EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000013711 (Gene tree)
Gene ID: 103034330
Gene Symbol: sept12
Alias: si:dkey-23a11.2
Full Name: neuronal-specific septin-3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 174935 bases
Position: chr2:27850009-28024943
Accession: 103034330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000031624	MMR_HSR1	PF01926.23	2.1e-07	1	1
ENSAMXP00000014114	MMR_HSR1	PF01926.23	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055037	-	5563	XM_022675828	ENSAMXP00000031624	382 (aa)	XP_022531549	UPI000BBD5BC4
ENSAMXT00000014114	-	7203	XM_022675825	ENSAMXP00000014114	833 (aa)	XP_022531546	W5L2Q2

Gene Model

Click here to download ENSAMXG00000013711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000013711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000013711	sept12	83	70.219	ENSAMXG00000034678	sept9a	57	72.757
ENSAMXG00000013711	sept12	68	50.570	ENSAMXG00000037346	SEPT4	78	50.763
ENSAMXG00000013711	sept12	89	66.667	ENSAMXG00000018729	sept3	92	69.524
ENSAMXG00000013711	sept12	77	49.153	ENSAMXG00000006159	sept5a	79	49.658
ENSAMXG00000013711	sept12	79	72.425	ENSAMXG00000043013	sept9b	88	72.425
ENSAMXG00000013711	sept12	75	48.958	ENSAMXG00000020058	sept4a	64	48.958
ENSAMXG00000013711	sept12	77	40.816	ENSAMXG00000018970	sept8b	67	40.816
ENSAMXG00000013711	sept12	78	48.829	ENSAMXG00000017358	sept7a	71	48.829
ENSAMXG00000013711	sept12	80	46.753	ENSAMXG00000039525	sept2	86	46.753
ENSAMXG00000013711	sept12	75	44.948	ENSAMXG00000031256	zgc:162239	90	44.948
ENSAMXG00000013711	sept12	77	48.136	ENSAMXG00000006164	zgc:63587	86	48.797
ENSAMXG00000013711	sept12	77	41.156	ENSAMXG00000033660	sept6	67	41.156
ENSAMXG00000013711	sept12	81	48.052	ENSAMXG00000039803	sept15	70	47.883
ENSAMXG00000013711	sept12	77	41.837	ENSAMXG00000020162	sept8a	69	41.837
ENSAMXG00000013711	sept12	71	48.162	ENSAMXG00000024643	sept7b	68	48.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000013711	sept12	78	68.350	ENSG00000140623	SEPT12	87	65.705	Homo_sapiens
ENSAMXG00000013711	sept12	78	67.677	ENSAMEG00000001746	SEPT12	86	65.909	Ailuropoda_melanoleuca
ENSAMXG00000013711	sept12	99	78.125	ENSATEG00000007502	sept12	91	87.500	Anabas_testudineus
ENSAMXG00000013711	sept12	82	75.962	ENSACAG00000000531	-	92	75.962	Anolis_carolinensis
ENSAMXG00000013711	sept12	82	64.537	ENSANAG00000035914	SEPT12	87	64.537	Aotus_nancymaae
ENSAMXG00000013711	sept12	77	67.797	ENSBTAG00000016330	SEPT12	84	66.230	Bos_taurus
ENSAMXG00000013711	sept12	78	69.697	ENSCAFG00000019171	SEPT12	83	69.697	Canis_familiaris
ENSAMXG00000013711	sept12	78	58.923	ENSCAFG00020024938	SEPT12	92	64.015	Canis_lupus_dingo
ENSAMXG00000013711	sept12	80	66.557	ENSCHIG00000013270	SEPT12	87	66.557	Capra_hircus
ENSAMXG00000013711	sept12	82	64.127	ENSTSYG00000008537	SEPT12	90	62.654	Carlito_syrichta
ENSAMXG00000013711	sept12	76	66.667	ENSCAPG00000013691	SEPT12	82	65.320	Cavia_aperea
ENSAMXG00000013711	sept12	76	69.759	ENSCPOG00000011596	SEPT12	82	68.350	Cavia_porcellus
ENSAMXG00000013711	sept12	77	68.243	ENSCCAG00000021929	SEPT12	87	65.385	Cebus_capucinus
ENSAMXG00000013711	sept12	78	68.687	ENSCATG00000033120	SEPT12	87	66.026	Cercocebus_atys
ENSAMXG00000013711	sept12	76	70.103	ENSCLAG00000011397	SEPT12	80	70.103	Chinchilla_lanigera
ENSAMXG00000013711	sept12	78	48.232	ENSCSAG00000008975	SEPT12	83	49.196	Chlorocebus_sabaeus
ENSAMXG00000013711	sept12	50	70.000	ENSCHOG00000000698	-	52	70.000	Choloepus_hoffmanni
ENSAMXG00000013711	sept12	90	73.392	ENSCPBG00000026556	SEPT12	96	74.848	Chrysemys_picta_bellii
ENSAMXG00000013711	sept12	75	51.368	ENSCSAVG00000001804	-	100	51.368	Ciona_savignyi
ENSAMXG00000013711	sept12	78	67.677	ENSCANG00000035476	SEPT12	87	65.064	Colobus_angolensis_palliatus
ENSAMXG00000013711	sept12	67	60.741	ENSCGRG00001012476	Sept12	83	60.741	Cricetulus_griseus_chok1gshd
ENSAMXG00000013711	sept12	67	60.741	ENSCGRG00000015421	Sept12	83	60.741	Cricetulus_griseus_crigri
ENSAMXG00000013711	sept12	84	84.472	ENSCSEG00000011498	sept12	90	84.472	Cynoglossus_semilaevis
ENSAMXG00000013711	sept12	99	88.684	ENSDARG00000019191	sept12	93	94.242	Danio_rerio
ENSAMXG00000013711	sept12	77	69.257	ENSDORG00000011984	Sept12	88	66.932	Dipodomys_ordii
ENSAMXG00000013711	sept12	79	55.814	ENSETEG00000016201	SEPT12	87	55.128	Echinops_telfairi
ENSAMXG00000013711	sept12	80	65.033	ENSEBUG00000008442	sept12	58	65.461	Eptatretus_burgeri
ENSAMXG00000013711	sept12	78	57.383	ENSEASG00005000570	SEPT12	86	63.636	Equus_asinus_asinus
ENSAMXG00000013711	sept12	82	64.650	ENSECAG00000018692	SEPT12	81	64.650	Equus_caballus
ENSAMXG00000013711	sept12	81	65.696	ENSFCAG00000029843	SEPT12	88	64.263	Felis_catus
ENSAMXG00000013711	sept12	85	75.385	ENSFALG00000004482	SEPT12	87	75.385	Ficedula_albicollis
ENSAMXG00000013711	sept12	64	66.260	ENSFDAG00000016066	SEPT12	87	64.683	Fukomys_damarensis
ENSAMXG00000013711	sept12	98	77.778	ENSFHEG00000008995	sept12	82	86.280	Fundulus_heteroclitus
ENSAMXG00000013711	sept12	80	83.934	ENSGMOG00000009662	sept12	98	83.934	Gadus_morhua
ENSAMXG00000013711	sept12	73	89.286	ENSGALG00000029027	SEPT12	85	78.041	Gallus_gallus
ENSAMXG00000013711	sept12	89	85.061	ENSGAFG00000005527	sept12	87	88.255	Gambusia_affinis
ENSAMXG00000013711	sept12	85	84.308	ENSGACG00000000503	sept12	96	84.308	Gasterosteus_aculeatus
ENSAMXG00000013711	sept12	85	73.375	ENSGAGG00000016756	SEPT12	93	73.375	Gopherus_agassizii
ENSAMXG00000013711	sept12	82	65.176	ENSGGOG00000007528	SEPT12	87	64.744	Gorilla_gorilla
ENSAMXG00000013711	sept12	81	66.019	ENSHGLG00000014562	SEPT12	88	65.806	Heterocephalus_glaber_female
ENSAMXG00000013711	sept12	81	66.019	ENSHGLG00100000756	SEPT12	88	65.806	Heterocephalus_glaber_male
ENSAMXG00000013711	sept12	100	85.864	ENSIPUG00000015361	sept12	100	81.687	Ictalurus_punctatus
ENSAMXG00000013711	sept12	83	64.873	ENSSTOG00000012312	SEPT12	88	64.873	Ictidomys_tridecemlineatus
ENSAMXG00000013711	sept12	70	66.914	ENSJJAG00000024267	Sept12	87	66.914	Jaculus_jaculus
ENSAMXG00000013711	sept12	99	75.321	ENSKMAG00000006409	sept12	96	85.276	Kryptolebias_marmoratus
ENSAMXG00000013711	sept12	86	85.714	ENSLBEG00000004076	sept12	93	85.976	Labrus_bergylta
ENSAMXG00000013711	sept12	99	79.947	ENSLOCG00000006723	sept12	100	65.771	Lepisosteus_oculatus
ENSAMXG00000013711	sept12	87	60.778	ENSLAFG00000030360	SEPT12	86	63.961	Loxodonta_africana
ENSAMXG00000013711	sept12	78	68.687	ENSMFAG00000043961	SEPT12	87	66.026	Macaca_fascicularis
ENSAMXG00000013711	sept12	78	68.687	ENSMLEG00000019167	SEPT12	87	66.026	Mandrillus_leucophaeus
ENSAMXG00000013711	sept12	95	80.328	ENSMAMG00000003208	sept12	86	85.976	Mastacembelus_armatus
ENSAMXG00000013711	sept12	77	78.041	ENSMGAG00000009617	SEPT12	88	78.041	Meleagris_gallopavo
ENSAMXG00000013711	sept12	78	68.687	ENSMAUG00000013139	Sept12	87	66.026	Mesocricetus_auratus
ENSAMXG00000013711	sept12	84	62.733	ENSMICG00000015913	SEPT12	89	62.733	Microcebus_murinus
ENSAMXG00000013711	sept12	78	69.024	ENSMOCG00000017045	Sept12	87	66.346	Microtus_ochrogaster
ENSAMXG00000013711	sept12	80	66.990	ENSMODG00000006197	SEPT12	87	66.990	Monodelphis_domestica
ENSAMXG00000013711	sept12	95	80.055	ENSMALG00000003054	sept12	98	85.366	Monopterus_albus
ENSAMXG00000013711	sept12	66	67.063	MGP_CAROLIEiJ_G0020416	Sept12	79	67.063	Mus_caroli
ENSAMXG00000013711	sept12	81	67.208	ENSMUSG00000022542	Sept12	90	66.667	Mus_musculus
ENSAMXG00000013711	sept12	66	66.270	MGP_PahariEiJ_G0016124	Sept12	79	66.270	Mus_pahari
ENSAMXG00000013711	sept12	66	67.063	MGP_SPRETEiJ_G0021310	Sept12	79	67.063	Mus_spretus
ENSAMXG00000013711	sept12	81	66.774	ENSMPUG00000014915	SEPT12	86	66.774	Mustela_putorius_furo
ENSAMXG00000013711	sept12	83	61.514	ENSMLUG00000003525	SEPT12	90	61.514	Myotis_lucifugus
ENSAMXG00000013711	sept12	81	66.234	ENSNGAG00000021915	Sept12	87	65.385	Nannospalax_galili
ENSAMXG00000013711	sept12	84	60.185	ENSNLEG00000009906	SEPT12	93	61.728	Nomascus_leucogenys
ENSAMXG00000013711	sept12	58	63.514	ENSMEUG00000003153	SEPT12	90	62.780	Notamacropus_eugenii
ENSAMXG00000013711	sept12	80	66.346	ENSODEG00000013145	SEPT12	89	65.723	Octodon_degus
ENSAMXG00000013711	sept12	78	66.443	ENSOCUG00000008343	SEPT12	83	66.443	Oryctolagus_cuniculus
ENSAMXG00000013711	sept12	86	83.939	ENSORLG00000019251	-	97	83.939	Oryzias_latipes
ENSAMXG00000013711	sept12	87	83.036	ENSORLG00015007797	-	97	84.568	Oryzias_latipes_hsok
ENSAMXG00000013711	sept12	100	74.490	ENSOMEG00000002676	-	85	83.283	Oryzias_melastigma
ENSAMXG00000013711	sept12	78	68.121	ENSOGAG00000025966	SEPT12	87	65.705	Otolemur_garnettii
ENSAMXG00000013711	sept12	77	67.797	ENSOARG00000003930	SEPT12	86	66.230	Ovis_aries
ENSAMXG00000013711	sept12	78	68.350	ENSPPAG00000033910	SEPT12	87	65.705	Pan_paniscus
ENSAMXG00000013711	sept12	78	56.522	ENSPPRG00000006622	SEPT12	84	55.340	Panthera_pardus
ENSAMXG00000013711	sept12	81	65.696	ENSPTIG00000015526	SEPT12	85	65.696	Panthera_tigris_altaica
ENSAMXG00000013711	sept12	78	68.350	ENSPTRG00000007728	SEPT12	87	65.705	Pan_troglodytes
ENSAMXG00000013711	sept12	78	68.687	ENSPANG00000022807	SEPT12	87	66.026	Papio_anubis
ENSAMXG00000013711	sept12	97	74.394	ENSPKIG00000009934	-	90	85.714	Paramormyrops_kingsleyae
ENSAMXG00000013711	sept12	100	77.285	ENSPKIG00000019480	sept12	88	83.587	Paramormyrops_kingsleyae
ENSAMXG00000013711	sept12	82	61.783	ENSPSIG00000014795	SEPT12	84	65.085	Pelodiscus_sinensis
ENSAMXG00000013711	sept12	95	68.267	ENSPMGG00000019506	-	100	70.627	Periophthalmus_magnuspinnatus
ENSAMXG00000013711	sept12	80	66.990	ENSPCIG00000026671	SEPT12	87	66.990	Phascolarctos_cinereus
ENSAMXG00000013711	sept12	96	79.292	ENSPFOG00000015822	sept12	95	86.018	Poecilia_formosa
ENSAMXG00000013711	sept12	96	78.804	ENSPLAG00000004719	sept12	95	85.671	Poecilia_latipinna
ENSAMXG00000013711	sept12	96	79.076	ENSPMEG00000022516	sept12	95	85.671	Poecilia_mexicana
ENSAMXG00000013711	sept12	78	68.687	ENSPCOG00000014037	SEPT12	87	66.026	Propithecus_coquereli
ENSAMXG00000013711	sept12	81	66.558	ENSPVAG00000016080	SEPT12	86	64.087	Pteropus_vampyrus
ENSAMXG00000013711	sept12	100	96.335	ENSPNAG00000026381	sept12	100	96.335	Pygocentrus_nattereri
ENSAMXG00000013711	sept12	82	66.026	ENSRNOG00000003137	Sept12	87	66.026	Rattus_norvegicus
ENSAMXG00000013711	sept12	78	67.677	ENSRBIG00000024546	SEPT12	87	65.064	Rhinopithecus_bieti
ENSAMXG00000013711	sept12	78	67.340	ENSRROG00000028781	SEPT12	87	64.744	Rhinopithecus_roxellana
ENSAMXG00000013711	sept12	77	69.048	ENSSBOG00000036170	SEPT12	86	66.343	Saimiri_boliviensis_boliviensis
ENSAMXG00000013711	sept12	84	65.000	ENSSHAG00000007036	SEPT12	88	64.596	Sarcophilus_harrisii
ENSAMXG00000013711	sept12	99	74.074	ENSSFOG00015010148	-	91	82.911	Scleropages_formosus
ENSAMXG00000013711	sept12	100	79.581	ENSSFOG00015023684	sept12	91	87.500	Scleropages_formosus
ENSAMXG00000013711	sept12	87	84.731	ENSSMAG00000015399	sept12	85	85.890	Scophthalmus_maximus
ENSAMXG00000013711	sept12	99	87.195	ENSSDUG00000018368	sept12	91	87.195	Seriola_dumerili
ENSAMXG00000013711	sept12	79	77.409	ENSSPUG00000009703	SEPT12	94	73.926	Sphenodon_punctatus
ENSAMXG00000013711	sept12	77	73.154	ENSTGUG00000003705	SEPT12	100	72.667	Taeniopygia_guttata
ENSAMXG00000013711	sept12	95	77.384	ENSTRUG00000021364	sept12	85	82.263	Takifugu_rubripes
ENSAMXG00000013711	sept12	81	66.883	ENSTTRG00000005489	SEPT12	82	66.883	Tursiops_truncatus
ENSAMXG00000013711	sept12	78	57.576	ENSUMAG00000002994	SEPT12	87	67.785	Ursus_maritimus
ENSAMXG00000013711	sept12	53	62.871	ENSVPAG00000010635	-	76	62.871	Vicugna_pacos
ENSAMXG00000013711	sept12	78	69.697	ENSVVUG00000016536	SEPT12	83	69.697	Vulpes_vulpes
ENSAMXG00000013711	sept12	83	73.354	ENSXETG00000009151	sept12	90	76.174	Xenopus_tropicalis
ENSAMXG00000013711	sept12	93	79.330	ENSXCOG00000007643	sept12	92	85.106	Xiphophorus_couchianus
ENSAMXG00000013711	sept12	86	84.802	ENSXMAG00000012528	sept12	85	84.802	Xiphophorus_maculatus