EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000013750 (Gene tree)
Gene ID: 103034065
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8178 bases
Position: chr23:6555691-6563868
Accession: 103034065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014149	RRM_1	PF00076.22	7.9e-25	1	2
ENSAMXP00000014149	RRM_1	PF00076.22	7.9e-25	2	2
ENSAMXP00000039604	RRM_1	PF00076.22	7.9e-25	1	2
ENSAMXP00000039604	RRM_1	PF00076.22	7.9e-25	2	2
ENSAMXP00000040860	RRM_1	PF00076.22	7.9e-25	1	2
ENSAMXP00000040860	RRM_1	PF00076.22	7.9e-25	2	2
ENSAMXP00000048773	RRM_1	PF00076.22	7.9e-25	1	2
ENSAMXP00000048773	RRM_1	PF00076.22	7.9e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040575	-	1504	-	ENSAMXP00000039604	304 (aa)	-	UPI000BBD93CF
ENSAMXT00000014149	-	1145	XM_007253106	ENSAMXP00000014149	304 (aa)	XP_007253168	W5L2T7
ENSAMXT00000040360	-	1504	-	ENSAMXP00000048773	304 (aa)	-	UPI000BBD93CF
ENSAMXT00000057870	-	1504	-	ENSAMXP00000040860	304 (aa)	-	UPI000BBD93CF

Gene Model

Click here to download ENSAMXG00000013750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000013750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000013750	trnau1apa	61	30.435	ENSAMXG00000008599	pabpc1b	54	30.435
ENSAMXG00000013750	trnau1apa	95	44.551	ENSAMXG00000001805	trnau1apb	98	45.918
ENSAMXG00000013750	trnau1apa	88	68.132	ENSAMXG00000029240	-	94	68.132

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000013750	trnau1apa	90	57.762	ENSG00000180098	TRNAU1AP	95	57.762	Homo_sapiens
ENSAMXG00000013750	trnau1apa	97	53.871	ENSAPOG00000007148	TRNAU1AP	99	54.194	Acanthochromis_polyacanthus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSAMEG00000011367	TRNAU1AP	95	57.762	Ailuropoda_melanoleuca
ENSAMXG00000013750	trnau1apa	88	71.429	ENSACIG00000004161	trnau1apa	93	71.429	Amphilophus_citrinellus
ENSAMXG00000013750	trnau1apa	97	53.896	ENSAOCG00000008056	trnau1apa	99	54.870	Amphiprion_ocellaris
ENSAMXG00000013750	trnau1apa	97	53.896	ENSAPEG00000008868	trnau1apa	99	54.870	Amphiprion_percula
ENSAMXG00000013750	trnau1apa	97	52.960	ENSATEG00000012140	trnau1apa	99	52.960	Anabas_testudineus
ENSAMXG00000013750	trnau1apa	89	56.727	ENSAPLG00000002606	TRNAU1AP	99	57.914	Anas_platyrhynchos
ENSAMXG00000013750	trnau1apa	70	33.184	ENSACAG00000004205	-	79	35.681	Anolis_carolinensis
ENSAMXG00000013750	trnau1apa	90	44.803	ENSACAG00000003995	-	96	46.392	Anolis_carolinensis
ENSAMXG00000013750	trnau1apa	90	57.762	ENSANAG00000018976	TRNAU1AP	95	57.762	Aotus_nancymaae
ENSAMXG00000013750	trnau1apa	97	55.049	ENSACLG00000018515	trnau1apa	99	56.026	Astatotilapia_calliptera
ENSAMXG00000013750	trnau1apa	90	57.401	ENSBTAG00000010393	TRNAU1AP	95	57.401	Bos_taurus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSCJAG00000009717	TRNAU1AP	83	72.857	Callithrix_jacchus
ENSAMXG00000013750	trnau1apa	91	57.500	ENSCAFG00000011735	TRNAU1AP	96	57.500	Canis_familiaris
ENSAMXG00000013750	trnau1apa	91	57.500	ENSCAFG00020023584	TRNAU1AP	96	57.500	Canis_lupus_dingo
ENSAMXG00000013750	trnau1apa	90	57.401	ENSCHIG00000023215	TRNAU1AP	95	57.401	Capra_hircus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSTSYG00000003506	TRNAU1AP	83	72.857	Carlito_syrichta
ENSAMXG00000013750	trnau1apa	91	57.500	ENSCPOG00000001925	TRNAU1AP	96	57.500	Cavia_porcellus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSCCAG00000037506	TRNAU1AP	83	72.857	Cebus_capucinus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSCATG00000044617	TRNAU1AP	83	72.857	Cercocebus_atys
ENSAMXG00000013750	trnau1apa	94	56.401	ENSCLAG00000008223	TRNAU1AP	99	56.401	Chinchilla_lanigera
ENSAMXG00000013750	trnau1apa	90	57.762	ENSCSAG00000001014	TRNAU1AP	95	57.762	Chlorocebus_sabaeus
ENSAMXG00000013750	trnau1apa	87	56.929	ENSCPBG00000000121	TRNAU1AP	96	56.929	Chrysemys_picta_bellii
ENSAMXG00000013750	trnau1apa	54	47.273	ENSCSAVG00000011781	-	95	45.556	Ciona_savignyi
ENSAMXG00000013750	trnau1apa	90	48.375	ENSCANG00000041949	TRNAU1AP	94	48.375	Colobus_angolensis_palliatus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSCGRG00001004713	Trnau1ap	95	57.762	Cricetulus_griseus_chok1gshd
ENSAMXG00000013750	trnau1apa	90	57.762	ENSCGRG00000014532	Trnau1ap	95	57.762	Cricetulus_griseus_crigri
ENSAMXG00000013750	trnau1apa	97	54.369	ENSCSEG00000006663	trnau1apa	99	54.516	Cynoglossus_semilaevis
ENSAMXG00000013750	trnau1apa	97	51.613	ENSCVAG00000018069	trnau1apa	99	53.968	Cyprinodon_variegatus
ENSAMXG00000013750	trnau1apa	99	61.311	ENSDARG00000101323	trnau1apa	96	61.311	Danio_rerio
ENSAMXG00000013750	trnau1apa	94	56.055	ENSDNOG00000033009	TRNAU1AP	99	56.055	Dasypus_novemcinctus
ENSAMXG00000013750	trnau1apa	57	57.471	ENSDNOG00000047959	-	90	57.471	Dasypus_novemcinctus
ENSAMXG00000013750	trnau1apa	90	54.015	ENSDORG00000006349	Trnau1ap	92	59.633	Dipodomys_ordii
ENSAMXG00000013750	trnau1apa	71	40.826	FBgn0031607	CG15440	63	40.826	Drosophila_melanogaster
ENSAMXG00000013750	trnau1apa	77	53.586	ENSETEG00000012594	TRNAU1AP	95	53.586	Echinops_telfairi
ENSAMXG00000013750	trnau1apa	90	57.762	ENSEASG00005010062	TRNAU1AP	86	72.857	Equus_asinus_asinus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSECAG00000012980	TRNAU1AP	86	72.857	Equus_caballus
ENSAMXG00000013750	trnau1apa	97	54.341	ENSELUG00000017686	trnau1apa	99	56.311	Esox_lucius
ENSAMXG00000013750	trnau1apa	91	72.917	ENSELUG00000022790	-	96	60.504	Esox_lucius
ENSAMXG00000013750	trnau1apa	90	57.762	ENSFCAG00000013401	TRNAU1AP	95	57.762	Felis_catus
ENSAMXG00000013750	trnau1apa	87	57.303	ENSFALG00000001371	TRNAU1AP	96	58.148	Ficedula_albicollis
ENSAMXG00000013750	trnau1apa	91	57.500	ENSFDAG00000018599	TRNAU1AP	96	57.500	Fukomys_damarensis
ENSAMXG00000013750	trnau1apa	71	59.111	ENSFHEG00000018232	trnau1apa	85	55.642	Fundulus_heteroclitus
ENSAMXG00000013750	trnau1apa	97	48.052	ENSGMOG00000016508	trnau1apa	99	49.838	Gadus_morhua
ENSAMXG00000013750	trnau1apa	67	34.335	ENSGALG00000012721	C2H6orf52	84	36.017	Gallus_gallus
ENSAMXG00000013750	trnau1apa	90	56.318	ENSGALG00000001310	-	95	56.584	Gallus_gallus
ENSAMXG00000013750	trnau1apa	59	67.039	ENSGAFG00000004928	trnau1apa	82	60.000	Gambusia_affinis
ENSAMXG00000013750	trnau1apa	97	53.526	ENSGACG00000001443	trnau1apa	99	54.369	Gasterosteus_aculeatus
ENSAMXG00000013750	trnau1apa	87	56.929	ENSGAGG00000004940	TRNAU1AP	96	57.407	Gopherus_agassizii
ENSAMXG00000013750	trnau1apa	90	57.762	ENSGGOG00000003511	TRNAU1AP	83	72.857	Gorilla_gorilla
ENSAMXG00000013750	trnau1apa	97	53.698	ENSHBUG00000002510	trnau1apa	99	54.662	Haplochromis_burtoni
ENSAMXG00000013750	trnau1apa	94	56.401	ENSHGLG00000010380	TRNAU1AP	99	56.401	Heterocephalus_glaber_female
ENSAMXG00000013750	trnau1apa	94	55.017	ENSHGLG00100012699	TRNAU1AP	99	55.017	Heterocephalus_glaber_male
ENSAMXG00000013750	trnau1apa	97	51.899	ENSHCOG00000014770	trnau1apa	99	51.899	Hippocampus_comes
ENSAMXG00000013750	trnau1apa	90	57.762	ENSSTOG00000000079	TRNAU1AP	95	57.762	Ictidomys_tridecemlineatus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSJJAG00000010128	Trnau1ap	95	57.762	Jaculus_jaculus
ENSAMXG00000013750	trnau1apa	97	55.128	ENSKMAG00000001230	trnau1apa	99	55.128	Kryptolebias_marmoratus
ENSAMXG00000013750	trnau1apa	97	52.866	ENSLBEG00000011683	trnau1apa	99	53.822	Labrus_bergylta
ENSAMXG00000013750	trnau1apa	92	47.518	ENSLACG00000005541	TRNAU1AP	97	49.474	Latimeria_chalumnae
ENSAMXG00000013750	trnau1apa	92	56.643	ENSLOCG00000004041	trnau1apa	97	56.643	Lepisosteus_oculatus
ENSAMXG00000013750	trnau1apa	90	58.123	ENSLAFG00000007628	TRNAU1AP	95	58.123	Loxodonta_africana
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMFAG00000043751	TRNAU1AP	83	72.857	Macaca_fascicularis
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMMUG00000006561	TRNAU1AP	95	57.762	Macaca_mulatta
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMNEG00000044201	TRNAU1AP	83	72.857	Macaca_nemestrina
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMLEG00000015649	TRNAU1AP	83	72.857	Mandrillus_leucophaeus
ENSAMXG00000013750	trnau1apa	97	52.824	ENSMAMG00000001247	trnau1apa	100	52.812	Mastacembelus_armatus
ENSAMXG00000013750	trnau1apa	97	55.049	ENSMZEG00005017722	trnau1apa	99	56.026	Maylandia_zebra
ENSAMXG00000013750	trnau1apa	88	55.720	ENSMGAG00000002105	TRNAU1AP	96	55.720	Meleagris_gallopavo
ENSAMXG00000013750	trnau1apa	94	56.055	ENSMICG00000008386	TRNAU1AP	83	72.857	Microcebus_murinus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMOCG00000011189	Trnau1ap	95	57.762	Microtus_ochrogaster
ENSAMXG00000013750	trnau1apa	97	48.366	ENSMMOG00000012107	trnau1apa	99	49.020	Mola_mola
ENSAMXG00000013750	trnau1apa	90	58.484	ENSMODG00000010927	TRNAU1AP	95	58.484	Monodelphis_domestica
ENSAMXG00000013750	trnau1apa	91	55.593	ENSMALG00000016778	trnau1apa	94	56.271	Monopterus_albus
ENSAMXG00000013750	trnau1apa	90	57.762	MGP_CAROLIEiJ_G0026563	Trnau1ap	81	72.857	Mus_caroli
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMUSG00000028898	Trnau1ap	81	72.857	Mus_musculus
ENSAMXG00000013750	trnau1apa	90	57.762	MGP_PahariEiJ_G0028896	Trnau1ap	86	71.667	Mus_pahari
ENSAMXG00000013750	trnau1apa	94	56.055	MGP_SPRETEiJ_G0027544	Trnau1ap	99	56.055	Mus_spretus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSMPUG00000015511	TRNAU1AP	95	57.762	Mustela_putorius_furo
ENSAMXG00000013750	trnau1apa	94	56.055	ENSMLUG00000012586	TRNAU1AP	99	56.055	Myotis_lucifugus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSNGAG00000015881	Trnau1ap	95	57.762	Nannospalax_galili
ENSAMXG00000013750	trnau1apa	97	47.826	ENSNBRG00000001758	trnau1apa	99	49.026	Neolamprologus_brichardi
ENSAMXG00000013750	trnau1apa	90	57.762	ENSNLEG00000009822	TRNAU1AP	83	72.857	Nomascus_leucogenys
ENSAMXG00000013750	trnau1apa	88	57.196	ENSMEUG00000006117	TRNAU1AP	100	55.477	Notamacropus_eugenii
ENSAMXG00000013750	trnau1apa	55	65.169	ENSOPRG00000007084	-	63	65.169	Ochotona_princeps
ENSAMXG00000013750	trnau1apa	94	56.401	ENSODEG00000002970	TRNAU1AP	99	56.401	Octodon_degus
ENSAMXG00000013750	trnau1apa	58	65.537	ENSONIG00000004715	trnau1apa	82	58.654	Oreochromis_niloticus
ENSAMXG00000013750	trnau1apa	91	45.714	ENSOANG00000005325	-	96	46.290	Ornithorhynchus_anatinus
ENSAMXG00000013750	trnau1apa	90	56.318	ENSOCUG00000011704	-	95	56.318	Oryctolagus_cuniculus
ENSAMXG00000013750	trnau1apa	90	51.971	ENSOCUG00000002353	-	95	51.971	Oryctolagus_cuniculus
ENSAMXG00000013750	trnau1apa	82	46.094	ENSOCUG00000006834	-	97	46.094	Oryctolagus_cuniculus
ENSAMXG00000013750	trnau1apa	97	55.195	ENSORLG00000010428	trnau1apa	99	55.195	Oryzias_latipes
ENSAMXG00000013750	trnau1apa	97	55.195	ENSORLG00020000926	trnau1ap	99	55.195	Oryzias_latipes_hni
ENSAMXG00000013750	trnau1apa	97	55.195	ENSORLG00015009858	trnau1ap	99	55.195	Oryzias_latipes_hsok
ENSAMXG00000013750	trnau1apa	97	55.484	ENSOMEG00000007873	trnau1apa	99	55.484	Oryzias_melastigma
ENSAMXG00000013750	trnau1apa	90	57.762	ENSOGAG00000002274	TRNAU1AP	95	57.762	Otolemur_garnettii
ENSAMXG00000013750	trnau1apa	90	57.401	ENSOARG00000002843	TRNAU1AP	95	57.401	Ovis_aries
ENSAMXG00000013750	trnau1apa	90	57.762	ENSPPAG00000033927	TRNAU1AP	83	72.857	Pan_paniscus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSPPRG00000004416	TRNAU1AP	95	57.762	Panthera_pardus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSPTIG00000016677	TRNAU1AP	95	57.762	Panthera_tigris_altaica
ENSAMXG00000013750	trnau1apa	83	53.360	ENSPTRG00000000434	-	90	53.755	Pan_troglodytes
ENSAMXG00000013750	trnau1apa	90	57.762	ENSPANG00000016019	TRNAU1AP	83	72.857	Papio_anubis
ENSAMXG00000013750	trnau1apa	90	56.690	ENSPKIG00000015511	trnau1apa	93	56.690	Paramormyrops_kingsleyae
ENSAMXG00000013750	trnau1apa	88	73.626	ENSPKIG00000022205	-	93	73.626	Paramormyrops_kingsleyae
ENSAMXG00000013750	trnau1apa	87	55.926	ENSPSIG00000006864	TRNAU1AP	96	57.778	Pelodiscus_sinensis
ENSAMXG00000013750	trnau1apa	94	50.853	ENSPMGG00000023893	trnau1apa	96	50.853	Periophthalmus_magnuspinnatus
ENSAMXG00000013750	trnau1apa	90	57.401	ENSPEMG00000007877	Trnau1ap	95	57.401	Peromyscus_maniculatus_bairdii
ENSAMXG00000013750	trnau1apa	57	55.367	ENSPMAG00000000592	trnau1apa	97	55.367	Petromyzon_marinus
ENSAMXG00000013750	trnau1apa	70	48.837	ENSPMAG00000005934	trnau1apa	93	48.837	Petromyzon_marinus
ENSAMXG00000013750	trnau1apa	97	52.244	ENSPFOG00000008100	trnau1apa	99	51.768	Poecilia_formosa
ENSAMXG00000013750	trnau1apa	93	52.000	ENSPLAG00000010236	trnau1apa	99	51.505	Poecilia_latipinna
ENSAMXG00000013750	trnau1apa	97	50.804	ENSPMEG00000016387	trnau1apa	97	50.323	Poecilia_mexicana
ENSAMXG00000013750	trnau1apa	94	50.174	ENSPREG00000019821	trnau1apa	93	63.441	Poecilia_reticulata
ENSAMXG00000013750	trnau1apa	81	48.819	ENSPPYG00000001639	-	95	48.819	Pongo_abelii
ENSAMXG00000013750	trnau1apa	94	56.055	ENSPCOG00000027712	-	99	56.055	Propithecus_coquereli
ENSAMXG00000013750	trnau1apa	63	67.424	ENSPCOG00000023470	-	100	46.367	Propithecus_coquereli
ENSAMXG00000013750	trnau1apa	90	57.762	ENSPVAG00000017214	TRNAU1AP	95	57.762	Pteropus_vampyrus
ENSAMXG00000013750	trnau1apa	97	54.167	ENSPNYG00000010130	trnau1apa	99	55.814	Pundamilia_nyererei
ENSAMXG00000013750	trnau1apa	100	72.727	ENSPNAG00000024905	trnau1apa	100	72.727	Pygocentrus_nattereri
ENSAMXG00000013750	trnau1apa	79	56.967	ENSRNOG00000055344	Trnau1ap	82	56.967	Rattus_norvegicus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSRBIG00000029083	TRNAU1AP	83	72.857	Rhinopithecus_bieti
ENSAMXG00000013750	trnau1apa	90	57.762	ENSRROG00000029128	TRNAU1AP	83	72.857	Rhinopithecus_roxellana
ENSAMXG00000013750	trnau1apa	90	57.762	ENSSBOG00000021299	TRNAU1AP	83	72.857	Saimiri_boliviensis_boliviensis
ENSAMXG00000013750	trnau1apa	90	58.123	ENSSHAG00000008108	TRNAU1AP	95	58.123	Sarcophilus_harrisii
ENSAMXG00000013750	trnau1apa	97	51.724	ENSSMAG00000020851	trnau1apa	99	52.366	Scophthalmus_maximus
ENSAMXG00000013750	trnau1apa	97	51.875	ENSSDUG00000011734	trnau1apa	99	52.174	Seriola_dumerili
ENSAMXG00000013750	trnau1apa	97	45.151	ENSSLDG00000012101	trnau1apa	99	45.333	Seriola_lalandi_dorsalis
ENSAMXG00000013750	trnau1apa	88	57.196	ENSSARG00000007536	TRNAU1AP	96	57.196	Sorex_araneus
ENSAMXG00000013750	trnau1apa	94	50.519	ENSSPUG00000010400	-	98	52.397	Sphenodon_punctatus
ENSAMXG00000013750	trnau1apa	59	44.022	ENSSPUG00000010415	-	98	44.022	Sphenodon_punctatus
ENSAMXG00000013750	trnau1apa	97	54.487	ENSSPAG00000005029	trnau1apa	99	55.128	Stegastes_partitus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSSSCG00000030284	TRNAU1AP	95	57.762	Sus_scrofa
ENSAMXG00000013750	trnau1apa	62	38.889	ENSTGUG00000005908	-	95	42.328	Taeniopygia_guttata
ENSAMXG00000013750	trnau1apa	88	56.827	ENSTGUG00000000735	-	96	57.299	Taeniopygia_guttata
ENSAMXG00000013750	trnau1apa	97	53.226	ENSTRUG00000003352	trnau1apa	99	53.226	Takifugu_rubripes
ENSAMXG00000013750	trnau1apa	97	51.447	ENSTNIG00000006129	trnau1apa	99	51.768	Tetraodon_nigroviridis
ENSAMXG00000013750	trnau1apa	77	49.789	ENSTBEG00000008049	-	95	49.789	Tupaia_belangeri
ENSAMXG00000013750	trnau1apa	94	56.055	ENSTTRG00000001854	TRNAU1AP	99	56.055	Tursiops_truncatus
ENSAMXG00000013750	trnau1apa	87	57.678	ENSUAMG00000008789	TRNAU1AP	96	57.678	Ursus_americanus
ENSAMXG00000013750	trnau1apa	90	57.762	ENSUMAG00000011068	TRNAU1AP	95	57.762	Ursus_maritimus
ENSAMXG00000013750	trnau1apa	77	56.540	ENSVPAG00000006778	TRNAU1AP	80	56.540	Vicugna_pacos
ENSAMXG00000013750	trnau1apa	91	56.071	ENSVVUG00000012518	TRNAU1AP	90	56.071	Vulpes_vulpes
ENSAMXG00000013750	trnau1apa	97	52.564	ENSXMAG00000017361	trnau1apa	99	52.090	Xiphophorus_maculatus