EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014086 (Gene tree)
Gene ID: 103027222
Gene Symbol: lyn
Alias: zgc:92124
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 34463 bases
Position: chr17:19452790-19487252
Accession: 103027222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040557	Methyltransf_15	PF09445.10	1.6e-42	1	1
ENSAMXP00000014489	Methyltransf_15	PF09445.10	1.8e-42	1	1
ENSAMXP00000043451	Methyltransf_15	PF09445.10	1.8e-42	1	1
ENSAMXP00000042855	Methyltransf_15	PF09445.10	2.7e-42	1	1
ENSAMXP00000042855	UPF0020	PF01170.18	2.4e-06	1	1
ENSAMXP00000040557	UPF0020	PF01170.18	2.4e-06	1	1
ENSAMXP00000014489	UPF0020	PF01170.18	2.7e-06	1	1
ENSAMXP00000043451	UPF0020	PF01170.18	3e-06	1	1
ENSAMXP00000042855	Met_10	PF02475.16	9.6e-07	1	1
ENSAMXP00000040557	Met_10	PF02475.16	1.1e-06	1	1
ENSAMXP00000043451	Met_10	PF02475.16	1.2e-06	1	1
ENSAMXP00000014489	Met_10	PF02475.16	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000044372	-	2684	XM_007232111	ENSAMXP00000040557	812 (aa)	XP_007232173	-
ENSAMXT00000032269	-	2839	-	ENSAMXP00000043451	871 (aa)	-	-
ENSAMXT00000014489	-	2825	-	ENSAMXP00000014489	859 (aa)	-	W5L3S7
ENSAMXT00000048196	-	2322	-	ENSAMXP00000042855	773 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000014086's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014086	lyn	98	38.691	ENSG00000137574	TGS1	98	39.150	Homo_sapiens
ENSAMXG00000014086	lyn	68	41.451	ENSAPOG00000004321	-	99	41.156	Acanthochromis_polyacanthus
ENSAMXG00000014086	lyn	98	38.780	ENSAMEG00000001781	TGS1	98	39.236	Ailuropoda_melanoleuca
ENSAMXG00000014086	lyn	100	42.207	ENSAOCG00000022799	lyn	99	43.192	Amphiprion_ocellaris
ENSAMXG00000014086	lyn	81	43.601	ENSAPEG00000019723	TGS1	97	44.877	Amphiprion_percula
ENSAMXG00000014086	lyn	86	54.902	ENSATEG00000005927	lyn	93	42.365	Anabas_testudineus
ENSAMXG00000014086	lyn	76	39.730	ENSAPLG00000006073	-	94	41.265	Anas_platyrhynchos
ENSAMXG00000014086	lyn	97	38.318	ENSACAG00000017988	TGS1	89	38.084	Anolis_carolinensis
ENSAMXG00000014086	lyn	98	39.951	ENSANAG00000035525	TGS1	98	39.538	Aotus_nancymaae
ENSAMXG00000014086	lyn	91	54.167	ENSACLG00000000261	lyn	98	44.095	Astatotilapia_calliptera
ENSAMXG00000014086	lyn	98	37.935	ENSBTAG00000005898	TGS1	98	38.269	Bos_taurus
ENSAMXG00000014086	lyn	98	39.954	ENSCJAG00000016657	TGS1	97	39.745	Callithrix_jacchus
ENSAMXG00000014086	lyn	98	39.175	ENSCAFG00000007011	TGS1	98	39.086	Canis_familiaris
ENSAMXG00000014086	lyn	98	38.188	ENSCAFG00020015485	TGS1	98	38.101	Canis_lupus_dingo
ENSAMXG00000014086	lyn	98	37.891	ENSCHIG00000013976	TGS1	98	39.348	Capra_hircus
ENSAMXG00000014086	lyn	96	40.069	ENSTSYG00000000171	TGS1	96	39.745	Carlito_syrichta
ENSAMXG00000014086	lyn	80	42.527	ENSCAPG00000013732	TGS1	93	39.034	Cavia_aperea
ENSAMXG00000014086	lyn	98	39.236	ENSCPOG00000009713	TGS1	98	39.005	Cavia_porcellus
ENSAMXG00000014086	lyn	98	40.023	ENSCCAG00000030476	TGS1	97	39.794	Cebus_capucinus
ENSAMXG00000014086	lyn	98	39.559	ENSCATG00000035375	TGS1	98	39.907	Cercocebus_atys
ENSAMXG00000014086	lyn	98	39.331	ENSCLAG00000009468	TGS1	98	39.095	Chinchilla_lanigera
ENSAMXG00000014086	lyn	92	36.173	ENSCSAG00000014611	TGS1	99	36.330	Chlorocebus_sabaeus
ENSAMXG00000014086	lyn	99	36.111	ENSCHOG00000001462	TGS1	99	36.607	Choloepus_hoffmanni
ENSAMXG00000014086	lyn	97	38.202	ENSCPBG00000004958	TGS1	97	37.528	Chrysemys_picta_bellii
ENSAMXG00000014086	lyn	98	39.327	ENSCANG00000041389	TGS1	98	39.211	Colobus_angolensis_palliatus
ENSAMXG00000014086	lyn	98	38.550	ENSCGRG00001019470	Tgs1	98	37.919	Cricetulus_griseus_chok1gshd
ENSAMXG00000014086	lyn	97	38.242	ENSCGRG00000008981	Tgs1	98	38.000	Cricetulus_griseus_crigri
ENSAMXG00000014086	lyn	99	54.337	ENSDARG00000107511	lyn	99	85.000	Danio_rerio
ENSAMXG00000014086	lyn	98	39.817	ENSDNOG00000008353	TGS1	98	39.265	Dasypus_novemcinctus
ENSAMXG00000014086	lyn	98	39.059	ENSDORG00000012484	Tgs1	98	38.489	Dipodomys_ordii
ENSAMXG00000014086	lyn	60	44.750	ENSETEG00000005126	TGS1	71	37.073	Echinops_telfairi
ENSAMXG00000014086	lyn	92	35.808	ENSEASG00005016371	TGS1	94	36.386	Equus_asinus_asinus
ENSAMXG00000014086	lyn	98	39.075	ENSECAG00000019399	TGS1	98	39.401	Equus_caballus
ENSAMXG00000014086	lyn	67	81.250	ENSEEUG00000001735	TGS1	68	81.250	Erinaceus_europaeus
ENSAMXG00000014086	lyn	99	49.400	ENSELUG00000012537	lyn	99	49.106	Esox_lucius
ENSAMXG00000014086	lyn	98	37.629	ENSFCAG00000011478	TGS1	98	37.791	Felis_catus
ENSAMXG00000014086	lyn	89	41.233	ENSFALG00000010249	TGS1	99	42.680	Ficedula_albicollis
ENSAMXG00000014086	lyn	98	39.135	ENSFDAG00000011405	TGS1	98	39.245	Fukomys_damarensis
ENSAMXG00000014086	lyn	99	39.102	ENSGALG00000015340	TGS1	99	39.394	Gallus_gallus
ENSAMXG00000014086	lyn	97	38.680	ENSGAGG00000019590	TGS1	97	38.908	Gopherus_agassizii
ENSAMXG00000014086	lyn	98	38.392	ENSGGOG00000008624	TGS1	98	39.474	Gorilla_gorilla
ENSAMXG00000014086	lyn	71	43.276	ENSHBUG00000003518	lyn	100	42.301	Haplochromis_burtoni
ENSAMXG00000014086	lyn	69	80.392	ENSHGLG00000000284	TGS1	87	80.392	Heterocephalus_glaber_female
ENSAMXG00000014086	lyn	99	46.053	ENSHCOG00000014161	lyn	100	45.305	Hippocampus_comes
ENSAMXG00000014086	lyn	83	67.925	ENSIPUG00000002294	tgs1	100	55.165	Ictalurus_punctatus
ENSAMXG00000014086	lyn	98	38.618	ENSSTOG00000009597	TGS1	98	39.200	Ictidomys_tridecemlineatus
ENSAMXG00000014086	lyn	98	38.825	ENSJJAG00000016239	Tgs1	99	39.115	Jaculus_jaculus
ENSAMXG00000014086	lyn	100	46.173	ENSLBEG00000027341	-	99	46.420	Labrus_bergylta
ENSAMXG00000014086	lyn	98	39.227	ENSLACG00000008074	TGS1	99	39.185	Latimeria_chalumnae
ENSAMXG00000014086	lyn	98	43.843	ENSLOCG00000005492	lyn	95	47.423	Lepisosteus_oculatus
ENSAMXG00000014086	lyn	98	39.480	ENSLAFG00000015386	TGS1	98	39.322	Loxodonta_africana
ENSAMXG00000014086	lyn	98	39.257	ENSMFAG00000029838	TGS1	98	39.261	Macaca_fascicularis
ENSAMXG00000014086	lyn	98	38.515	ENSMMUG00000005478	TGS1	98	38.657	Macaca_mulatta
ENSAMXG00000014086	lyn	98	39.257	ENSMNEG00000023719	TGS1	98	39.397	Macaca_nemestrina
ENSAMXG00000014086	lyn	98	39.559	ENSMLEG00000034807	TGS1	98	40.139	Mandrillus_leucophaeus
ENSAMXG00000014086	lyn	91	55.319	ENSMAMG00000009542	TGS1	100	43.473	Mastacembelus_armatus
ENSAMXG00000014086	lyn	91	54.167	ENSMZEG00005015681	lyn	98	44.095	Maylandia_zebra
ENSAMXG00000014086	lyn	80	41.193	ENSMGAG00000010966	TGS1	89	43.123	Meleagris_gallopavo
ENSAMXG00000014086	lyn	98	39.033	ENSMAUG00000009875	Tgs1	98	39.227	Mesocricetus_auratus
ENSAMXG00000014086	lyn	98	38.799	ENSMICG00000011199	TGS1	98	39.145	Microcebus_murinus
ENSAMXG00000014086	lyn	98	37.762	ENSMOCG00000019560	Tgs1	98	38.239	Microtus_ochrogaster
ENSAMXG00000014086	lyn	72	75.225	ENSMMOG00000021495	lyn	91	75.225	Mola_mola
ENSAMXG00000014086	lyn	85	43.333	ENSMODG00000009174	TGS1	94	42.056	Monodelphis_domestica
ENSAMXG00000014086	lyn	76	70.130	ENSMALG00000021440	lyn	100	45.646	Monopterus_albus
ENSAMXG00000014086	lyn	97	39.977	MGP_CAROLIEiJ_G0025779	-	97	39.298	Mus_caroli
ENSAMXG00000014086	lyn	98	35.903	MGP_CAROLIEiJ_G0025780	-	96	35.376	Mus_caroli
ENSAMXG00000014086	lyn	97	39.529	ENSMUSG00000028233	Tgs1	97	38.993	Mus_musculus
ENSAMXG00000014086	lyn	97	39.529	MGP_PahariEiJ_G0023901	-	96	38.863	Mus_pahari
ENSAMXG00000014086	lyn	97	35.897	MGP_PahariEiJ_G0023902	-	96	34.937	Mus_pahari
ENSAMXG00000014086	lyn	97	39.218	MGP_SPRETEiJ_G0026727	-	97	38.679	Mus_spretus
ENSAMXG00000014086	lyn	92	35.223	ENSMPUG00000010475	TGS1	99	34.686	Mustela_putorius_furo
ENSAMXG00000014086	lyn	98	39.120	ENSMLUG00000014857	TGS1	98	38.889	Myotis_lucifugus
ENSAMXG00000014086	lyn	97	39.061	ENSNGAG00000019532	Tgs1	96	39.529	Nannospalax_galili
ENSAMXG00000014086	lyn	98	40.206	ENSNLEG00000001101	TGS1	98	39.840	Nomascus_leucogenys
ENSAMXG00000014086	lyn	93	37.397	ENSMEUG00000001697	TGS1	95	38.742	Notamacropus_eugenii
ENSAMXG00000014086	lyn	91	35.216	ENSODEG00000002948	TGS1	79	39.750	Octodon_degus
ENSAMXG00000014086	lyn	88	40.365	ENSONIG00000006339	lyn	99	41.892	Oreochromis_niloticus
ENSAMXG00000014086	lyn	83	41.457	ENSOANG00000021853	TGS1	98	39.780	Ornithorhynchus_anatinus
ENSAMXG00000014086	lyn	98	37.801	ENSOCUG00000017522	TGS1	98	38.101	Oryctolagus_cuniculus
ENSAMXG00000014086	lyn	97	45.000	ENSORLG00000004299	lyn	93	45.839	Oryzias_latipes
ENSAMXG00000014086	lyn	97	43.836	ENSORLG00020004200	lyn	93	44.913	Oryzias_latipes_hni
ENSAMXG00000014086	lyn	89	46.399	ENSORLG00015007251	lyn	95	46.750	Oryzias_latipes_hsok
ENSAMXG00000014086	lyn	97	46.252	ENSOMEG00000020174	lyn	96	46.066	Oryzias_melastigma
ENSAMXG00000014086	lyn	98	38.773	ENSOGAG00000012572	TGS1	98	38.863	Otolemur_garnettii
ENSAMXG00000014086	lyn	98	37.413	ENSOARG00000014613	TGS1	98	38.825	Ovis_aries
ENSAMXG00000014086	lyn	98	39.404	ENSPPAG00000039058	TGS1	98	39.726	Pan_paniscus
ENSAMXG00000014086	lyn	98	38.550	ENSPPRG00000000677	TGS1	98	38.979	Panthera_pardus
ENSAMXG00000014086	lyn	98	38.524	ENSPTIG00000005122	TGS1	98	38.953	Panthera_tigris_altaica
ENSAMXG00000014086	lyn	98	38.946	ENSPTRG00000020262	TGS1	98	39.290	Pan_troglodytes
ENSAMXG00000014086	lyn	98	39.675	ENSPANG00000018910	TGS1	98	39.907	Papio_anubis
ENSAMXG00000014086	lyn	98	50.449	ENSPKIG00000005454	lyn	79	50.449	Paramormyrops_kingsleyae
ENSAMXG00000014086	lyn	97	38.435	ENSPSIG00000014983	TGS1	97	38.813	Pelodiscus_sinensis
ENSAMXG00000014086	lyn	77	75.862	ENSPMGG00000012711	lyn	88	78.995	Periophthalmus_magnuspinnatus
ENSAMXG00000014086	lyn	97	39.554	ENSPEMG00000007957	Tgs1	98	39.090	Peromyscus_maniculatus_bairdii
ENSAMXG00000014086	lyn	98	38.945	ENSPCIG00000016232	TGS1	97	38.427	Phascolarctos_cinereus
ENSAMXG00000014086	lyn	80	44.774	ENSPFOG00000001545	-	100	44.427	Poecilia_formosa
ENSAMXG00000014086	lyn	91	38.903	ENSPREG00000012261	-	99	38.672	Poecilia_reticulata
ENSAMXG00000014086	lyn	98	39.474	ENSPPYG00000018597	TGS1	98	39.612	Pongo_abelii
ENSAMXG00000014086	lyn	99	37.768	ENSPCAG00000000143	TGS1	99	37.698	Procavia_capensis
ENSAMXG00000014086	lyn	98	39.005	ENSPCOG00000013537	TGS1	98	39.166	Propithecus_coquereli
ENSAMXG00000014086	lyn	85	75.229	ENSPVAG00000016399	TGS1	86	75.463	Pteropus_vampyrus
ENSAMXG00000014086	lyn	97	44.091	ENSPNYG00000023004	lyn	94	43.710	Pundamilia_nyererei
ENSAMXG00000014086	lyn	99	68.290	ENSPNAG00000022249	lyn	100	67.933	Pygocentrus_nattereri
ENSAMXG00000014086	lyn	97	39.315	ENSRNOG00000008156	Tgs1	98	39.039	Rattus_norvegicus
ENSAMXG00000014086	lyn	98	37.731	ENSRBIG00000041893	TGS1	98	37.688	Rhinopithecus_bieti
ENSAMXG00000014086	lyn	98	39.373	ENSRROG00000035127	TGS1	98	39.489	Rhinopithecus_roxellana
ENSAMXG00000014086	lyn	93	37.604	ENSSBOG00000024469	TGS1	97	37.831	Saimiri_boliviensis_boliviensis
ENSAMXG00000014086	lyn	98	41.461	ENSSHAG00000012878	TGS1	97	40.519	Sarcophilus_harrisii
ENSAMXG00000014086	lyn	98	44.884	ENSSFOG00015001308	tgs1	88	51.364	Scleropages_formosus
ENSAMXG00000014086	lyn	99	44.664	ENSSMAG00000019469	lyn	99	44.828	Scophthalmus_maximus
ENSAMXG00000014086	lyn	62	77.093	ENSSLDG00000009024	lyn	90	77.093	Seriola_lalandi_dorsalis
ENSAMXG00000014086	lyn	94	41.396	ENSSPAG00000002170	lyn	96	42.118	Stegastes_partitus
ENSAMXG00000014086	lyn	87	35.279	ENSSSCG00000006251	TGS1	95	36.036	Sus_scrofa
ENSAMXG00000014086	lyn	83	74.299	ENSTGUG00000011050	TGS1	86	74.299	Taeniopygia_guttata
ENSAMXG00000014086	lyn	62	62.034	ENSTRUG00000009532	lyn	74	66.187	Takifugu_rubripes
ENSAMXG00000014086	lyn	89	43.603	ENSTNIG00000018133	lyn	99	44.430	Tetraodon_nigroviridis
ENSAMXG00000014086	lyn	82	78.182	ENSTBEG00000010953	TGS1	84	78.182	Tupaia_belangeri
ENSAMXG00000014086	lyn	80	41.405	ENSTTRG00000017239	TGS1	76	43.199	Tursiops_truncatus
ENSAMXG00000014086	lyn	98	37.903	ENSUAMG00000027718	TGS1	98	38.167	Ursus_americanus
ENSAMXG00000014086	lyn	92	35.545	ENSUMAG00000009761	TGS1	99	36.613	Ursus_maritimus
ENSAMXG00000014086	lyn	82	40.087	ENSVPAG00000001166	TGS1	81	41.228	Vicugna_pacos
ENSAMXG00000014086	lyn	92	34.793	ENSVVUG00000017821	TGS1	99	35.440	Vulpes_vulpes
ENSAMXG00000014086	lyn	98	39.041	ENSXETG00000005648	tgs1	98	39.384	Xenopus_tropicalis