EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014189 (Gene tree)
Gene ID: 103045388
Gene Symbol: cpeb1a
Alias: zgc:194449|zgc:194452
Full Name: cytoplasmic polyadenylation element-binding protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 14038 bases
Position: chr7:27982548-27996585
Accession: 103045388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014599	RRM_1	PF00076.22	9e-10	1	1
ENSAMXP00000031387	RRM_1	PF00076.22	9.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000014599	-	1656	XM_022671616	ENSAMXP00000014599	551 (aa)	XP_022527337	W5L437
ENSAMXT00000046781	-	1677	XM_007235088	ENSAMXP00000031387	558 (aa)	XP_007235150	-

Gene Model

Click here to download ENSAMXG00000014189's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04114	Oocyte meiosis	KEGG
amex04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014189	cpeb1a	87	63.299	ENSCVAG00000004909	cpeb1b	98	64.476	Cyprinodon_variegatus
ENSAMXG00000014189	cpeb1a	51	59.011	FBgn0004882	orb	50	59.011	Drosophila_melanogaster
ENSAMXG00000014189	cpeb1a	72	42.512	ENSEBUG00000008914	-	83	42.512	Eptatretus_burgeri
ENSAMXG00000014189	cpeb1a	91	61.905	ENSKMAG00000001929	cpeb1b	94	61.111	Kryptolebias_marmoratus
ENSAMXG00000014189	cpeb1a	92	86.015	ENSPNAG00000004246	cpeb1a	93	86.015	Pygocentrus_nattereri