EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014527 (Gene tree)
Gene ID: 103030345
Gene Symbol: slbp
Alias: cb157|sb:cb157|si:dkey-102m7.2
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4319 bases
Position: chr24:18176398-18180716
Accession: 103030345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000014954	SLBP_RNA_bind	PF15247.6	5.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000014954	-	1801	XM_007228445	ENSAMXP00000014954	272 (aa)	XP_007228507	W5L542

Gene Model

Click here to download ENSAMXG00000014527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014527	slbp	90	58.607	ENSG00000163950	SLBP	81	61.463	Homo_sapiens
ENSAMXG00000014527	slbp	99	60.000	ENSAPOG00000004953	slbp	98	60.000	Acanthochromis_polyacanthus
ENSAMXG00000014527	slbp	58	70.440	ENSAMEG00000016915	SLBP	74	69.136	Ailuropoda_melanoleuca
ENSAMXG00000014527	slbp	93	58.621	ENSACIG00000022308	slbp	97	58.238	Amphilophus_citrinellus
ENSAMXG00000014527	slbp	99	59.286	ENSAOCG00000024545	slbp	98	59.286	Amphiprion_ocellaris
ENSAMXG00000014527	slbp	99	59.286	ENSAPEG00000017629	slbp	98	59.286	Amphiprion_percula
ENSAMXG00000014527	slbp	99	58.304	ENSATEG00000016358	slbp	98	58.007	Anabas_testudineus
ENSAMXG00000014527	slbp	75	57.488	ENSAPLG00000015989	-	89	61.836	Anas_platyrhynchos
ENSAMXG00000014527	slbp	90	57.371	ENSANAG00000034769	SLBP	81	61.463	Aotus_nancymaae
ENSAMXG00000014527	slbp	100	56.028	ENSACLG00000007036	-	100	56.028	Astatotilapia_calliptera
ENSAMXG00000014527	slbp	80	60.619	ENSBTAG00000001328	SLBP	79	60.177	Bos_taurus
ENSAMXG00000014527	slbp	90	57.787	ENSCJAG00000001790	SLBP	83	55.378	Callithrix_jacchus
ENSAMXG00000014527	slbp	74	63.682	ENSCAFG00000015016	SLBP	71	63.682	Canis_familiaris
ENSAMXG00000014527	slbp	74	63.682	ENSCAFG00020012334	SLBP	71	63.682	Canis_lupus_dingo
ENSAMXG00000014527	slbp	80	59.641	ENSCHIG00000019364	SLBP	79	59.193	Capra_hircus
ENSAMXG00000014527	slbp	79	60.000	ENSTSYG00000000376	SLBP	72	69.231	Carlito_syrichta
ENSAMXG00000014527	slbp	62	60.355	ENSCAPG00000016340	SLBP	84	61.818	Cavia_aperea
ENSAMXG00000014527	slbp	77	60.190	ENSCPOG00000000031	SLBP	83	55.645	Cavia_porcellus
ENSAMXG00000014527	slbp	90	58.607	ENSCATG00000029173	SLBP	81	60.000	Cercocebus_atys
ENSAMXG00000014527	slbp	60	69.939	ENSCLAG00000008157	SLBP	84	56.148	Chinchilla_lanigera
ENSAMXG00000014527	slbp	90	42.460	ENSCSAG00000015628	SLBP	83	44.444	Chlorocebus_sabaeus
ENSAMXG00000014527	slbp	90	57.143	ENSCPBG00000000746	SLBP	91	54.104	Chrysemys_picta_bellii
ENSAMXG00000014527	slbp	75	61.765	ENSCANG00000041008	SLBP	89	61.275	Colobus_angolensis_palliatus
ENSAMXG00000014527	slbp	78	62.441	ENSCGRG00001012991	-	87	55.777	Cricetulus_griseus_chok1gshd
ENSAMXG00000014527	slbp	77	63.333	ENSCGRG00001009760	-	84	56.452	Cricetulus_griseus_chok1gshd
ENSAMXG00000014527	slbp	77	63.333	ENSCGRG00000004506	Slbp	84	56.452	Cricetulus_griseus_crigri
ENSAMXG00000014527	slbp	95	57.414	ENSCSEG00000020337	-	96	56.506	Cynoglossus_semilaevis
ENSAMXG00000014527	slbp	93	56.274	ENSCVAG00000019592	-	94	55.344	Cyprinodon_variegatus
ENSAMXG00000014527	slbp	100	63.273	ENSDARG00000100558	slbp	90	63.273	Danio_rerio
ENSAMXG00000014527	slbp	74	60.294	ENSDNOG00000047539	SLBP	73	62.745	Dasypus_novemcinctus
ENSAMXG00000014527	slbp	59	63.975	ENSDORG00000003028	Slbp	92	65.563	Dipodomys_ordii
ENSAMXG00000014527	slbp	74	57.426	ENSETEG00000004641	SLBP	86	57.073	Echinops_telfairi
ENSAMXG00000014527	slbp	50	72.263	ENSEASG00005022714	SLBP	70	72.263	Equus_asinus_asinus
ENSAMXG00000014527	slbp	70	65.969	ENSECAG00000011689	SLBP	60	65.969	Equus_caballus
ENSAMXG00000014527	slbp	97	62.094	ENSELUG00000012854	slbp	97	62.455	Esox_lucius
ENSAMXG00000014527	slbp	61	70.909	ENSFCAG00000000169	SLBP	71	68.824	Felis_catus
ENSAMXG00000014527	slbp	96	55.303	ENSFALG00000010003	-	91	55.303	Ficedula_albicollis
ENSAMXG00000014527	slbp	61	69.697	ENSFDAG00000007592	SLBP	76	64.179	Fukomys_damarensis
ENSAMXG00000014527	slbp	92	58.140	ENSFHEG00000007497	slbp	94	56.923	Fundulus_heteroclitus
ENSAMXG00000014527	slbp	55	71.895	ENSGMOG00000015352	slbp	97	72.549	Gadus_morhua
ENSAMXG00000014527	slbp	89	57.613	ENSGALG00000015712	SLBP	84	57.613	Gallus_gallus
ENSAMXG00000014527	slbp	98	55.000	ENSGAFG00000019577	slbp	99	56.767	Gambusia_affinis
ENSAMXG00000014527	slbp	92	57.708	ENSGACG00000019596	slbp	84	65.238	Gasterosteus_aculeatus
ENSAMXG00000014527	slbp	81	60.455	ENSGAGG00000012096	SLBP	88	60.455	Gopherus_agassizii
ENSAMXG00000014527	slbp	90	58.607	ENSGGOG00000003167	SLBP	81	61.463	Gorilla_gorilla
ENSAMXG00000014527	slbp	100	56.028	ENSHBUG00000003338	-	100	56.028	Haplochromis_burtoni
ENSAMXG00000014527	slbp	60	60.123	ENSHGLG00000008313	-	70	54.500	Heterocephalus_glaber_female
ENSAMXG00000014527	slbp	60	63.804	ENSHGLG00000010461	-	72	54.872	Heterocephalus_glaber_female
ENSAMXG00000014527	slbp	52	69.718	ENSHGLG00000005955	-	90	56.021	Heterocephalus_glaber_female
ENSAMXG00000014527	slbp	60	69.939	ENSHGLG00100014018	-	91	64.398	Heterocephalus_glaber_male
ENSAMXG00000014527	slbp	60	61.350	ENSHGLG00100010510	-	70	55.500	Heterocephalus_glaber_male
ENSAMXG00000014527	slbp	60	63.804	ENSHGLG00100014906	-	72	54.872	Heterocephalus_glaber_male
ENSAMXG00000014527	slbp	93	59.302	ENSHCOG00000013425	slbp	92	59.302	Hippocampus_comes
ENSAMXG00000014527	slbp	91	68.826	ENSIPUG00000016780	slbp	92	68.826	Ictalurus_punctatus
ENSAMXG00000014527	slbp	61	70.909	ENSSTOG00000003262	SLBP	86	55.118	Ictidomys_tridecemlineatus
ENSAMXG00000014527	slbp	76	63.592	ENSJJAG00000020549	-	83	56.148	Jaculus_jaculus
ENSAMXG00000014527	slbp	90	58.607	ENSJJAG00000002394	-	82	56.557	Jaculus_jaculus
ENSAMXG00000014527	slbp	94	56.877	ENSKMAG00000008187	slbp	94	56.877	Kryptolebias_marmoratus
ENSAMXG00000014527	slbp	99	58.545	ENSLBEG00000024709	slbp	98	58.545	Labrus_bergylta
ENSAMXG00000014527	slbp	95	54.380	ENSLACG00000014623	SLBP	86	56.574	Latimeria_chalumnae
ENSAMXG00000014527	slbp	96	62.593	ENSLOCG00000011027	slbp	89	62.593	Lepisosteus_oculatus
ENSAMXG00000014527	slbp	74	64.000	ENSLAFG00000012933	SLBP	83	62.562	Loxodonta_africana
ENSAMXG00000014527	slbp	90	59.426	ENSMFAG00000030130	SLBP	72	56.967	Macaca_fascicularis
ENSAMXG00000014527	slbp	94	55.849	ENSMMUG00000032303	SLBP	85	61.463	Macaca_mulatta
ENSAMXG00000014527	slbp	53	58.278	ENSMNEG00000008082	SLBP	63	56.291	Macaca_nemestrina
ENSAMXG00000014527	slbp	75	62.927	ENSMLEG00000024639	SLBP	77	62.439	Mandrillus_leucophaeus
ENSAMXG00000014527	slbp	99	55.714	ENSMAMG00000001046	-	98	56.228	Mastacembelus_armatus
ENSAMXG00000014527	slbp	100	56.028	ENSMZEG00005017261	-	100	56.028	Maylandia_zebra
ENSAMXG00000014527	slbp	75	61.275	ENSMGAG00000013085	SLBP	89	61.275	Meleagris_gallopavo
ENSAMXG00000014527	slbp	77	63.333	ENSMAUG00000009490	Slbp	84	56.452	Mesocricetus_auratus
ENSAMXG00000014527	slbp	79	60.000	ENSMICG00000014244	SLBP	72	69.231	Microcebus_murinus
ENSAMXG00000014527	slbp	77	63.158	ENSMOCG00000015826	Slbp	86	65.969	Microtus_ochrogaster
ENSAMXG00000014527	slbp	91	57.540	ENSMMOG00000010181	slbp	92	57.540	Mola_mola
ENSAMXG00000014527	slbp	74	60.099	ENSMODG00000004304	SLBP	76	62.562	Monodelphis_domestica
ENSAMXG00000014527	slbp	97	57.040	ENSMALG00000013883	-	72	56.228	Monopterus_albus
ENSAMXG00000014527	slbp	76	64.423	MGP_CAROLIEiJ_G0027117	Slbp	83	66.321	Mus_caroli
ENSAMXG00000014527	slbp	77	63.507	ENSMUSG00000004642	Slbp	84	66.321	Mus_musculus
ENSAMXG00000014527	slbp	77	63.507	MGP_PahariEiJ_G0016901	Slbp	83	66.321	Mus_pahari
ENSAMXG00000014527	slbp	77	63.507	MGP_SPRETEiJ_G0028113	Slbp	84	66.321	Mus_spretus
ENSAMXG00000014527	slbp	60	67.284	ENSMLUG00000004425	SLBP	68	67.901	Myotis_lucifugus
ENSAMXG00000014527	slbp	76	62.319	ENSNGAG00000020799	Slbp	83	55.918	Nannospalax_galili
ENSAMXG00000014527	slbp	89	57.143	ENSNBRG00000006044	-	87	60.173	Neolamprologus_brichardi
ENSAMXG00000014527	slbp	90	56.972	ENSNLEG00000000048	SLBP	81	61.463	Nomascus_leucogenys
ENSAMXG00000014527	slbp	58	70.253	ENSMEUG00000002501	SLBP	89	69.565	Notamacropus_eugenii
ENSAMXG00000014527	slbp	63	67.836	ENSODEG00000012641	SLBP	72	63.682	Octodon_degus
ENSAMXG00000014527	slbp	100	55.674	ENSONIG00000017469	-	100	55.319	Oreochromis_niloticus
ENSAMXG00000014527	slbp	75	62.927	ENSOANG00000014243	SLBP	69	72.222	Ornithorhynchus_anatinus
ENSAMXG00000014527	slbp	97	55.431	ENSORLG00000024887	-	95	55.431	Oryzias_latipes
ENSAMXG00000014527	slbp	96	54.753	ENSORLG00020007798	slbp	94	54.753	Oryzias_latipes_hni
ENSAMXG00000014527	slbp	97	55.056	ENSORLG00015016656	slbp	95	55.056	Oryzias_latipes_hsok
ENSAMXG00000014527	slbp	90	57.028	ENSOMEG00000010818	slbp	95	55.056	Oryzias_melastigma
ENSAMXG00000014527	slbp	76	62.019	ENSOGAG00000009750	SLBP	71	65.657	Otolemur_garnettii
ENSAMXG00000014527	slbp	60	70.988	ENSOARG00000016090	SLBP	74	70.370	Ovis_aries
ENSAMXG00000014527	slbp	90	58.607	ENSPPAG00000033300	SLBP	81	61.463	Pan_paniscus
ENSAMXG00000014527	slbp	61	70.303	ENSPPRG00000016897	SLBP	77	64.000	Panthera_pardus
ENSAMXG00000014527	slbp	50	72.993	ENSPTIG00000015057	SLBP	70	72.993	Panthera_tigris_altaica
ENSAMXG00000014527	slbp	90	58.537	ENSPTRG00000015832	SLBP	81	61.463	Pan_troglodytes
ENSAMXG00000014527	slbp	88	57.143	ENSPANG00000004932	SLBP	81	60.000	Papio_anubis
ENSAMXG00000014527	slbp	92	65.354	ENSPKIG00000006183	slbp	88	63.922	Paramormyrops_kingsleyae
ENSAMXG00000014527	slbp	88	55.785	ENSPMGG00000017684	-	97	58.621	Periophthalmus_magnuspinnatus
ENSAMXG00000014527	slbp	77	63.333	ENSPEMG00000018369	Slbp	83	57.143	Peromyscus_maniculatus_bairdii
ENSAMXG00000014527	slbp	78	56.054	ENSPCIG00000013575	SLBP	64	58.296	Phascolarctos_cinereus
ENSAMXG00000014527	slbp	98	55.714	ENSPFOG00000000462	slbp	99	55.714	Poecilia_formosa
ENSAMXG00000014527	slbp	98	55.714	ENSPLAG00000008300	slbp	99	55.714	Poecilia_latipinna
ENSAMXG00000014527	slbp	98	55.714	ENSPMEG00000020807	slbp	99	55.714	Poecilia_mexicana
ENSAMXG00000014527	slbp	98	55.714	ENSPREG00000004561	slbp	99	55.714	Poecilia_reticulata
ENSAMXG00000014527	slbp	90	59.426	ENSPPYG00000014529	SLBP	82	56.967	Pongo_abelii
ENSAMXG00000014527	slbp	79	60.000	ENSPCOG00000017399	SLBP	72	69.231	Propithecus_coquereli
ENSAMXG00000014527	slbp	90	52.869	ENSPVAG00000002807	SLBP	69	58.209	Pteropus_vampyrus
ENSAMXG00000014527	slbp	100	56.028	ENSPNYG00000005451	-	100	56.028	Pundamilia_nyererei
ENSAMXG00000014527	slbp	100	78.545	ENSPNAG00000018503	slbp	100	78.182	Pygocentrus_nattereri
ENSAMXG00000014527	slbp	77	63.507	ENSRNOG00000037162	Slbp	83	57.317	Rattus_norvegicus
ENSAMXG00000014527	slbp	90	58.607	ENSRBIG00000039159	SLBP	81	60.000	Rhinopithecus_bieti
ENSAMXG00000014527	slbp	90	58.607	ENSRROG00000030081	SLBP	84	56.967	Rhinopithecus_roxellana
ENSAMXG00000014527	slbp	66	60.556	ENSSBOG00000033897	SLBP	71	72.388	Saimiri_boliviensis_boliviensis
ENSAMXG00000014527	slbp	74	59.242	ENSSHAG00000013939	SLBP	70	61.611	Sarcophilus_harrisii
ENSAMXG00000014527	slbp	92	62.698	ENSSFOG00015019429	slbp	90	62.302	Scleropages_formosus
ENSAMXG00000014527	slbp	96	56.679	ENSSMAG00000016028	-	95	56.679	Scophthalmus_maximus
ENSAMXG00000014527	slbp	100	57.651	ENSSDUG00000000855	-	100	57.651	Seriola_dumerili
ENSAMXG00000014527	slbp	53	65.563	ENSSLDG00000022893	-	86	65.563	Seriola_lalandi_dorsalis
ENSAMXG00000014527	slbp	91	40.784	ENSSLDG00000007554	-	80	41.176	Seriola_lalandi_dorsalis
ENSAMXG00000014527	slbp	92	54.086	ENSSPUG00000016007	SLBP	90	54.086	Sphenodon_punctatus
ENSAMXG00000014527	slbp	99	58.484	ENSSPAG00000004021	slbp	96	61.111	Stegastes_partitus
ENSAMXG00000014527	slbp	74	64.677	ENSSSCG00000008676	SLBP	83	56.967	Sus_scrofa
ENSAMXG00000014527	slbp	89	56.790	ENSTGUG00000010626	-	88	56.790	Taeniopygia_guttata
ENSAMXG00000014527	slbp	92	59.766	ENSTRUG00000000688	slbp	91	59.766	Takifugu_rubripes
ENSAMXG00000014527	slbp	93	54.510	ENSTNIG00000000484	-	99	54.510	Tetraodon_nigroviridis
ENSAMXG00000014527	slbp	51	77.778	ENSTBEG00000004085	SLBP	51	77.778	Tupaia_belangeri
ENSAMXG00000014527	slbp	58	71.069	ENSTTRG00000010901	-	74	70.186	Tursiops_truncatus
ENSAMXG00000014527	slbp	58	66.038	ENSTTRG00000004010	-	89	65.217	Tursiops_truncatus
ENSAMXG00000014527	slbp	73	64.141	ENSUAMG00000012990	SLBP	70	63.184	Ursus_americanus
ENSAMXG00000014527	slbp	74	63.184	ENSVVUG00000015578	-	71	63.184	Vulpes_vulpes
ENSAMXG00000014527	slbp	93	53.516	ENSXETG00000003876	slbp	89	52.107	Xenopus_tropicalis
ENSAMXG00000014527	slbp	93	57.414	ENSXCOG00000008275	slbp	99	56.716	Xiphophorus_couchianus
ENSAMXG00000014527	slbp	98	55.357	ENSXMAG00000001331	-	98	55.357	Xiphophorus_maculatus