EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000013954 (Gene tree)
Gene ID: 103024437
Gene Symbol: -
Alias: -
Full Name: BCLAF1 and THRAP3 family member 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12378 bases
Position: chr3:21648293-21660670
Accession: 103024437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014360	THRAP3_BCLAF1	PF15440.6	4.3e-22	1	1
ENSAMXP00000039941	THRAP3_BCLAF1	PF15440.6	1.5e-17	1	1
ENSAMXP00000042298	THRAP3_BCLAF1	PF15440.6	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000014360	-	2926	-	ENSAMXP00000014360	433 (aa)	-	W5L3E8
ENSAMXT00000041160	-	3838	XM_007248963	ENSAMXP00000039941	737 (aa)	XP_007249025	UPI000BBD8E43
ENSAMXT00000051193	-	615	-	ENSAMXP00000042298	204 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000013954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000013954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000013954	-	58	44.610	ENSAPOG00000005256	-	57	45.113	Acanthochromis_polyacanthus
ENSAMXG00000013954	-	53	61.062	ENSACIG00000009107	zgc:112982	73	59.091	Amphilophus_citrinellus
ENSAMXG00000013954	-	58	45.318	ENSAOCG00000015540	-	57	45.833	Amphiprion_ocellaris
ENSAMXG00000013954	-	58	45.318	ENSAPEG00000005388	-	64	43.046	Amphiprion_percula
ENSAMXG00000013954	-	98	54.622	ENSDARG00000001829	zgc:112982	77	56.140	Danio_rerio
ENSAMXG00000013954	-	100	59.592	ENSIPUG00000013837	-	94	61.261	Ictalurus_punctatus
ENSAMXG00000013954	-	59	50.000	ENSLBEG00000017147	-	73	55.102	Labrus_bergylta
ENSAMXG00000013954	-	61	48.000	ENSMZEG00005020613	-	75	52.660	Maylandia_zebra
ENSAMXG00000013954	-	53	57.407	ENSMMOG00000013104	zgc:112982	68	58.182	Mola_mola
ENSAMXG00000013954	-	52	56.757	ENSMALG00000017681	-	74	52.381	Monopterus_albus
ENSAMXG00000013954	-	54	49.219	ENSOMEG00000006057	-	67	54.819	Oryzias_melastigma
ENSAMXG00000013954	-	61	48.000	ENSPNYG00000024269	zgc:112982	73	52.910	Pundamilia_nyererei
ENSAMXG00000013954	-	98	56.306	ENSPNAG00000021161	zgc:112982	95	64.908	Pygocentrus_nattereri
ENSAMXG00000013954	-	62	40.719	ENSSMAG00000009714	-	78	46.429	Scophthalmus_maximus
ENSAMXG00000013954	-	63	43.151	ENSSPAG00000017763	-	60	42.759	Stegastes_partitus
ENSAMXG00000013954	-	59	53.226	ENSXMAG00000010229	-	52	53.226	Xiphophorus_maculatus