EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014510 (Gene tree)
Gene ID: 103042684
Gene Symbol: exosc10
Alias: zgc:55695
Full Name: exosome component 10
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 22078 bases
Position: chr6:42627750-42649827
Accession: 103042684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040843	HRDC	PF00570.23	3.5e-14	1	1
ENSAMXP00000028234	HRDC	PF00570.23	3.7e-14	1	1
ENSAMXP00000014930	HRDC	PF00570.23	3.8e-14	1	1
ENSAMXP00000040843	PMC2NT	PF08066.12	4.1e-23	1	1
ENSAMXP00000014930	PMC2NT	PF08066.12	4.5e-23	1	1
ENSAMXP00000028234	PMC2NT	PF08066.12	4.6e-23	1	1
ENSAMXP00000040843	DNA_pol_A_exo1	PF01612.20	6.3e-46	1	1
ENSAMXP00000028234	DNA_pol_A_exo1	PF01612.20	6.8e-46	1	1
ENSAMXP00000014930	DNA_pol_A_exo1	PF01612.20	6.8e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000029780	-	4431	-	ENSAMXP00000028234	932 (aa)	-	-
ENSAMXT00000036969	-	4085	-	ENSAMXP00000040843	890 (aa)	-	-
ENSAMXT00000014930	-	4214	XM_007247958	ENSAMXP00000014930	933 (aa)	XP_007248020	W5L518

Gene Model

Click here to download ENSAMXG00000014510's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014510	exosc10	100	59.086	ENSG00000171824	EXOSC10	100	59.086	Homo_sapiens
ENSAMXG00000014510	exosc10	100	68.167	ENSAPOG00000013304	exosc10	98	72.713	Acanthochromis_polyacanthus
ENSAMXG00000014510	exosc10	100	58.170	ENSAMEG00000009546	EXOSC10	100	58.170	Ailuropoda_melanoleuca
ENSAMXG00000014510	exosc10	97	62.785	ENSACIG00000020455	exosc10	98	63.470	Amphilophus_citrinellus
ENSAMXG00000014510	exosc10	99	64.262	ENSAOCG00000018823	exosc10	99	64.262	Amphiprion_ocellaris
ENSAMXG00000014510	exosc10	99	67.774	ENSAPEG00000017786	exosc10	98	68.439	Amphiprion_percula
ENSAMXG00000014510	exosc10	100	67.802	ENSATEG00000017271	exosc10	100	67.802	Anabas_testudineus
ENSAMXG00000014510	exosc10	96	58.229	ENSAPLG00000006652	EXOSC10	98	58.229	Anas_platyrhynchos
ENSAMXG00000014510	exosc10	95	56.914	ENSANAG00000031112	EXOSC10	99	56.914	Aotus_nancymaae
ENSAMXG00000014510	exosc10	98	68.946	ENSACLG00000025226	exosc10	99	68.590	Astatotilapia_calliptera
ENSAMXG00000014510	exosc10	76	64.429	ENSBTAG00000002590	EXOSC10	99	64.429	Bos_taurus
ENSAMXG00000014510	exosc10	60	35.640	WBGene00000796	crn-3	63	35.640	Caenorhabditis_elegans
ENSAMXG00000014510	exosc10	100	58.124	ENSCJAG00000002327	EXOSC10	100	58.124	Callithrix_jacchus
ENSAMXG00000014510	exosc10	100	58.497	ENSCAFG00000016721	EXOSC10	98	58.497	Canis_familiaris
ENSAMXG00000014510	exosc10	100	58.497	ENSCAFG00020002481	EXOSC10	98	58.497	Canis_lupus_dingo
ENSAMXG00000014510	exosc10	100	56.216	ENSCHIG00000020022	EXOSC10	100	56.216	Capra_hircus
ENSAMXG00000014510	exosc10	100	55.180	ENSTSYG00000006937	EXOSC10	100	55.180	Carlito_syrichta
ENSAMXG00000014510	exosc10	96	58.951	ENSCAPG00000006494	EXOSC10	99	58.730	Cavia_aperea
ENSAMXG00000014510	exosc10	100	58.261	ENSCPOG00000011628	EXOSC10	100	56.645	Cavia_porcellus
ENSAMXG00000014510	exosc10	100	54.654	ENSCCAG00000023223	EXOSC10	100	58.675	Cebus_capucinus
ENSAMXG00000014510	exosc10	100	58.624	ENSCATG00000039000	EXOSC10	92	67.370	Cercocebus_atys
ENSAMXG00000014510	exosc10	100	57.872	ENSCLAG00000005283	EXOSC10	100	57.872	Chinchilla_lanigera
ENSAMXG00000014510	exosc10	100	58.297	ENSCSAG00000000788	EXOSC10	100	58.297	Chlorocebus_sabaeus
ENSAMXG00000014510	exosc10	83	63.849	ENSCHOG00000012713	EXOSC10	87	64.239	Choloepus_hoffmanni
ENSAMXG00000014510	exosc10	99	58.651	ENSCPBG00000022004	EXOSC10	99	58.651	Chrysemys_picta_bellii
ENSAMXG00000014510	exosc10	64	48.235	ENSCSAVG00000009049	-	100	48.235	Ciona_savignyi
ENSAMXG00000014510	exosc10	100	58.843	ENSCANG00000042813	EXOSC10	100	58.515	Colobus_angolensis_palliatus
ENSAMXG00000014510	exosc10	100	58.497	ENSCGRG00001018469	Exosc10	100	58.497	Cricetulus_griseus_chok1gshd
ENSAMXG00000014510	exosc10	100	58.279	ENSCGRG00000002278	Exosc10	100	58.279	Cricetulus_griseus_crigri
ENSAMXG00000014510	exosc10	99	67.370	ENSCSEG00000005346	exosc10	98	67.370	Cynoglossus_semilaevis
ENSAMXG00000014510	exosc10	97	68.032	ENSCVAG00000016429	exosc10	97	67.950	Cyprinodon_variegatus
ENSAMXG00000014510	exosc10	97	75.371	ENSDARG00000037708	exosc10	100	74.283	Danio_rerio
ENSAMXG00000014510	exosc10	98	57.924	ENSDNOG00000011301	EXOSC10	99	57.924	Dasypus_novemcinctus
ENSAMXG00000014510	exosc10	100	54.895	ENSDORG00000003769	Exosc10	100	54.895	Dipodomys_ordii
ENSAMXG00000014510	exosc10	91	34.677	FBgn0038269	Rrp6	92	34.677	Drosophila_melanogaster
ENSAMXG00000014510	exosc10	96	57.644	ENSETEG00000000830	EXOSC10	99	57.644	Echinops_telfairi
ENSAMXG00000014510	exosc10	73	33.755	ENSEBUG00000004395	exosc10	99	34.731	Eptatretus_burgeri
ENSAMXG00000014510	exosc10	99	58.571	ENSEASG00005018716	EXOSC10	96	67.528	Equus_asinus_asinus
ENSAMXG00000014510	exosc10	100	58.715	ENSECAG00000011639	EXOSC10	100	58.715	Equus_caballus
ENSAMXG00000014510	exosc10	68	60.835	ENSEEUG00000001166	EXOSC10	72	60.835	Erinaceus_europaeus
ENSAMXG00000014510	exosc10	98	69.317	ENSELUG00000012870	exosc10	98	68.647	Esox_lucius
ENSAMXG00000014510	exosc10	100	58.104	ENSFCAG00000000052	EXOSC10	100	58.104	Felis_catus
ENSAMXG00000014510	exosc10	100	55.315	ENSFALG00000010287	EXOSC10	100	55.315	Ficedula_albicollis
ENSAMXG00000014510	exosc10	99	57.768	ENSFDAG00000002942	EXOSC10	99	57.768	Fukomys_damarensis
ENSAMXG00000014510	exosc10	98	66.741	ENSFHEG00000010678	exosc10	95	73.754	Fundulus_heteroclitus
ENSAMXG00000014510	exosc10	84	70.315	ENSGMOG00000006131	exosc10	90	70.315	Gadus_morhua
ENSAMXG00000014510	exosc10	99	56.989	ENSGALG00000003086	EXOSC10	99	56.989	Gallus_gallus
ENSAMXG00000014510	exosc10	98	65.919	ENSGAFG00000019222	exosc10	99	66.181	Gambusia_affinis
ENSAMXG00000014510	exosc10	99	63.846	ENSGACG00000007037	exosc10	99	64.176	Gasterosteus_aculeatus
ENSAMXG00000014510	exosc10	99	59.066	ENSGAGG00000000251	EXOSC10	100	59.064	Gopherus_agassizii
ENSAMXG00000014510	exosc10	100	59.086	ENSGGOG00000010572	EXOSC10	100	59.086	Gorilla_gorilla
ENSAMXG00000014510	exosc10	93	65.914	ENSHBUG00000020328	exosc10	92	65.570	Haplochromis_burtoni
ENSAMXG00000014510	exosc10	99	58.966	ENSHGLG00000011944	EXOSC10	99	58.940	Heterocephalus_glaber_female
ENSAMXG00000014510	exosc10	99	58.966	ENSHGLG00100014444	EXOSC10	99	58.940	Heterocephalus_glaber_male
ENSAMXG00000014510	exosc10	98	65.363	ENSHCOG00000016164	exosc10	98	65.140	Hippocampus_comes
ENSAMXG00000014510	exosc10	100	74.890	ENSIPUG00000021971	exosc10	100	74.890	Ictalurus_punctatus
ENSAMXG00000014510	exosc10	100	58.766	ENSSTOG00000005459	EXOSC10	100	58.766	Ictidomys_tridecemlineatus
ENSAMXG00000014510	exosc10	98	59.645	ENSJJAG00000013716	Exosc10	99	59.645	Jaculus_jaculus
ENSAMXG00000014510	exosc10	99	67.111	ENSKMAG00000015540	exosc10	99	67.111	Kryptolebias_marmoratus
ENSAMXG00000014510	exosc10	100	67.763	ENSLBEG00000022229	exosc10	99	67.763	Labrus_bergylta
ENSAMXG00000014510	exosc10	100	62.118	ENSLACG00000016691	EXOSC10	100	62.227	Latimeria_chalumnae
ENSAMXG00000014510	exosc10	99	66.230	ENSLOCG00000006443	exosc10	99	66.230	Lepisosteus_oculatus
ENSAMXG00000014510	exosc10	97	59.459	ENSLAFG00000016894	EXOSC10	97	59.459	Loxodonta_africana
ENSAMXG00000014510	exosc10	100	58.624	ENSMFAG00000038874	EXOSC10	100	57.625	Macaca_fascicularis
ENSAMXG00000014510	exosc10	100	58.624	ENSMMUG00000019322	EXOSC10	100	58.624	Macaca_mulatta
ENSAMXG00000014510	exosc10	100	58.624	ENSMNEG00000035812	EXOSC10	100	58.624	Macaca_nemestrina
ENSAMXG00000014510	exosc10	100	58.624	ENSMLEG00000025160	EXOSC10	100	58.624	Mandrillus_leucophaeus
ENSAMXG00000014510	exosc10	99	66.630	ENSMAMG00000019375	exosc10	100	66.630	Mastacembelus_armatus
ENSAMXG00000014510	exosc10	98	68.946	ENSMZEG00005013730	exosc10	99	68.590	Maylandia_zebra
ENSAMXG00000014510	exosc10	96	57.223	ENSMGAG00000004665	EXOSC10	99	57.223	Meleagris_gallopavo
ENSAMXG00000014510	exosc10	66	67.672	ENSMAUG00000019261	Exosc10	96	67.672	Mesocricetus_auratus
ENSAMXG00000014510	exosc10	98	58.824	ENSMICG00000003858	EXOSC10	99	58.824	Microcebus_murinus
ENSAMXG00000014510	exosc10	66	67.839	ENSMOCG00000016509	Exosc10	96	67.839	Microtus_ochrogaster
ENSAMXG00000014510	exosc10	100	63.485	ENSMMOG00000009265	exosc10	98	71.451	Mola_mola
ENSAMXG00000014510	exosc10	97	59.234	ENSMODG00000011194	EXOSC10	100	59.002	Monodelphis_domestica
ENSAMXG00000014510	exosc10	100	66.191	ENSMALG00000021322	exosc10	100	66.191	Monopterus_albus
ENSAMXG00000014510	exosc10	100	57.688	MGP_CAROLIEiJ_G0026802	Exosc10	96	67.337	Mus_caroli
ENSAMXG00000014510	exosc10	100	57.424	ENSMUSG00000017264	Exosc10	96	67.169	Mus_musculus
ENSAMXG00000014510	exosc10	100	58.152	MGP_PahariEiJ_G0029150	Exosc10	96	67.839	Mus_pahari
ENSAMXG00000014510	exosc10	100	57.424	MGP_SPRETEiJ_G0027795	Exosc10	96	67.169	Mus_spretus
ENSAMXG00000014510	exosc10	100	57.814	ENSMPUG00000016434	EXOSC10	97	57.814	Mustela_putorius_furo
ENSAMXG00000014510	exosc10	100	58.279	ENSMLUG00000004276	EXOSC10	100	58.279	Myotis_lucifugus
ENSAMXG00000014510	exosc10	98	58.647	ENSNGAG00000023829	Exosc10	99	58.647	Nannospalax_galili
ENSAMXG00000014510	exosc10	98	64.819	ENSNBRG00000006256	exosc10	100	64.182	Neolamprologus_brichardi
ENSAMXG00000014510	exosc10	98	58.778	ENSNLEG00000009539	EXOSC10	98	58.621	Nomascus_leucogenys
ENSAMXG00000014510	exosc10	63	83.784	ENSMEUG00000007020	-	68	83.784	Notamacropus_eugenii
ENSAMXG00000014510	exosc10	97	59.977	ENSOPRG00000012091	EXOSC10	97	59.977	Ochotona_princeps
ENSAMXG00000014510	exosc10	98	58.158	ENSODEG00000013285	EXOSC10	99	58.602	Octodon_degus
ENSAMXG00000014510	exosc10	84	72.441	ENSONIG00000002322	exosc10	99	71.429	Oreochromis_niloticus
ENSAMXG00000014510	exosc10	98	55.727	ENSOANG00000013322	EXOSC10	99	55.702	Ornithorhynchus_anatinus
ENSAMXG00000014510	exosc10	98	59.399	ENSOCUG00000013039	EXOSC10	99	59.399	Oryctolagus_cuniculus
ENSAMXG00000014510	exosc10	98	66.816	ENSORLG00000005117	exosc10	100	67.679	Oryzias_latipes
ENSAMXG00000014510	exosc10	98	67.486	ENSORLG00020013529	exosc10	98	67.709	Oryzias_latipes_hni
ENSAMXG00000014510	exosc10	98	67.374	ENSORLG00015005525	exosc10	98	67.374	Oryzias_latipes_hsok
ENSAMXG00000014510	exosc10	98	66.592	ENSOMEG00000003337	exosc10	98	66.592	Oryzias_melastigma
ENSAMXG00000014510	exosc10	100	53.645	ENSOGAG00000013662	EXOSC10	100	53.645	Otolemur_garnettii
ENSAMXG00000014510	exosc10	100	57.872	ENSOARG00000003668	EXOSC10	100	57.872	Ovis_aries
ENSAMXG00000014510	exosc10	100	59.195	ENSPPAG00000038356	EXOSC10	100	59.195	Pan_paniscus
ENSAMXG00000014510	exosc10	100	58.086	ENSPPRG00000022976	EXOSC10	100	58.086	Panthera_pardus
ENSAMXG00000014510	exosc10	96	59.018	ENSPTIG00000012735	EXOSC10	98	59.018	Panthera_tigris_altaica
ENSAMXG00000014510	exosc10	100	56.783	ENSPTRG00000000140	EXOSC10	100	56.783	Pan_troglodytes
ENSAMXG00000014510	exosc10	100	57.969	ENSPANG00000026088	EXOSC10	100	57.969	Papio_anubis
ENSAMXG00000014510	exosc10	97	66.176	ENSPKIG00000013098	exosc10	95	66.478	Paramormyrops_kingsleyae
ENSAMXG00000014510	exosc10	100	57.804	ENSPSIG00000005078	EXOSC10	100	57.804	Pelodiscus_sinensis
ENSAMXG00000014510	exosc10	64	74.606	ENSPMGG00000022241	exosc10	99	73.208	Periophthalmus_magnuspinnatus
ENSAMXG00000014510	exosc10	76	66.284	ENSPEMG00000007753	Exosc10	97	66.284	Peromyscus_maniculatus_bairdii
ENSAMXG00000014510	exosc10	55	51.417	ENSPMAG00000006909	exosc10	100	51.417	Petromyzon_marinus
ENSAMXG00000014510	exosc10	96	54.461	ENSPCIG00000004840	EXOSC10	94	67.179	Phascolarctos_cinereus
ENSAMXG00000014510	exosc10	99	66.445	ENSPFOG00000004744	exosc10	99	66.704	Poecilia_formosa
ENSAMXG00000014510	exosc10	99	66.334	ENSPLAG00000010253	exosc10	95	72.846	Poecilia_latipinna
ENSAMXG00000014510	exosc10	99	66.224	ENSPMEG00000005740	exosc10	99	66.482	Poecilia_mexicana
ENSAMXG00000014510	exosc10	99	66.334	ENSPREG00000016285	exosc10	95	71.686	Poecilia_reticulata
ENSAMXG00000014510	exosc10	100	58.515	ENSPPYG00000001891	EXOSC10	97	58.734	Pongo_abelii
ENSAMXG00000014510	exosc10	83	62.319	ENSPCAG00000001583	EXOSC10	93	62.319	Procavia_capensis
ENSAMXG00000014510	exosc10	99	58.463	ENSPCOG00000013742	EXOSC10	99	58.463	Propithecus_coquereli
ENSAMXG00000014510	exosc10	100	58.643	ENSPVAG00000014780	EXOSC10	100	58.643	Pteropus_vampyrus
ENSAMXG00000014510	exosc10	98	69.058	ENSPNYG00000007387	exosc10	99	68.701	Pundamilia_nyererei
ENSAMXG00000014510	exosc10	97	80.931	ENSPNAG00000028864	exosc10	100	80.642	Pygocentrus_nattereri
ENSAMXG00000014510	exosc10	100	58.170	ENSRNOG00000010719	Exosc10	100	58.170	Rattus_norvegicus
ENSAMXG00000014510	exosc10	100	52.845	ENSRBIG00000039772	EXOSC10	100	52.845	Rhinopithecus_bieti
ENSAMXG00000014510	exosc10	100	58.734	ENSRROG00000036700	EXOSC10	100	58.734	Rhinopithecus_roxellana
ENSAMXG00000014510	exosc10	97	55.017	ENSSBOG00000020768	EXOSC10	99	55.017	Saimiri_boliviensis_boliviensis
ENSAMXG00000014510	exosc10	95	58.409	ENSSHAG00000013572	EXOSC10	99	58.977	Sarcophilus_harrisii
ENSAMXG00000014510	exosc10	96	66.972	ENSSFOG00015004512	exosc10	98	67.202	Scleropages_formosus
ENSAMXG00000014510	exosc10	97	67.720	ENSSMAG00000017318	exosc10	95	73.077	Scophthalmus_maximus
ENSAMXG00000014510	exosc10	100	68.496	ENSSDUG00000006646	exosc10	99	71.961	Seriola_dumerili
ENSAMXG00000014510	exosc10	100	68.022	ENSSLDG00000025554	exosc10	100	72.742	Seriola_lalandi_dorsalis
ENSAMXG00000014510	exosc10	81	49.324	ENSSARG00000013171	EXOSC10	99	49.324	Sorex_araneus
ENSAMXG00000014510	exosc10	95	59.450	ENSSPUG00000006844	EXOSC10	98	67.517	Sphenodon_punctatus
ENSAMXG00000014510	exosc10	99	69.324	ENSSPAG00000007053	exosc10	99	69.435	Stegastes_partitus
ENSAMXG00000014510	exosc10	90	58.675	ENSSSCG00000003412	EXOSC10	100	58.675	Sus_scrofa
ENSAMXG00000014510	exosc10	93	57.193	ENSTGUG00000002231	EXOSC10	97	57.193	Taeniopygia_guttata
ENSAMXG00000014510	exosc10	99	65.451	ENSTRUG00000012484	exosc10	99	65.615	Takifugu_rubripes
ENSAMXG00000014510	exosc10	97	68.166	ENSTNIG00000015181	exosc10	100	68.166	Tetraodon_nigroviridis
ENSAMXG00000014510	exosc10	71	71.818	ENSTBEG00000017471	-	69	71.818	Tupaia_belangeri
ENSAMXG00000014510	exosc10	100	58.606	ENSTTRG00000001320	EXOSC10	100	58.606	Tursiops_truncatus
ENSAMXG00000014510	exosc10	95	59.170	ENSUAMG00000014404	EXOSC10	97	59.170	Ursus_americanus
ENSAMXG00000014510	exosc10	98	57.063	ENSUMAG00000023413	EXOSC10	99	63.741	Ursus_maritimus
ENSAMXG00000014510	exosc10	60	70.826	ENSVPAG00000004629	EXOSC10	62	70.826	Vicugna_pacos
ENSAMXG00000014510	exosc10	90	58.363	ENSVVUG00000027116	EXOSC10	100	58.363	Vulpes_vulpes
ENSAMXG00000014510	exosc10	97	54.799	ENSXETG00000006318	exosc10	99	54.799	Xenopus_tropicalis
ENSAMXG00000014510	exosc10	97	66.404	ENSXCOG00000004665	exosc10	97	66.667	Xiphophorus_couchianus
ENSAMXG00000014510	exosc10	100	65.862	ENSXMAG00000011246	exosc10	99	72.800	Xiphophorus_maculatus