EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014406 (Gene tree)
Gene ID: 103028376
Gene Symbol: -
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 29507 bases
Position: chr14:25586953-25616459
Accession: 103028376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014851	SEN1_N	PF12726.7	2.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041700	-	6639	-	ENSAMXP00000036803	2212 (aa)	-	-
ENSAMXT00000014851	-	6984	XM_007256557	ENSAMXP00000014851	2327 (aa)	XP_007256619	W5L4T9

Gene Model

Click here to download ENSAMXG00000014406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014406	-	85	42.631	ENSG00000107290	SETX	76	44.054	Homo_sapiens
ENSAMXG00000014406	-	84	42.925	ENSCJAG00000018245	SETX	75	43.175	Callithrix_jacchus
ENSAMXG00000014406	-	85	42.472	ENSCPOG00000001492	SETX	79	42.472	Cavia_porcellus
ENSAMXG00000014406	-	83	42.561	ENSCLAG00000012582	SETX	76	42.634	Chinchilla_lanigera
ENSAMXG00000014406	-	83	42.130	ENSECAG00000012019	SETX	75	42.448	Equus_caballus
ENSAMXG00000014406	-	100	39.992	ENSELUG00000022536	-	93	44.954	Esox_lucius
ENSAMXG00000014406	-	79	43.914	ENSFCAG00000007102	SETX	70	43.914	Felis_catus
ENSAMXG00000014406	-	83	41.186	ENSFALG00000001464	SETX	55	45.225	Ficedula_albicollis
ENSAMXG00000014406	-	85	40.412	ENSGGOG00000027664	SETX	77	46.039	Gorilla_gorilla
ENSAMXG00000014406	-	99	50.268	ENSIPUG00000006685	setx	99	50.333	Ictalurus_punctatus
ENSAMXG00000014406	-	88	43.150	ENSLOCG00000004264	SETX	82	52.484	Lepisosteus_oculatus
ENSAMXG00000014406	-	82	43.993	ENSMOCG00000000848	Setx	76	43.894	Microtus_ochrogaster
ENSAMXG00000014406	-	84	44.152	MGP_PahariEiJ_G0024821	Setx	77	44.152	Mus_pahari
ENSAMXG00000014406	-	84	42.536	ENSNLEG00000012839	SETX	72	42.536	Nomascus_leucogenys
ENSAMXG00000014406	-	73	42.669	ENSOCUG00000005616	SETX	66	42.669	Oryctolagus_cuniculus
ENSAMXG00000014406	-	76	43.016	ENSOGAG00000013387	SETX	71	43.016	Otolemur_garnettii
ENSAMXG00000014406	-	85	42.540	ENSPPAG00000004108	SETX	77	46.257	Pan_paniscus
ENSAMXG00000014406	-	79	43.750	ENSPPRG00000012867	SETX	70	43.750	Panthera_pardus
ENSAMXG00000014406	-	84	43.750	ENSPTIG00000021101	SETX	70	43.750	Panthera_tigris_altaica
ENSAMXG00000014406	-	85	42.540	ENSPTRG00000021495	SETX	77	46.257	Pan_troglodytes
ENSAMXG00000014406	-	99	40.736	ENSPKIG00000025162	SETX	94	49.603	Paramormyrops_kingsleyae
ENSAMXG00000014406	-	86	42.540	ENSSPUG00000016332	SETX	75	47.585	Sphenodon_punctatus
ENSAMXG00000014406	-	80	51.128	ENSSSCG00000005724	SETX	77	45.787	Sus_scrofa
ENSAMXG00000014406	-	86	42.390	ENSTGUG00000005117	SETX	55	45.455	Taeniopygia_guttata
ENSAMXG00000014406	-	84	41.452	ENSXETG00000006254	setx	83	41.452	Xenopus_tropicalis