EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014415 (Gene tree)
Gene ID: 103047645
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12568 bases
Position: chr17:6894140-6906707
Accession: 103047645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014902	NMD3	PF04981.13	7.9e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000014902	-	3482	XM_007258400	ENSAMXP00000014902	504 (aa)	XP_007258462	W5L4Z0

Gene Model

Click here to download ENSAMXG00000014415's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014415	nmd3	99	77.778	ENSG00000169251	NMD3	100	80.275	Homo_sapiens
ENSAMXG00000014415	nmd3	100	90.278	ENSAPOG00000022912	nmd3	100	90.278	Acanthochromis_polyacanthus
ENSAMXG00000014415	nmd3	99	78.020	ENSAMEG00000001584	NMD3	99	78.020	Ailuropoda_melanoleuca
ENSAMXG00000014415	nmd3	100	84.921	ENSACIG00000015196	nmd3	100	84.921	Amphilophus_citrinellus
ENSAMXG00000014415	nmd3	100	90.675	ENSAOCG00000009086	nmd3	100	90.675	Amphiprion_ocellaris
ENSAMXG00000014415	nmd3	100	90.278	ENSAPEG00000000329	nmd3	100	90.278	Amphiprion_percula
ENSAMXG00000014415	nmd3	100	90.278	ENSATEG00000014351	nmd3	100	90.278	Anabas_testudineus
ENSAMXG00000014415	nmd3	100	77.822	ENSAPLG00000014786	NMD3	100	77.822	Anas_platyrhynchos
ENSAMXG00000014415	nmd3	100	80.792	ENSACAG00000007349	NMD3	100	80.792	Anolis_carolinensis
ENSAMXG00000014415	nmd3	99	78.357	ENSANAG00000026434	NMD3	99	78.357	Aotus_nancymaae
ENSAMXG00000014415	nmd3	100	90.675	ENSACLG00000015520	nmd3	100	90.675	Astatotilapia_calliptera
ENSAMXG00000014415	nmd3	99	77.579	ENSBTAG00000016228	NMD3	100	77.579	Bos_taurus
ENSAMXG00000014415	nmd3	96	49.593	WBGene00012030	T25G3.3	96	49.593	Caenorhabditis_elegans
ENSAMXG00000014415	nmd3	99	78.313	ENSCJAG00000002900	NMD3	97	78.313	Callithrix_jacchus
ENSAMXG00000014415	nmd3	99	77.510	ENSCAFG00000014352	NMD3	97	77.510	Canis_familiaris
ENSAMXG00000014415	nmd3	99	77.183	ENSCAFG00020021145	NMD3	99	77.183	Canis_lupus_dingo
ENSAMXG00000014415	nmd3	99	76.786	ENSCHIG00000016015	NMD3	100	76.786	Capra_hircus
ENSAMXG00000014415	nmd3	99	78.175	ENSTSYG00000002155	NMD3	99	78.175	Carlito_syrichta
ENSAMXG00000014415	nmd3	79	76.750	ENSCAPG00000017861	NMD3	93	76.750	Cavia_aperea
ENSAMXG00000014415	nmd3	87	77.346	ENSCPOG00000005953	NMD3	94	77.346	Cavia_porcellus
ENSAMXG00000014415	nmd3	99	77.976	ENSCCAG00000037460	NMD3	100	77.976	Cebus_capucinus
ENSAMXG00000014415	nmd3	99	77.976	ENSCATG00000030022	NMD3	100	77.976	Cercocebus_atys
ENSAMXG00000014415	nmd3	99	78.175	ENSCLAG00000003155	NMD3	100	78.175	Chinchilla_lanigera
ENSAMXG00000014415	nmd3	99	77.976	ENSCSAG00000012333	NMD3	100	77.976	Chlorocebus_sabaeus
ENSAMXG00000014415	nmd3	80	76.761	ENSCHOG00000001240	NMD3	80	76.761	Choloepus_hoffmanni
ENSAMXG00000014415	nmd3	99	81.349	ENSCPBG00000018318	NMD3	99	81.857	Chrysemys_picta_bellii
ENSAMXG00000014415	nmd3	97	54.065	ENSCING00000002129	-	97	54.065	Ciona_intestinalis
ENSAMXG00000014415	nmd3	87	54.318	ENSCSAVG00000001120	-	97	54.318	Ciona_savignyi
ENSAMXG00000014415	nmd3	99	72.565	ENSCANG00000042939	NMD3	95	72.167	Colobus_angolensis_palliatus
ENSAMXG00000014415	nmd3	91	68.330	ENSCGRG00001001792	Nmd3	97	68.330	Cricetulus_griseus_chok1gshd
ENSAMXG00000014415	nmd3	97	77.597	ENSCGRG00000007947	Nmd3	98	77.597	Cricetulus_griseus_crigri
ENSAMXG00000014415	nmd3	100	88.690	ENSCSEG00000017954	nmd3	100	88.690	Cynoglossus_semilaevis
ENSAMXG00000014415	nmd3	100	82.341	ENSCVAG00000004672	nmd3	100	81.944	Cyprinodon_variegatus
ENSAMXG00000014415	nmd3	100	87.129	ENSDARG00000015676	nmd3	100	87.129	Danio_rerio
ENSAMXG00000014415	nmd3	99	75.794	ENSDNOG00000045222	NMD3	100	75.794	Dasypus_novemcinctus
ENSAMXG00000014415	nmd3	97	71.166	ENSDORG00000005716	Nmd3	100	71.053	Dipodomys_ordii
ENSAMXG00000014415	nmd3	98	54.108	FBgn0023542	Nmd3	95	53.908	Drosophila_melanogaster
ENSAMXG00000014415	nmd3	99	67.262	ENSETEG00000003168	NMD3	99	67.262	Echinops_telfairi
ENSAMXG00000014415	nmd3	89	58.129	ENSEBUG00000014316	nmd3	97	58.129	Eptatretus_burgeri
ENSAMXG00000014415	nmd3	99	78.175	ENSEASG00005018672	NMD3	100	78.175	Equus_asinus_asinus
ENSAMXG00000014415	nmd3	99	78.313	ENSECAG00000000188	NMD3	97	78.313	Equus_caballus
ENSAMXG00000014415	nmd3	94	58.051	ENSEEUG00000010642	-	100	58.051	Erinaceus_europaeus
ENSAMXG00000014415	nmd3	100	87.500	ENSELUG00000024123	nmd3	100	87.500	Esox_lucius
ENSAMXG00000014415	nmd3	99	78.313	ENSFCAG00000022867	NMD3	99	78.175	Felis_catus
ENSAMXG00000014415	nmd3	94	79.579	ENSFALG00000008711	NMD3	100	79.579	Ficedula_albicollis
ENSAMXG00000014415	nmd3	97	65.923	ENSFDAG00000012197	-	98	65.914	Fukomys_damarensis
ENSAMXG00000014415	nmd3	99	77.822	ENSFDAG00000013724	-	100	77.822	Fukomys_damarensis
ENSAMXG00000014415	nmd3	100	88.690	ENSFHEG00000000415	nmd3	100	88.690	Fundulus_heteroclitus
ENSAMXG00000014415	nmd3	97	84.867	ENSGMOG00000009675	nmd3	100	84.867	Gadus_morhua
ENSAMXG00000014415	nmd3	100	80.000	ENSGALG00000009533	NMD3	100	80.000	Gallus_gallus
ENSAMXG00000014415	nmd3	99	89.738	ENSGAFG00000012798	nmd3	94	89.738	Gambusia_affinis
ENSAMXG00000014415	nmd3	100	86.508	ENSGACG00000010028	nmd3	100	86.508	Gasterosteus_aculeatus
ENSAMXG00000014415	nmd3	99	81.349	ENSGAGG00000006556	NMD3	99	81.349	Gopherus_agassizii
ENSAMXG00000014415	nmd3	99	63.817	ENSGGOG00000028590	-	99	64.016	Gorilla_gorilla
ENSAMXG00000014415	nmd3	99	78.175	ENSGGOG00000007157	NMD3	100	78.175	Gorilla_gorilla
ENSAMXG00000014415	nmd3	100	90.675	ENSHBUG00000001781	nmd3	100	90.675	Haplochromis_burtoni
ENSAMXG00000014415	nmd3	99	63.690	ENSHGLG00000010477	-	100	63.690	Heterocephalus_glaber_female
ENSAMXG00000014415	nmd3	99	77.579	ENSHGLG00000014451	-	100	77.579	Heterocephalus_glaber_female
ENSAMXG00000014415	nmd3	99	77.579	ENSHGLG00100006613	-	100	77.579	Heterocephalus_glaber_male
ENSAMXG00000014415	nmd3	99	63.889	ENSHGLG00100001042	-	100	63.889	Heterocephalus_glaber_male
ENSAMXG00000014415	nmd3	99	87.849	ENSHCOG00000004292	nmd3	92	87.849	Hippocampus_comes
ENSAMXG00000014415	nmd3	100	90.476	ENSIPUG00000005073	nmd3	100	90.476	Ictalurus_punctatus
ENSAMXG00000014415	nmd3	99	78.373	ENSSTOG00000001899	NMD3	100	78.373	Ictidomys_tridecemlineatus
ENSAMXG00000014415	nmd3	97	78.528	ENSJJAG00000019759	Nmd3	99	78.528	Jaculus_jaculus
ENSAMXG00000014415	nmd3	100	89.286	ENSKMAG00000020427	nmd3	100	89.286	Kryptolebias_marmoratus
ENSAMXG00000014415	nmd3	100	87.945	ENSLBEG00000022216	nmd3	100	87.945	Labrus_bergylta
ENSAMXG00000014415	nmd3	99	76.954	ENSLACG00000005731	NMD3	99	80.320	Latimeria_chalumnae
ENSAMXG00000014415	nmd3	100	87.129	ENSLOCG00000003561	nmd3	100	87.129	Lepisosteus_oculatus
ENSAMXG00000014415	nmd3	99	76.040	ENSLAFG00000007231	NMD3	100	76.040	Loxodonta_africana
ENSAMXG00000014415	nmd3	99	77.778	ENSMFAG00000040934	NMD3	100	77.778	Macaca_fascicularis
ENSAMXG00000014415	nmd3	99	76.938	ENSMMUG00000009564	NMD3	99	76.603	Macaca_mulatta
ENSAMXG00000014415	nmd3	99	77.778	ENSMNEG00000034626	NMD3	100	77.778	Macaca_nemestrina
ENSAMXG00000014415	nmd3	88	77.703	ENSMLEG00000002741	NMD3	100	77.703	Mandrillus_leucophaeus
ENSAMXG00000014415	nmd3	100	89.484	ENSMAMG00000012427	nmd3	100	89.484	Mastacembelus_armatus
ENSAMXG00000014415	nmd3	100	90.675	ENSMZEG00005016888	nmd3	100	90.675	Maylandia_zebra
ENSAMXG00000014415	nmd3	100	79.406	ENSMGAG00000010498	NMD3	100	79.406	Meleagris_gallopavo
ENSAMXG00000014415	nmd3	99	76.786	ENSMAUG00000000633	Nmd3	100	76.786	Mesocricetus_auratus
ENSAMXG00000014415	nmd3	99	77.976	ENSMICG00000049196	NMD3	100	77.976	Microcebus_murinus
ENSAMXG00000014415	nmd3	99	76.143	ENSMOCG00000005180	Nmd3	100	76.143	Microtus_ochrogaster
ENSAMXG00000014415	nmd3	100	87.921	ENSMMOG00000012765	nmd3	100	87.921	Mola_mola
ENSAMXG00000014415	nmd3	99	62.863	ENSMODG00000016296	NMD3	100	63.077	Monodelphis_domestica
ENSAMXG00000014415	nmd3	100	89.881	ENSMALG00000009256	nmd3	100	89.881	Monopterus_albus
ENSAMXG00000014415	nmd3	99	76.587	MGP_CAROLIEiJ_G0025069	Nmd3	100	76.587	Mus_caroli
ENSAMXG00000014415	nmd3	99	76.587	ENSMUSG00000027787	Nmd3	100	76.587	Mus_musculus
ENSAMXG00000014415	nmd3	99	76.587	MGP_PahariEiJ_G0026512	Nmd3	100	76.587	Mus_pahari
ENSAMXG00000014415	nmd3	99	76.786	MGP_SPRETEiJ_G0026011	Nmd3	100	76.786	Mus_spretus
ENSAMXG00000014415	nmd3	99	78.175	ENSMPUG00000002955	NMD3	99	78.175	Mustela_putorius_furo
ENSAMXG00000014415	nmd3	97	74.593	ENSMLUG00000000701	NMD3	97	74.593	Myotis_lucifugus
ENSAMXG00000014415	nmd3	99	76.740	ENSNGAG00000012307	Nmd3	99	76.740	Nannospalax_galili
ENSAMXG00000014415	nmd3	100	90.278	ENSNBRG00000003324	nmd3	100	90.278	Neolamprologus_brichardi
ENSAMXG00000014415	nmd3	99	77.976	ENSNLEG00000004655	NMD3	100	77.976	Nomascus_leucogenys
ENSAMXG00000014415	nmd3	73	67.544	ENSOPRG00000007690	-	73	67.544	Ochotona_princeps
ENSAMXG00000014415	nmd3	99	77.976	ENSODEG00000006270	NMD3	100	77.976	Octodon_degus
ENSAMXG00000014415	nmd3	100	91.468	ENSONIG00000003643	nmd3	100	91.468	Oreochromis_niloticus
ENSAMXG00000014415	nmd3	99	77.246	ENSOCUG00000017454	NMD3	100	77.246	Oryctolagus_cuniculus
ENSAMXG00000014415	nmd3	100	89.087	ENSORLG00000006279	nmd3	100	89.087	Oryzias_latipes
ENSAMXG00000014415	nmd3	100	88.889	ENSORLG00020003843	nmd3	100	88.889	Oryzias_latipes_hni
ENSAMXG00000014415	nmd3	100	88.492	ENSORLG00015006379	nmd3	100	88.492	Oryzias_latipes_hsok
ENSAMXG00000014415	nmd3	100	89.683	ENSOMEG00000012144	nmd3	100	89.683	Oryzias_melastigma
ENSAMXG00000014415	nmd3	99	77.183	ENSOGAG00000014910	NMD3	100	77.183	Otolemur_garnettii
ENSAMXG00000014415	nmd3	99	77.200	ENSOARG00000001883	NMD3	97	77.200	Ovis_aries
ENSAMXG00000014415	nmd3	99	77.778	ENSPPAG00000043829	NMD3	100	77.778	Pan_paniscus
ENSAMXG00000014415	nmd3	99	78.557	ENSPPRG00000000724	NMD3	97	78.557	Panthera_pardus
ENSAMXG00000014415	nmd3	99	77.976	ENSPTIG00000016761	NMD3	99	77.976	Panthera_tigris_altaica
ENSAMXG00000014415	nmd3	99	77.778	ENSPTRG00000015586	NMD3	100	77.778	Pan_troglodytes
ENSAMXG00000014415	nmd3	99	77.137	ENSPANG00000006665	NMD3	95	77.137	Papio_anubis
ENSAMXG00000014415	nmd3	100	88.095	ENSPKIG00000009928	nmd3	100	88.095	Paramormyrops_kingsleyae
ENSAMXG00000014415	nmd3	100	80.000	ENSPSIG00000007591	NMD3	100	80.000	Pelodiscus_sinensis
ENSAMXG00000014415	nmd3	100	83.929	ENSPMGG00000014015	nmd3	100	83.929	Periophthalmus_magnuspinnatus
ENSAMXG00000014415	nmd3	99	76.984	ENSPEMG00000021880	Nmd3	100	76.984	Peromyscus_maniculatus_bairdii
ENSAMXG00000014415	nmd3	99	81.349	ENSPCIG00000020869	NMD3	100	81.349	Phascolarctos_cinereus
ENSAMXG00000014415	nmd3	100	89.881	ENSPFOG00000012103	nmd3	100	89.881	Poecilia_formosa
ENSAMXG00000014415	nmd3	100	90.079	ENSPLAG00000008087	nmd3	100	90.079	Poecilia_latipinna
ENSAMXG00000014415	nmd3	100	89.881	ENSPMEG00000008506	nmd3	100	89.881	Poecilia_mexicana
ENSAMXG00000014415	nmd3	100	90.079	ENSPREG00000001848	nmd3	100	90.079	Poecilia_reticulata
ENSAMXG00000014415	nmd3	99	77.976	ENSPPYG00000014263	NMD3	100	77.976	Pongo_abelii
ENSAMXG00000014415	nmd3	91	63.913	ENSPCAG00000009851	NMD3	100	63.913	Procavia_capensis
ENSAMXG00000014415	nmd3	85	74.790	ENSPVAG00000003301	NMD3	85	74.790	Pteropus_vampyrus
ENSAMXG00000014415	nmd3	100	90.476	ENSPNYG00000006778	nmd3	100	90.476	Pundamilia_nyererei
ENSAMXG00000014415	nmd3	100	94.246	ENSPNAG00000009442	nmd3	100	94.246	Pygocentrus_nattereri
ENSAMXG00000014415	nmd3	99	75.992	ENSRNOG00000009310	Nmd3	100	75.992	Rattus_norvegicus
ENSAMXG00000014415	nmd3	99	74.008	ENSRBIG00000040379	NMD3	100	74.008	Rhinopithecus_bieti
ENSAMXG00000014415	nmd3	99	77.778	ENSRROG00000036181	NMD3	100	77.778	Rhinopithecus_roxellana
ENSAMXG00000014415	nmd3	94	44.467	YHR170W	NMD3	94	44.668	Saccharomyces_cerevisiae
ENSAMXG00000014415	nmd3	99	77.600	ENSSBOG00000024021	NMD3	99	77.600	Saimiri_boliviensis_boliviensis
ENSAMXG00000014415	nmd3	99	75.595	ENSSHAG00000016044	NMD3	100	75.595	Sarcophilus_harrisii
ENSAMXG00000014415	nmd3	100	90.278	ENSSFOG00015003609	nmd3	100	90.278	Scleropages_formosus
ENSAMXG00000014415	nmd3	100	88.492	ENSSMAG00000012887	nmd3	100	88.492	Scophthalmus_maximus
ENSAMXG00000014415	nmd3	100	90.873	ENSSDUG00000023721	nmd3	100	90.873	Seriola_dumerili
ENSAMXG00000014415	nmd3	100	91.071	ENSSLDG00000006565	nmd3	100	91.071	Seriola_lalandi_dorsalis
ENSAMXG00000014415	nmd3	97	77.710	ENSSARG00000010402	NMD3	99	77.710	Sorex_araneus
ENSAMXG00000014415	nmd3	99	78.600	ENSSPUG00000018791	NMD3	100	78.600	Sphenodon_punctatus
ENSAMXG00000014415	nmd3	100	90.476	ENSSPAG00000014328	nmd3	100	90.476	Stegastes_partitus
ENSAMXG00000014415	nmd3	99	77.510	ENSSSCG00000022952	NMD3	100	77.381	Sus_scrofa
ENSAMXG00000014415	nmd3	91	77.874	ENSTGUG00000015141	-	100	77.874	Taeniopygia_guttata
ENSAMXG00000014415	nmd3	99	79.167	ENSTGUG00000011140	-	100	79.167	Taeniopygia_guttata
ENSAMXG00000014415	nmd3	100	88.492	ENSTRUG00000005958	nmd3	100	88.492	Takifugu_rubripes
ENSAMXG00000014415	nmd3	99	56.349	ENSTBEG00000011783	-	100	56.349	Tupaia_belangeri
ENSAMXG00000014415	nmd3	99	73.413	ENSTTRG00000012938	NMD3	100	73.413	Tursiops_truncatus
ENSAMXG00000014415	nmd3	80	78.109	ENSUAMG00000009305	-	99	78.109	Ursus_americanus
ENSAMXG00000014415	nmd3	99	78.557	ENSUMAG00000011070	NMD3	99	78.514	Ursus_maritimus
ENSAMXG00000014415	nmd3	99	77.183	ENSVPAG00000008779	NMD3	100	77.183	Vicugna_pacos
ENSAMXG00000014415	nmd3	99	77.309	ENSVVUG00000023055	NMD3	99	77.309	Vulpes_vulpes
ENSAMXG00000014415	nmd3	100	81.584	ENSXETG00000027727	nmd3	100	81.584	Xenopus_tropicalis
ENSAMXG00000014415	nmd3	68	86.957	ENSXCOG00000012490	nmd3	82	93.902	Xiphophorus_couchianus
ENSAMXG00000014415	nmd3	100	90.675	ENSXMAG00000018406	nmd3	100	90.675	Xiphophorus_maculatus