EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014351 (Gene tree)
Gene ID: 103039249
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9105 bases
Position: chr19:27882505-27891609
Accession: 103039249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032790	RNase_H2-Ydr279	PF09468.10	1.4e-15	1	1
ENSAMXP00000014859	RNase_H2-Ydr279	PF09468.10	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047585	-	3322	XM_022680508	ENSAMXP00000032790	280 (aa)	XP_022536229	UPI000BBD9F6D
ENSAMXT00000014859	-	1412	XM_022680507	ENSAMXP00000014859	306 (aa)	XP_022536228	W5L4U7

Gene Model

Click here to download ENSAMXG00000014351's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014351	rnaseh2b	91	53.763	ENSG00000136104	RNASEH2B	96	61.364	Homo_sapiens
ENSAMXG00000014351	rnaseh2b	99	68.627	ENSAPOG00000010496	rnaseh2b	99	68.627	Acanthochromis_polyacanthus
ENSAMXG00000014351	rnaseh2b	87	52.399	ENSAMEG00000012040	RNASEH2B	92	52.399	Ailuropoda_melanoleuca
ENSAMXG00000014351	rnaseh2b	99	58.824	ENSACIG00000021991	rnaseh2b	99	65.517	Amphilophus_citrinellus
ENSAMXG00000014351	rnaseh2b	99	68.301	ENSAOCG00000013398	rnaseh2b	99	68.301	Amphiprion_ocellaris
ENSAMXG00000014351	rnaseh2b	99	67.974	ENSAPEG00000006033	rnaseh2b	99	67.974	Amphiprion_percula
ENSAMXG00000014351	rnaseh2b	99	68.954	ENSATEG00000008370	rnaseh2b	99	68.954	Anabas_testudineus
ENSAMXG00000014351	rnaseh2b	83	64.062	ENSAPLG00000008955	RNASEH2B	99	63.838	Anas_platyrhynchos
ENSAMXG00000014351	rnaseh2b	93	56.250	ENSACAG00000011679	RNASEH2B	97	56.250	Anolis_carolinensis
ENSAMXG00000014351	rnaseh2b	88	54.647	ENSANAG00000020662	RNASEH2B	87	54.647	Aotus_nancymaae
ENSAMXG00000014351	rnaseh2b	99	67.647	ENSACLG00000000467	rnaseh2b	99	67.647	Astatotilapia_calliptera
ENSAMXG00000014351	rnaseh2b	87	52.788	ENSBTAG00000020149	RNASEH2B	87	52.788	Bos_taurus
ENSAMXG00000014351	rnaseh2b	78	46.330	ENSCJAG00000003822	-	81	46.330	Callithrix_jacchus
ENSAMXG00000014351	rnaseh2b	90	52.536	ENSCJAG00000008585	-	91	52.536	Callithrix_jacchus
ENSAMXG00000014351	rnaseh2b	88	51.673	ENSCAFG00000004295	RNASEH2B	88	51.301	Canis_familiaris
ENSAMXG00000014351	rnaseh2b	88	51.673	ENSCAFG00020000250	RNASEH2B	88	51.673	Canis_lupus_dingo
ENSAMXG00000014351	rnaseh2b	75	48.052	ENSCHIG00000012982	-	82	48.052	Capra_hircus
ENSAMXG00000014351	rnaseh2b	96	48.986	ENSCHIG00000018220	RNASEH2B	97	48.986	Capra_hircus
ENSAMXG00000014351	rnaseh2b	88	51.673	ENSTSYG00000009176	-	88	51.673	Carlito_syrichta
ENSAMXG00000014351	rnaseh2b	86	46.792	ENSTSYG00000031177	-	86	46.792	Carlito_syrichta
ENSAMXG00000014351	rnaseh2b	88	47.955	ENSCAPG00000009978	RNASEH2B	91	48.327	Cavia_aperea
ENSAMXG00000014351	rnaseh2b	88	52.222	ENSCPOG00000032527	RNASEH2B	87	52.222	Cavia_porcellus
ENSAMXG00000014351	rnaseh2b	88	53.903	ENSCCAG00000026979	RNASEH2B	88	54.135	Cebus_capucinus
ENSAMXG00000014351	rnaseh2b	84	54.826	ENSCATG00000031336	RNASEH2B	73	54.826	Cercocebus_atys
ENSAMXG00000014351	rnaseh2b	87	53.358	ENSCLAG00000003517	RNASEH2B	74	53.358	Chinchilla_lanigera
ENSAMXG00000014351	rnaseh2b	88	52.128	ENSCSAG00000017701	RNASEH2B	86	52.128	Chlorocebus_sabaeus
ENSAMXG00000014351	rnaseh2b	88	45.788	ENSCHOG00000013688	RNASEH2B	89	45.788	Choloepus_hoffmanni
ENSAMXG00000014351	rnaseh2b	99	56.678	ENSCPBG00000008684	RNASEH2B	95	56.678	Chrysemys_picta_bellii
ENSAMXG00000014351	rnaseh2b	88	38.267	ENSCING00000016454	-	90	38.267	Ciona_intestinalis
ENSAMXG00000014351	rnaseh2b	88	53.676	ENSCANG00000041511	-	87	53.676	Colobus_angolensis_palliatus
ENSAMXG00000014351	rnaseh2b	87	54.478	ENSCGRG00001000611	Rnaseh2b	87	54.478	Cricetulus_griseus_chok1gshd
ENSAMXG00000014351	rnaseh2b	87	54.478	ENSCGRG00000006077	Rnaseh2b	87	54.478	Cricetulus_griseus_crigri
ENSAMXG00000014351	rnaseh2b	99	70.492	ENSCSEG00000004910	rnaseh2b	99	70.492	Cynoglossus_semilaevis
ENSAMXG00000014351	rnaseh2b	99	69.608	ENSCVAG00000005212	rnaseh2b	99	69.608	Cyprinodon_variegatus
ENSAMXG00000014351	rnaseh2b	100	76.221	ENSDARG00000005128	rnaseh2b	100	76.221	Danio_rerio
ENSAMXG00000014351	rnaseh2b	98	45.515	ENSDNOG00000034290	-	98	45.515	Dasypus_novemcinctus
ENSAMXG00000014351	rnaseh2b	87	51.292	ENSDNOG00000049666	-	87	51.292	Dasypus_novemcinctus
ENSAMXG00000014351	rnaseh2b	91	51.786	ENSDORG00000010708	Rnaseh2b	91	51.786	Dipodomys_ordii
ENSAMXG00000014351	rnaseh2b	89	30.164	FBgn0030507	CG11164	88	30.164	Drosophila_melanogaster
ENSAMXG00000014351	rnaseh2b	83	42.023	ENSEBUG00000005965	rnaseh2b	98	43.580	Eptatretus_burgeri
ENSAMXG00000014351	rnaseh2b	87	53.731	ENSEASG00005017323	RNASEH2B	87	53.731	Equus_asinus_asinus
ENSAMXG00000014351	rnaseh2b	87	53.731	ENSECAG00000014262	RNASEH2B	87	53.731	Equus_caballus
ENSAMXG00000014351	rnaseh2b	99	71.569	ENSELUG00000019560	rnaseh2b	99	71.569	Esox_lucius
ENSAMXG00000014351	rnaseh2b	84	52.510	ENSFCAG00000014257	RNASEH2B	81	52.510	Felis_catus
ENSAMXG00000014351	rnaseh2b	93	61.189	ENSFALG00000008435	RNASEH2B	97	61.189	Ficedula_albicollis
ENSAMXG00000014351	rnaseh2b	91	50.538	ENSFDAG00000009920	RNASEH2B	97	50.538	Fukomys_damarensis
ENSAMXG00000014351	rnaseh2b	99	69.608	ENSFHEG00000012160	rnaseh2b	99	69.608	Fundulus_heteroclitus
ENSAMXG00000014351	rnaseh2b	99	63.782	ENSGMOG00000016830	rnaseh2b	99	63.782	Gadus_morhua
ENSAMXG00000014351	rnaseh2b	95	59.044	ENSGALG00000017015	RNASEH2B	100	59.091	Gallus_gallus
ENSAMXG00000014351	rnaseh2b	99	67.647	ENSGAFG00000021222	rnaseh2b	99	67.647	Gambusia_affinis
ENSAMXG00000014351	rnaseh2b	99	66.667	ENSGACG00000002821	rnaseh2b	99	66.667	Gasterosteus_aculeatus
ENSAMXG00000014351	rnaseh2b	91	60.932	ENSGAGG00000014722	RNASEH2B	99	60.932	Gopherus_agassizii
ENSAMXG00000014351	rnaseh2b	91	53.191	ENSGGOG00000001044	RNASEH2B	90	53.191	Gorilla_gorilla
ENSAMXG00000014351	rnaseh2b	99	68.301	ENSHBUG00000006049	rnaseh2b	99	68.301	Haplochromis_burtoni
ENSAMXG00000014351	rnaseh2b	91	51.613	ENSHGLG00100015953	RNASEH2B	95	51.613	Heterocephalus_glaber_male
ENSAMXG00000014351	rnaseh2b	99	65.472	ENSHCOG00000003318	rnaseh2b	99	65.472	Hippocampus_comes
ENSAMXG00000014351	rnaseh2b	99	82.623	ENSIPUG00000023815	rnaseh2b	99	82.623	Ictalurus_punctatus
ENSAMXG00000014351	rnaseh2b	86	54.340	ENSSTOG00000015126	RNASEH2B	91	54.340	Ictidomys_tridecemlineatus
ENSAMXG00000014351	rnaseh2b	89	52.941	ENSJJAG00000013335	Rnaseh2b	92	52.941	Jaculus_jaculus
ENSAMXG00000014351	rnaseh2b	99	68.627	ENSKMAG00000002198	rnaseh2b	99	68.627	Kryptolebias_marmoratus
ENSAMXG00000014351	rnaseh2b	99	70.820	ENSLBEG00000019331	rnaseh2b	99	70.820	Labrus_bergylta
ENSAMXG00000014351	rnaseh2b	68	62.085	ENSLACG00000010782	RNASEH2B	91	61.947	Latimeria_chalumnae
ENSAMXG00000014351	rnaseh2b	99	66.667	ENSLOCG00000009296	rnaseh2b	99	66.667	Lepisosteus_oculatus
ENSAMXG00000014351	rnaseh2b	88	54.444	ENSLAFG00000030158	RNASEH2B	87	54.444	Loxodonta_africana
ENSAMXG00000014351	rnaseh2b	87	54.478	ENSMFAG00000038464	-	87	54.478	Macaca_fascicularis
ENSAMXG00000014351	rnaseh2b	87	50.000	ENSMMUG00000021746	RNASEH2B	85	50.000	Macaca_mulatta
ENSAMXG00000014351	rnaseh2b	87	54.478	ENSMNEG00000030580	RNASEH2B	87	54.478	Macaca_nemestrina
ENSAMXG00000014351	rnaseh2b	87	53.875	ENSMLEG00000043911	-	87	53.875	Mandrillus_leucophaeus
ENSAMXG00000014351	rnaseh2b	99	68.301	ENSMAMG00000017109	rnaseh2b	99	68.301	Mastacembelus_armatus
ENSAMXG00000014351	rnaseh2b	99	64.379	ENSMZEG00005021926	rnaseh2b	99	65.359	Maylandia_zebra
ENSAMXG00000014351	rnaseh2b	86	62.082	ENSMGAG00000015025	RNASEH2B	99	61.972	Meleagris_gallopavo
ENSAMXG00000014351	rnaseh2b	87	54.104	ENSMAUG00000016520	Rnaseh2b	87	54.104	Mesocricetus_auratus
ENSAMXG00000014351	rnaseh2b	87	52.612	ENSMICG00000000528	RNASEH2B	87	52.612	Microcebus_murinus
ENSAMXG00000014351	rnaseh2b	99	66.340	ENSMMOG00000019799	rnaseh2b	100	69.686	Mola_mola
ENSAMXG00000014351	rnaseh2b	98	53.974	ENSMODG00000010775	RNASEH2B	99	53.974	Monodelphis_domestica
ENSAMXG00000014351	rnaseh2b	99	69.281	ENSMALG00000004463	rnaseh2b	100	69.281	Monopterus_albus
ENSAMXG00000014351	rnaseh2b	72	57.207	MGP_CAROLIEiJ_G0019389	Rnaseh2b	82	57.207	Mus_caroli
ENSAMXG00000014351	rnaseh2b	87	54.478	ENSMUSG00000021932	Rnaseh2b	87	54.478	Mus_musculus
ENSAMXG00000014351	rnaseh2b	87	40.645	MGP_PahariEiJ_G0030407	-	89	42.258	Mus_pahari
ENSAMXG00000014351	rnaseh2b	78	47.945	ENSMPUG00000018010	RNASEH2B	88	48.804	Mustela_putorius_furo
ENSAMXG00000014351	rnaseh2b	88	53.532	ENSMLUG00000004065	-	87	53.532	Myotis_lucifugus
ENSAMXG00000014351	rnaseh2b	99	67.974	ENSNBRG00000003253	rnaseh2b	99	67.974	Neolamprologus_brichardi
ENSAMXG00000014351	rnaseh2b	91	53.546	ENSNLEG00000003804	RNASEH2B	90	53.546	Nomascus_leucogenys
ENSAMXG00000014351	rnaseh2b	90	57.143	ENSMEUG00000003665	RNASEH2B	96	57.143	Notamacropus_eugenii
ENSAMXG00000014351	rnaseh2b	52	54.658	ENSOPRG00000003695	-	51	54.658	Ochotona_princeps
ENSAMXG00000014351	rnaseh2b	77	47.234	ENSODEG00000005412	-	93	47.234	Octodon_degus
ENSAMXG00000014351	rnaseh2b	94	51.211	ENSODEG00000006793	-	94	51.211	Octodon_degus
ENSAMXG00000014351	rnaseh2b	99	67.647	ENSONIG00000006657	rnaseh2b	99	67.647	Oreochromis_niloticus
ENSAMXG00000014351	rnaseh2b	89	57.554	ENSOANG00000015537	RNASEH2B	96	57.554	Ornithorhynchus_anatinus
ENSAMXG00000014351	rnaseh2b	92	51.601	ENSOCUG00000008904	RNASEH2B	91	50.345	Oryctolagus_cuniculus
ENSAMXG00000014351	rnaseh2b	99	68.421	ENSORLG00000011850	rnaseh2b	100	68.421	Oryzias_latipes
ENSAMXG00000014351	rnaseh2b	99	69.408	ENSORLG00020012081	rnaseh2b	100	69.408	Oryzias_latipes_hni
ENSAMXG00000014351	rnaseh2b	99	68.750	ENSORLG00015015468	rnaseh2b	100	68.750	Oryzias_latipes_hsok
ENSAMXG00000014351	rnaseh2b	99	67.987	ENSOMEG00000012441	rnaseh2b	100	67.987	Oryzias_melastigma
ENSAMXG00000014351	rnaseh2b	88	54.044	ENSOGAG00000016486	RNASEH2B	91	54.044	Otolemur_garnettii
ENSAMXG00000014351	rnaseh2b	87	53.008	ENSOARG00000008701	RNASEH2B	90	53.008	Ovis_aries
ENSAMXG00000014351	rnaseh2b	88	54.412	ENSPPAG00000026374	RNASEH2B	90	54.412	Pan_paniscus
ENSAMXG00000014351	rnaseh2b	88	50.916	ENSPPRG00000012450	RNASEH2B	89	50.916	Panthera_pardus
ENSAMXG00000014351	rnaseh2b	88	51.282	ENSPTIG00000013918	RNASEH2B	98	51.282	Panthera_tigris_altaica
ENSAMXG00000014351	rnaseh2b	91	53.191	ENSPTRG00000005886	RNASEH2B	96	54.582	Pan_troglodytes
ENSAMXG00000014351	rnaseh2b	87	53.875	ENSPANG00000022424	-	87	53.875	Papio_anubis
ENSAMXG00000014351	rnaseh2b	99	70.492	ENSPKIG00000013386	rnaseh2b	99	70.492	Paramormyrops_kingsleyae
ENSAMXG00000014351	rnaseh2b	63	53.933	ENSPSIG00000002224	RNASEH2B	83	53.933	Pelodiscus_sinensis
ENSAMXG00000014351	rnaseh2b	64	72.449	ENSPMGG00000010299	rnaseh2b	95	72.449	Periophthalmus_magnuspinnatus
ENSAMXG00000014351	rnaseh2b	87	55.970	ENSPEMG00000019721	Rnaseh2b	87	55.970	Peromyscus_maniculatus_bairdii
ENSAMXG00000014351	rnaseh2b	94	51.557	ENSPCIG00000014535	-	97	51.557	Phascolarctos_cinereus
ENSAMXG00000014351	rnaseh2b	99	69.156	ENSPFOG00000016722	rnaseh2b	99	69.156	Poecilia_formosa
ENSAMXG00000014351	rnaseh2b	99	69.281	ENSPLAG00000011755	rnaseh2b	99	69.281	Poecilia_latipinna
ENSAMXG00000014351	rnaseh2b	99	69.608	ENSPMEG00000002721	rnaseh2b	99	69.608	Poecilia_mexicana
ENSAMXG00000014351	rnaseh2b	99	68.954	ENSPREG00000007737	rnaseh2b	99	68.954	Poecilia_reticulata
ENSAMXG00000014351	rnaseh2b	91	53.191	ENSPPYG00000005378	RNASEH2B	90	53.191	Pongo_abelii
ENSAMXG00000014351	rnaseh2b	87	53.532	ENSPCOG00000026623	RNASEH2B	87	53.532	Propithecus_coquereli
ENSAMXG00000014351	rnaseh2b	75	51.709	ENSPVAG00000000508	RNASEH2B	88	51.709	Pteropus_vampyrus
ENSAMXG00000014351	rnaseh2b	99	67.974	ENSPNYG00000013552	rnaseh2b	99	67.974	Pundamilia_nyererei
ENSAMXG00000014351	rnaseh2b	100	85.016	ENSPNAG00000024825	rnaseh2b	100	85.016	Pygocentrus_nattereri
ENSAMXG00000014351	rnaseh2b	87	53.731	ENSRNOG00000009192	Rnaseh2b	87	53.731	Rattus_norvegicus
ENSAMXG00000014351	rnaseh2b	85	49.237	ENSRBIG00000036017	-	95	41.739	Rhinopithecus_bieti
ENSAMXG00000014351	rnaseh2b	88	53.903	ENSRBIG00000028928	-	87	53.903	Rhinopithecus_bieti
ENSAMXG00000014351	rnaseh2b	84	40.833	ENSRROG00000044915	-	94	40.574	Rhinopithecus_roxellana
ENSAMXG00000014351	rnaseh2b	88	53.903	ENSRROG00000018808	-	87	53.903	Rhinopithecus_roxellana
ENSAMXG00000014351	rnaseh2b	88	54.275	ENSSBOG00000008081	RNASEH2B	96	54.275	Saimiri_boliviensis_boliviensis
ENSAMXG00000014351	rnaseh2b	99	55.700	ENSSHAG00000016190	RNASEH2B	100	55.700	Sarcophilus_harrisii
ENSAMXG00000014351	rnaseh2b	99	70.588	ENSSFOG00015010190	rnaseh2b	100	70.588	Scleropages_formosus
ENSAMXG00000014351	rnaseh2b	99	67.974	ENSSMAG00000001546	rnaseh2b	99	67.974	Scophthalmus_maximus
ENSAMXG00000014351	rnaseh2b	99	70.261	ENSSDUG00000007567	rnaseh2b	99	70.261	Seriola_dumerili
ENSAMXG00000014351	rnaseh2b	99	67.752	ENSSLDG00000012485	rnaseh2b	99	67.752	Seriola_lalandi_dorsalis
ENSAMXG00000014351	rnaseh2b	92	55.124	ENSSPUG00000006745	-	99	55.124	Sphenodon_punctatus
ENSAMXG00000014351	rnaseh2b	99	68.301	ENSSPAG00000020926	rnaseh2b	99	68.301	Stegastes_partitus
ENSAMXG00000014351	rnaseh2b	87	52.256	ENSSSCG00000024385	RNASEH2B	96	52.869	Sus_scrofa
ENSAMXG00000014351	rnaseh2b	88	63.100	ENSTGUG00000012104	RNASEH2B	99	63.100	Taeniopygia_guttata
ENSAMXG00000014351	rnaseh2b	99	70.915	ENSTRUG00000015098	rnaseh2b	99	70.915	Takifugu_rubripes
ENSAMXG00000014351	rnaseh2b	99	70.455	ENSTNIG00000013861	rnaseh2b	99	70.455	Tetraodon_nigroviridis
ENSAMXG00000014351	rnaseh2b	86	47.761	ENSTTRG00000010761	RNASEH2B	87	47.761	Tursiops_truncatus
ENSAMXG00000014351	rnaseh2b	87	52.985	ENSUAMG00000022849	RNASEH2B	96	52.985	Ursus_americanus
ENSAMXG00000014351	rnaseh2b	87	52.239	ENSUMAG00000018556	RNASEH2B	96	52.239	Ursus_maritimus
ENSAMXG00000014351	rnaseh2b	86	53.759	ENSVPAG00000005679	RNASEH2B	92	53.759	Vicugna_pacos
ENSAMXG00000014351	rnaseh2b	88	52.416	ENSVVUG00000024015	RNASEH2B	81	52.416	Vulpes_vulpes
ENSAMXG00000014351	rnaseh2b	99	56.026	ENSXETG00000020720	rnaseh2b	100	56.026	Xenopus_tropicalis
ENSAMXG00000014351	rnaseh2b	99	68.078	ENSXCOG00000018732	rnaseh2b	99	68.078	Xiphophorus_couchianus
ENSAMXG00000014351	rnaseh2b	99	69.608	ENSXMAG00000022554	rnaseh2b	99	69.608	Xiphophorus_maculatus