk	88	36.405	FBgn0037371	Sym	93	36.495	Drosophila_melanogaster
ENSAMXG00000013677	sympk	71	59.347	ENSEBUG00000000387	sympk	91	59.459	Eptatretus_burgeri
ENSAMXG00000013677	sympk	91	74.398	ENSEASG00005014227	SYMPK	89	73.067	Equus_asinus_asinus
ENSAMXG00000013677	sympk	91	74.398	ENSECAG00000008163	SYMPK	89	73.067	Equus_caballus
ENSAMXG00000013677	sympk	71	74.652	ENSEEUG00000000270	-	79	74.652	Erinaceus_europaeus
ENSAMXG00000013677	sympk	91	82.780	ENSELUG00000000850	sympk	91	81.180	Esox_lucius
ENSAMXG00000013677	sympk	91	74.309	ENSFCAG00000007337	SYMPK	89	72.980	Felis_catus
ENSAMXG00000013677	sympk	92	73.498	ENSFDAG00000011272	SYMPK	89	72.617	Fukomys_damarensis
ENSAMXG00000013677	sympk	90	82.557	ENSFHEG00000010274	sympk	95	79.412	Fundulus_heteroclitus
ENSAMXG00000013677	sympk	88	80.354	ENSGMOG00000002357	sympk	99	80.447	Gadus_morhua
ENSAMXG00000013677	sympk	90	82.267	ENSGAFG00000010976	sympk	93	80.106	Gambusia_affinis
ENSAMXG00000013677	sympk	93	80.335	ENSGACG00000002735	sympk	99	80.622	Gasterosteus_aculeatus
ENSAMXG00000013677	sympk	57	72.468	ENSGAGG00000012538	-	87	71.624	Gopherus_agassizii
ENSAMXG00000013677	sympk	91	74.222	ENSGGOG00000003410	SYMPK	97	73.679	Gorilla_gorilla
ENSAMXG00000013677	sympk	92	82.400	ENSHBUG00000023564	sympk	91	82.400	Haplochromis_burtoni
ENSAMXG00000013677	sympk	91	70.205	ENSHGLG00000005228	SYMPK	89	68.983	Heterocephalus_glaber_female
ENSAMXG00000013677	sympk	91	74.309	ENSHGLG00100018571	SYMPK	89	73.998	Heterocephalus_glaber_male
ENSAMXG00000013677	sympk	88	77.685	ENSHCOG00000017400	sympk	90	77.222	Hippocampus_comes
ENSAMXG00000013677	sympk	97	86.751	ENSIPUG00000024020	SYMPK	95	87.004	Ictalurus_punctatus
ENSAMXG00000013677	sympk	91	74.576	ENSSTOG00000001534	SYMPK	89	73.241	Ictidomys_tridecemlineatus
ENSAMXG00000013677	sympk	95	71.806	ENSJJAG00000006633	Sympk	89	72.141	Jaculus_jaculus
ENSAMXG00000013677	sympk	89	84.066	ENSKMAG00000016292	sympk	91	81.940	Kryptolebias_marmoratus
ENSAMXG00000013677	sympk	89	83.838	ENSLBEG00000027913	sympk	95	80.297	Labrus_bergylta
ENSAMXG00000013677	sympk	90	69.106	ENSLACG00000016497	SYMPK	93	68.528	Latimeria_chalumnae
ENSAMXG00000013677	sympk	91	74.665	ENSLAFG00000008726	SYMPK	89	73.328	Loxodonta_africana
ENSAMXG00000013677	sympk	91	74.487	ENSMMUG00000015428	SYMPK	93	72.851	Macaca_mulatta
ENSAMXG00000013677	sympk	93	73.455	ENSMNEG00000019439	SYMPK	99	74.119	Macaca_nemestrina
ENSAMXG00000013677	sympk	93	73.368	ENSMLEG00000040508	SYMPK	99	74.026	Mandrillus_leucophaeus
ENSAMXG00000013677	sympk	94	81.581	ENSMAMG00000010486	sympk	90	83.454	Mastacembelus_armatus
ENSAMXG00000013677	sympk	92	82.400	ENSMZEG00005014146	sympk	91	82.400	Maylandia_zebra
ENSAMXG00000013677	sympk	90	73.604	ENSMAUG00000015657	Sympk	89	71.615	Mesocricetus_auratus
ENSAMXG00000013677	sympk	91	73.952	ENSMICG00000001871	SYMPK	92	71.811	Microcebus_murinus
ENSAMXG00000013677	sympk	91	73.863	ENSMOCG00000008388	Sympk	89	72.585	Microtus_ochrogaster
ENSAMXG00000013677	sympk	95	78.007	ENSMMOG00000019227	sympk	96	79.539	Mola_mola
ENSAMXG00000013677	sympk	90	74.396	ENSMODG00000021534	SYMPK	88	73.257	Monodelphis_domestica
ENSAMXG00000013677	sympk	77	78.215	ENSMALG00000008347	sympk	96	78.640	Monopterus_albus
ENSAMXG00000013677	sympk	91	73.684	MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	Mus_caroli
ENSAMXG00000013677	sympk	91	73.595	ENSMUSG00000023118	Sympk	76	87.156	Mus_musculus
ENSAMXG00000013677	sympk	91	73.684	MGP_PahariEiJ_G0021127	Sympk	77	87.156	Mus_pahari
ENSAMXG00000013677	sympk	91	73.684	MGP_SPRETEiJ_G0030351	-	77	87.156	Mus_spretus
ENSAMXG00000013677	sympk	91	73.101	ENSMPUG00000005505	SYMPK	89	71.802	Mustela_putorius_furo
ENSAMXG00000013677	sympk	73	72.321	ENSMLUG00000001359	SYMPK	91	70.378	Myotis_lucifugus
ENSAMXG00000013677	sympk	91	74.130	ENSNGAG00000000820	Sympk	89	72.743	Nannospalax_galili
ENSAMXG00000013677	sympk	89	82.648	ENSNBRG00000018101	sympk	93	82.648	Neolamprologus_brichardi
ENSAMXG00000013677	sympk	91	61.788	ENSNLEG00000002369	SYMPK	88	62.912	Nomascus_leucogenys
ENSAMXG00000013677	sympk	76	73.667	ENSMEUG00000003866	SYMPK	71	82.101	Notamacropus_eugenii
ENSAMXG00000013677	sympk	92	71.555	ENSOPRG00000009967	SYMPK	89	70.757	Ochotona_princeps
ENSAMXG00000013677	sympk	93	73.020	ENSODEG00000007519	SYMPK	92	70.719	Octodon_degus
ENSAMXG00000013677	sympk	93	81.498	ENSONIG00000016802	sympk	97	81.498	Oreochromis_niloticus
ENSAMXG00000013677	sympk	79	72.456	ENSOCUG00000005511	SYMPK	90	72.103	Oryctolagus_cuniculus
ENSAMXG00000013677	sympk	91	82.558	ENSORLG00000015338	sympk	96	82.030	Oryzias_latipes
ENSAMXG00000013677	sympk	91	82.484	ENSORLG00020004402	sympk	92	82.379	Oryzias_latipes_hni
ENSAMXG00000013677	sympk	91	82.484	ENSORLG00015005712	sympk	92	82.379	Oryzias_latipes_hsok
ENSAMXG00000013677	sympk	96	79.915	ENSOMEG00000022561	sympk	93	82.384	Oryzias_melastigma
ENSAMXG00000013677	sympk	91	74.398	ENSOGAG00000013483	SYMPK	89	73.067	Otolemur_garnettii
ENSAMXG00000013677	sympk	89	71.480	ENSOARG00000010349	SYMPK	90	68.998	Ovis_aries
ENSAMXG00000013677	sympk	92	73.810	ENSPPAG00000043204	SYMPK	94	72.715	Pan_paniscus
ENSAMXG00000013677	sympk	91	74.398	ENSPPRG00000004282	SYMPK	89	73.067	Panthera_pardus
ENSAMXG00000013677	sympk	91	74.398	ENSPTIG00000015420	SYMPK	93	74.087	Panthera_tigris_altaica
ENSAMXG00000013677	sympk	92	73.810	ENSPTRG00000011169	SYMPK	94	72.715	Pan_troglodytes
ENSAMXG00000013677	sympk	91	74.487	ENSPANG00000019930	SYMPK	99	74.026	Papio_anubis
ENSAMXG00000013677	sympk	90	85.536	ENSPKIG00000017132	sympk	96	80.255	Paramormyrops_kingsleyae
ENSAMXG00000013677	sympk	91	73.863	ENSPEMG00000007564	Sympk	89	72.585	Peromyscus_maniculatus_bairdii
ENSAMXG00000013677	sympk	84	64.525	ENSPMAG00000004936	sympk	100	64.779	Petromyzon_marinus
ENSAMXG00000013677	sympk	95	71.453	ENSPCIG00000024476	SYMPK	93	70.965	Phascolarctos_cinereus
ENSAMXG00000013677	sympk	90	82.541	ENSPFOG00000001194	sympk	97	77.806	Poecilia_formosa
ENSAMXG00000013677	sympk	90	82.541	ENSPLAG00000012995	sympk	97	77.806	Poecilia_latipinna
ENSAMXG00000013677	sympk	90	82.541	ENSPMEG00000008099	sympk	97	77.806	Poecilia_mexicana
ENSAMXG00000013677	sympk	89	82.569	ENSPREG00000006176	sympk	93	80.149	Poecilia_reticulata
ENSAMXG00000013677	sympk	90	74.214	ENSPPYG00000010135	SYMPK	99	73.812	Pongo_abelii
ENSAMXG00000013677	sympk	85	78.049	ENSPCAG00000005182	SYMPK	83	74.948	Procavia_capensis
ENSAMXG00000013677	sympk	93	72.846	ENSPCOG00000023740	SYMPK	99	73.395	Propithecus_coquereli
ENSAMXG00000013677	sympk	91	72.881	ENSPVAG00000001355	SYMPK	91	71.590	Pteropus_vampyrus
ENSAMXG00000013677	sympk	92	82.044	ENSPNYG00000011455	sympk	90	82.044	Pundamilia_nyererei
ENSAMXG00000013677	sympk	97	91.085	ENSPNAG00000016505	sympk	95	91.085	Pygocentrus_nattereri
ENSAMXG00000013677	sympk	91	73.863	ENSRNOG00000014353	Sympk	89	72.585	Rattus_norvegicus
ENSAMXG00000013677	sympk	91	74.487	ENSRBIG00000040963	SYMPK	99	74.227	Rhinopithecus_bieti
ENSAMXG00000013677	sympk	91	74.487	ENSRROG00000024834	SYMPK	97	73.892	Rhinopithecus_roxellana
ENSAMXG00000013677	sympk	91	74.441	ENSSBOG00000034497	SYMPK	95	72.851	Saimiri_boliviensis_boliviensis
ENSAMXG00000013677	sympk	93	71.639	ENSSHAG00000003139	SYMPK	99	71.515	Sarcophilus_harrisii
ENSAMXG00000013677	sympk	94	81.943	ENSSFOG00015006974	sympk	92	81.513	Scleropages_formosus
ENSAMXG00000013677	sympk	95	80.311	ENSSMAG00000018130	sympk	74	81.036	Scophthalmus_maximus
ENSAMXG00000013677	sympk	95	81.261	ENSSDUG00000007092	sympk	92	81.914	Seriola_dumerili
ENSAMXG00000013677	sympk	95	81.261	ENSSLDG00000014774	sympk	96	81.400	Seriola_lalandi_dorsalis
ENSAMXG00000013677	sympk	58	84.615	ENSSARG00000004274	-	61	84.615	Sorex_araneus
ENSAMXG00000013677	sympk	92	73.164	ENSSPUG00000002789	SYMPK	85	74.217	Sphenodon_punctatus
ENSAMXG00000013677	sympk	90	84.426	ENSSPAG00000000854	sympk	90	83.664	Stegastes_partitus
ENSAMXG00000013677	sympk	91	74.309	ENSSSCG00000003093	SYMPK	89	72.893	Sus_scrofa
ENSAMXG00000013677	sympk	90	82.230	ENSTRUG00000010202	sympk	91	82.049	Takifugu_rubripes
ENSAMXG00000013677	sympk	89	82.035	ENSTNIG00000017855	sympk	98	81.025	Tetraodon_nigroviridis
ENSAMXG00000013677	sympk	79	88.312	ENSTBEG00000000454	SYMPK	76	88.312	Tupaia_belangeri
ENSAMXG00000013677	sympk	91	65.923	ENSTTRG00000014311	SYMPK	89	64.726	Tursiops_truncatus
ENSAMXG00000013677	sympk	96	70.220	ENSUAMG00000022272	SYMPK	95	71.970	Ursus_americanus
ENSAMXG00000013677	sympk	91	74.487	ENSUMAG00000023698	SYMPK	89	73.154	Ursus_maritimus
ENSAMXG00000013677	sympk	91	74.309	ENSVVUG00000003024	SYMPK	97	73.998	Vulpes_vulpes
ENSAMXG00000013677	sympk	90	67.658	ENSXETG00000024453	sympk	91	67.870	Xenopus_tropicalis
ENSAMXG00000013677	sympk	88	80.833	ENSXCOG00000015368	sympk	99	80.741	Xiphophorus_couchianus
ENSAMXG00000013677	sympk	90	82.358	ENSXMAG00000005737	sympk	95	78.621	Xiphophorus_maculatus