EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014198 (Gene tree)
Gene ID: 103033444
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 35687 bases
Position: chrAPWO02000117.1:2076701-2112387
Accession: 103033444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014626	Suf	PF05843.14	1.5e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000014626	-	2154	XM_022665980	ENSAMXP00000014626	717 (aa)	XP_022521701	W5L464

Gene Model

Click here to download ENSAMXG00000014198's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014198	cstf3	100	90.947	ENSG00000176102	CSTF3	100	90.669	Homo_sapiens
ENSAMXG00000014198	cstf3	100	93.593	ENSAPOG00000014054	cstf3	100	93.315	Acanthochromis_polyacanthus
ENSAMXG00000014198	cstf3	99	91.408	ENSAMEG00000007187	CSTF3	98	91.127	Ailuropoda_melanoleuca
ENSAMXG00000014198	cstf3	87	89.263	ENSACIG00000005539	cstf3	100	89.263	Amphilophus_citrinellus
ENSAMXG00000014198	cstf3	100	93.315	ENSAOCG00000010930	cstf3	100	93.036	Amphiprion_ocellaris
ENSAMXG00000014198	cstf3	100	93.593	ENSAPEG00000007903	cstf3	100	93.315	Amphiprion_percula
ENSAMXG00000014198	cstf3	100	92.758	ENSATEG00000000190	cstf3	100	92.479	Anabas_testudineus
ENSAMXG00000014198	cstf3	99	91.255	ENSAPLG00000007217	CSTF3	100	90.973	Anas_platyrhynchos
ENSAMXG00000014198	cstf3	100	90.542	ENSACAG00000002823	CSTF3	100	90.264	Anolis_carolinensis
ENSAMXG00000014198	cstf3	100	90.947	ENSANAG00000020699	CSTF3	100	92.320	Aotus_nancymaae
ENSAMXG00000014198	cstf3	98	93.333	ENSACLG00000007820	cstf3	100	92.340	Astatotilapia_calliptera
ENSAMXG00000014198	cstf3	100	90.947	ENSBTAG00000008617	CSTF3	100	90.963	Bos_taurus
ENSAMXG00000014198	cstf3	97	47.715	WBGene00006307	suf-1	99	47.312	Caenorhabditis_elegans
ENSAMXG00000014198	cstf3	100	90.947	ENSCJAG00000005533	CSTF3	100	92.320	Callithrix_jacchus
ENSAMXG00000014198	cstf3	100	91.086	ENSCAFG00000007264	CSTF3	100	90.808	Canis_familiaris
ENSAMXG00000014198	cstf3	99	91.549	ENSCAFG00020002715	CSTF3	99	91.268	Canis_lupus_dingo
ENSAMXG00000014198	cstf3	98	91.477	ENSCHIG00000016418	CSTF3	100	92.320	Capra_hircus
ENSAMXG00000014198	cstf3	99	91.549	ENSTSYG00000000451	CSTF3	99	94.900	Carlito_syrichta
ENSAMXG00000014198	cstf3	83	89.387	ENSCAPG00000010958	CSTF3	98	89.151	Cavia_aperea
ENSAMXG00000014198	cstf3	100	90.808	ENSCPOG00000005545	CSTF3	100	90.756	Cavia_porcellus
ENSAMXG00000014198	cstf3	100	90.947	ENSCCAG00000024790	CSTF3	100	92.320	Cebus_capucinus
ENSAMXG00000014198	cstf3	99	92.113	ENSCATG00000007080	CSTF3	100	92.320	Cercocebus_atys
ENSAMXG00000014198	cstf3	100	90.947	ENSCLAG00000016179	CSTF3	100	90.669	Chinchilla_lanigera
ENSAMXG00000014198	cstf3	78	94.382	ENSCHOG00000002497	CSTF3	79	93.633	Choloepus_hoffmanni
ENSAMXG00000014198	cstf3	100	90.960	ENSCPBG00000006753	CSTF3	100	90.682	Chrysemys_picta_bellii
ENSAMXG00000014198	cstf3	99	61.010	ENSCING00000006401	-	98	60.870	Ciona_intestinalis
ENSAMXG00000014198	cstf3	98	60.534	ENSCSAVG00000004851	-	100	60.253	Ciona_savignyi
ENSAMXG00000014198	cstf3	99	92.113	ENSCANG00000035468	CSTF3	100	92.320	Colobus_angolensis_palliatus
ENSAMXG00000014198	cstf3	100	90.808	ENSCGRG00001014773	Cstf3	100	90.529	Cricetulus_griseus_chok1gshd
ENSAMXG00000014198	cstf3	100	90.808	ENSCGRG00000004142	Cstf3	100	90.529	Cricetulus_griseus_crigri
ENSAMXG00000014198	cstf3	100	93.026	ENSCSEG00000014283	cstf3	100	92.748	Cynoglossus_semilaevis
ENSAMXG00000014198	cstf3	100	91.922	ENSCVAG00000019739	cstf3	100	91.643	Cyprinodon_variegatus
ENSAMXG00000014198	cstf3	100	93.305	ENSDARG00000018904	cstf3	100	93.026	Danio_rerio
ENSAMXG00000014198	cstf3	99	91.549	ENSDNOG00000007366	CSTF3	99	91.268	Dasypus_novemcinctus
ENSAMXG00000014198	cstf3	99	86.037	ENSDORG00000005898	Cstf3	99	86.037	Dipodomys_ordii
ENSAMXG00000014198	cstf3	98	57.182	FBgn0003559	su(f)	98	56.908	Drosophila_melanogaster
ENSAMXG00000014198	cstf3	83	91.639	ENSETEG00000017097	CSTF3	83	91.639	Echinops_telfairi
ENSAMXG00000014198	cstf3	84	74.503	ENSEBUG00000015459	cstf3	96	74.338	Eptatretus_burgeri
ENSAMXG00000014198	cstf3	99	91.854	ENSEASG00005019884	CSTF3	97	94.702	Equus_asinus_asinus
ENSAMXG00000014198	cstf3	99	91.854	ENSECAG00000023338	CSTF3	97	94.702	Equus_caballus
ENSAMXG00000014198	cstf3	100	85.515	ENSEEUG00000015167	CSTF3	100	85.237	Erinaceus_europaeus
ENSAMXG00000014198	cstf3	100	92.061	ENSELUG00000023393	cstf3	100	91.783	Esox_lucius
ENSAMXG00000014198	cstf3	100	91.086	ENSFCAG00000030711	CSTF3	100	90.808	Felis_catus
ENSAMXG00000014198	cstf3	93	92.054	ENSFALG00000010764	CSTF3	100	89.264	Ficedula_albicollis
ENSAMXG00000014198	cstf3	100	90.947	ENSFDAG00000012082	CSTF3	100	90.669	Fukomys_damarensis
ENSAMXG00000014198	cstf3	100	91.643	ENSFHEG00000020623	cstf3	100	91.365	Fundulus_heteroclitus
ENSAMXG00000014198	cstf3	100	91.655	ENSGMOG00000012275	cstf3	100	91.516	Gadus_morhua
ENSAMXG00000014198	cstf3	100	90.542	ENSGALG00000011685	CSTF3	100	90.264	Gallus_gallus
ENSAMXG00000014198	cstf3	100	91.922	ENSGAFG00000002181	cstf3	100	91.643	Gambusia_affinis
ENSAMXG00000014198	cstf3	100	92.758	ENSGACG00000015997	cstf3	100	92.479	Gasterosteus_aculeatus
ENSAMXG00000014198	cstf3	100	91.099	ENSGAGG00000006200	CSTF3	100	90.821	Gopherus_agassizii
ENSAMXG00000014198	cstf3	99	87.183	ENSGGOG00000026591	CSTF3	96	92.683	Gorilla_gorilla
ENSAMXG00000014198	cstf3	98	93.333	ENSHBUG00000016656	cstf3	100	92.340	Haplochromis_burtoni
ENSAMXG00000014198	cstf3	100	90.669	ENSHGLG00000017834	CSTF3	100	90.390	Heterocephalus_glaber_female
ENSAMXG00000014198	cstf3	100	90.669	ENSHGLG00100018042	CSTF3	100	90.390	Heterocephalus_glaber_male
ENSAMXG00000014198	cstf3	98	92.362	ENSHCOG00000015218	cstf3	100	91.643	Hippocampus_comes
ENSAMXG00000014198	cstf3	100	94.282	ENSIPUG00000013170	CSTF3	100	94.003	Ictalurus_punctatus
ENSAMXG00000014198	cstf3	100	90.947	ENSSTOG00000013306	CSTF3	100	90.669	Ictidomys_tridecemlineatus
ENSAMXG00000014198	cstf3	99	81.092	ENSJJAG00000018430	Cstf3	99	80.812	Jaculus_jaculus
ENSAMXG00000014198	cstf3	100	91.086	ENSKMAG00000010916	cstf3	100	90.808	Kryptolebias_marmoratus
ENSAMXG00000014198	cstf3	100	92.618	ENSLBEG00000002306	cstf3	100	92.340	Labrus_bergylta
ENSAMXG00000014198	cstf3	100	90.795	ENSLACG00000017296	CSTF3	100	90.516	Latimeria_chalumnae
ENSAMXG00000014198	cstf3	100	93.036	ENSLOCG00000004415	cstf3	100	92.758	Lepisosteus_oculatus
ENSAMXG00000014198	cstf3	100	91.086	ENSLAFG00000008712	CSTF3	100	90.808	Loxodonta_africana
ENSAMXG00000014198	cstf3	99	92.113	ENSMFAG00000029516	CSTF3	100	92.320	Macaca_fascicularis
ENSAMXG00000014198	cstf3	100	90.947	ENSMMUG00000002542	CSTF3	100	90.669	Macaca_mulatta
ENSAMXG00000014198	cstf3	99	92.113	ENSMNEG00000021807	CSTF3	100	92.320	Macaca_nemestrina
ENSAMXG00000014198	cstf3	99	92.113	ENSMLEG00000039594	CSTF3	97	95.787	Mandrillus_leucophaeus
ENSAMXG00000014198	cstf3	100	92.897	ENSMAMG00000020423	cstf3	100	92.618	Mastacembelus_armatus
ENSAMXG00000014198	cstf3	99	93.362	ENSMZEG00005012082	cstf3	100	92.201	Maylandia_zebra
ENSAMXG00000014198	cstf3	100	90.403	ENSMGAG00000001383	CSTF3	100	90.125	Meleagris_gallopavo
ENSAMXG00000014198	cstf3	100	90.669	ENSMAUG00000002487	Cstf3	100	90.390	Mesocricetus_auratus
ENSAMXG00000014198	cstf3	100	90.808	ENSMICG00000004784	CSTF3	100	92.160	Microcebus_murinus
ENSAMXG00000014198	cstf3	100	90.808	ENSMOCG00000017583	Cstf3	100	90.529	Microtus_ochrogaster
ENSAMXG00000014198	cstf3	99	92.797	ENSMMOG00000016026	cstf3	94	92.514	Mola_mola
ENSAMXG00000014198	cstf3	100	90.669	ENSMODG00000009745	-	100	90.390	Monodelphis_domestica
ENSAMXG00000014198	cstf3	100	78.969	ENSMODG00000025205	-	100	78.552	Monodelphis_domestica
ENSAMXG00000014198	cstf3	100	93.175	ENSMALG00000012050	cstf3	100	92.618	Monopterus_albus
ENSAMXG00000014198	cstf3	100	90.808	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.529	Mus_caroli
ENSAMXG00000014198	cstf3	100	90.808	ENSMUSG00000027176	Cstf3	100	90.529	Mus_musculus
ENSAMXG00000014198	cstf3	100	90.808	MGP_PahariEiJ_G0025464	Cstf3	100	90.529	Mus_pahari
ENSAMXG00000014198	cstf3	100	90.808	MGP_SPRETEiJ_G0024939	Cstf3	100	90.529	Mus_spretus
ENSAMXG00000014198	cstf3	100	90.947	ENSMPUG00000011457	CSTF3	100	90.669	Mustela_putorius_furo
ENSAMXG00000014198	cstf3	99	91.549	ENSMLUG00000003073	-	99	91.268	Myotis_lucifugus
ENSAMXG00000014198	cstf3	100	88.301	ENSMLUG00000026022	-	100	88.022	Myotis_lucifugus
ENSAMXG00000014198	cstf3	100	90.669	ENSNGAG00000010677	Cstf3	100	90.390	Nannospalax_galili
ENSAMXG00000014198	cstf3	87	94.231	ENSNBRG00000007345	cstf3	100	94.231	Neolamprologus_brichardi
ENSAMXG00000014198	cstf3	100	90.947	ENSNLEG00000017901	CSTF3	100	92.320	Nomascus_leucogenys
ENSAMXG00000014198	cstf3	71	90.625	ENSMEUG00000005640	-	98	90.588	Notamacropus_eugenii
ENSAMXG00000014198	cstf3	67	92.000	ENSOPRG00000000199	-	67	92.000	Ochotona_princeps
ENSAMXG00000014198	cstf3	86	81.774	ENSODEG00000006311	-	95	81.774	Octodon_degus
ENSAMXG00000014198	cstf3	100	90.947	ENSODEG00000016737	-	100	90.669	Octodon_degus
ENSAMXG00000014198	cstf3	98	93.191	ENSONIG00000005563	cstf3	100	92.201	Oreochromis_niloticus
ENSAMXG00000014198	cstf3	88	91.943	ENSOANG00000015140	CSTF3	97	91.918	Ornithorhynchus_anatinus
ENSAMXG00000014198	cstf3	100	90.808	ENSOCUG00000015417	CSTF3	100	90.529	Oryctolagus_cuniculus
ENSAMXG00000014198	cstf3	100	90.516	ENSORLG00000009762	cstf3	100	90.237	Oryzias_latipes
ENSAMXG00000014198	cstf3	100	90.516	ENSORLG00020005540	cstf3	100	90.237	Oryzias_latipes_hni
ENSAMXG00000014198	cstf3	100	90.377	ENSORLG00015003551	cstf3	100	90.098	Oryzias_latipes_hsok
ENSAMXG00000014198	cstf3	100	91.353	ENSOMEG00000003848	cstf3	100	91.074	Oryzias_melastigma
ENSAMXG00000014198	cstf3	100	90.430	ENSOGAG00000010229	CSTF3	100	90.153	Otolemur_garnettii
ENSAMXG00000014198	cstf3	88	92.393	ENSOARG00000017271	CSTF3	97	92.369	Ovis_aries
ENSAMXG00000014198	cstf3	99	89.577	ENSPPAG00000027358	CSTF3	99	89.437	Pan_paniscus
ENSAMXG00000014198	cstf3	100	91.086	ENSPPRG00000016852	CSTF3	100	90.808	Panthera_pardus
ENSAMXG00000014198	cstf3	100	91.086	ENSPTIG00000008716	CSTF3	100	90.808	Panthera_tigris_altaica
ENSAMXG00000014198	cstf3	100	90.947	ENSPTRG00000003485	CSTF3	100	90.669	Pan_troglodytes
ENSAMXG00000014198	cstf3	99	92.113	ENSPANG00000013722	CSTF3	97	95.787	Papio_anubis
ENSAMXG00000014198	cstf3	100	92.608	ENSPKIG00000023648	cstf3	100	92.329	Paramormyrops_kingsleyae
ENSAMXG00000014198	cstf3	100	91.099	ENSPSIG00000009173	CSTF3	100	90.821	Pelodiscus_sinensis
ENSAMXG00000014198	cstf3	76	94.708	ENSPMGG00000000164	cstf3	99	94.343	Periophthalmus_magnuspinnatus
ENSAMXG00000014198	cstf3	100	90.808	ENSPEMG00000011481	Cstf3	100	90.529	Peromyscus_maniculatus_bairdii
ENSAMXG00000014198	cstf3	99	78.401	ENSPMAG00000007282	cstf3	99	78.121	Petromyzon_marinus
ENSAMXG00000014198	cstf3	99	88.608	ENSPCIG00000026406	-	100	91.520	Phascolarctos_cinereus
ENSAMXG00000014198	cstf3	100	76.078	ENSPCIG00000030419	-	90	75.939	Phascolarctos_cinereus
ENSAMXG00000014198	cstf3	100	92.201	ENSPFOG00000017239	cstf3	100	91.922	Poecilia_formosa
ENSAMXG00000014198	cstf3	100	92.479	ENSPLAG00000009456	cstf3	100	92.061	Poecilia_latipinna
ENSAMXG00000014198	cstf3	100	92.618	ENSPMEG00000010320	cstf3	100	92.201	Poecilia_mexicana
ENSAMXG00000014198	cstf3	100	92.061	ENSPREG00000013549	cstf3	100	91.783	Poecilia_reticulata
ENSAMXG00000014198	cstf3	100	90.947	ENSPPYG00000003375	CSTF3	100	90.669	Pongo_abelii
ENSAMXG00000014198	cstf3	71	96.864	ENSPCAG00000008025	-	71	96.864	Procavia_capensis
ENSAMXG00000014198	cstf3	100	87.047	ENSPCOG00000014417	CSTF3	100	86.908	Propithecus_coquereli
ENSAMXG00000014198	cstf3	100	87.326	ENSPVAG00000002350	CSTF3	100	87.047	Pteropus_vampyrus
ENSAMXG00000014198	cstf3	99	93.362	ENSPNYG00000018259	cstf3	100	92.201	Pundamilia_nyererei
ENSAMXG00000014198	cstf3	100	96.792	ENSPNAG00000020182	cstf3	100	96.792	Pygocentrus_nattereri
ENSAMXG00000014198	cstf3	87	91.840	ENSRNOG00000012089	Cstf3	100	91.840	Rattus_norvegicus
ENSAMXG00000014198	cstf3	99	92.113	ENSRBIG00000044258	CSTF3	100	92.320	Rhinopithecus_bieti
ENSAMXG00000014198	cstf3	99	92.113	ENSRROG00000043450	CSTF3	100	92.320	Rhinopithecus_roxellana
ENSAMXG00000014198	cstf3	100	90.947	ENSSBOG00000024764	CSTF3	98	94.900	Saimiri_boliviensis_boliviensis
ENSAMXG00000014198	cstf3	100	89.972	ENSSHAG00000018128	-	100	89.694	Sarcophilus_harrisii
ENSAMXG00000014198	cstf3	100	81.616	ENSSHAG00000003135	-	99	81.198	Sarcophilus_harrisii
ENSAMXG00000014198	cstf3	100	92.608	ENSSFOG00015022133	cstf3	100	92.329	Scleropages_formosus
ENSAMXG00000014198	cstf3	100	92.618	ENSSMAG00000002197	cstf3	100	92.340	Scophthalmus_maximus
ENSAMXG00000014198	cstf3	100	93.036	ENSSDUG00000020426	cstf3	100	92.758	Seriola_dumerili
ENSAMXG00000014198	cstf3	100	93.315	ENSSLDG00000025649	cstf3	100	93.651	Seriola_lalandi_dorsalis
ENSAMXG00000014198	cstf3	100	90.529	ENSSARG00000000391	CSTF3	100	90.251	Sorex_araneus
ENSAMXG00000014198	cstf3	96	90.751	ENSSPUG00000010546	CSTF3	100	90.462	Sphenodon_punctatus
ENSAMXG00000014198	cstf3	100	93.454	ENSSPAG00000004958	cstf3	100	93.175	Stegastes_partitus
ENSAMXG00000014198	cstf3	99	90.656	ENSSSCG00000040954	CSTF3	100	90.377	Sus_scrofa
ENSAMXG00000014198	cstf3	99	90.832	ENSTGUG00000005010	CSTF3	100	90.550	Taeniopygia_guttata
ENSAMXG00000014198	cstf3	100	92.479	ENSTRUG00000004959	cstf3	100	92.201	Takifugu_rubripes
ENSAMXG00000014198	cstf3	99	92.938	ENSTNIG00000013811	cstf3	98	92.655	Tetraodon_nigroviridis
ENSAMXG00000014198	cstf3	88	89.540	ENSTBEG00000001544	CSTF3	88	89.507	Tupaia_belangeri
ENSAMXG00000014198	cstf3	100	87.883	ENSTTRG00000016366	CSTF3	100	87.604	Tursiops_truncatus
ENSAMXG00000014198	cstf3	99	91.268	ENSUMAG00000018971	CSTF3	100	92.000	Ursus_maritimus
ENSAMXG00000014198	cstf3	100	90.808	ENSVPAG00000007800	CSTF3	100	90.529	Vicugna_pacos
ENSAMXG00000014198	cstf3	99	91.549	ENSVVUG00000014938	CSTF3	100	92.320	Vulpes_vulpes
ENSAMXG00000014198	cstf3	88	75.938	ENSXETG00000021399	cstf3	99	77.561	Xenopus_tropicalis
ENSAMXG00000014198	cstf3	67	42.593	ENSXETG00000017946	-	100	42.593	Xenopus_tropicalis
ENSAMXG00000014198	cstf3	87	93.429	ENSXCOG00000011741	cstf3	100	93.429	Xiphophorus_couchianus
ENSAMXG00000014198	cstf3	100	91.922	ENSXMAG00000009545	cstf3	100	91.643	Xiphophorus_maculatus