EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014708 (Gene tree)
Gene ID: 103041587
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 23436 bases
Position: chrAPWO02000052.1:151260-174695
Accession: 103041587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015139	efThoc1	PF11957.8	4.3e-129	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000015140	-	1842	XM_022665525	ENSAMXP00000015139	613 (aa)	XP_022521246	W5L5M7

Gene Model

Click here to download ENSAMXG00000014708's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014708	thoc1	97	71.474	ENSG00000079134	THOC1	99	82.418	Homo_sapiens
ENSAMXG00000014708	thoc1	97	71.498	ENSAMEG00000006645	THOC1	92	71.498	Ailuropoda_melanoleuca
ENSAMXG00000014708	thoc1	97	79.119	ENSACIG00000019392	thoc1	95	79.805	Amphilophus_citrinellus
ENSAMXG00000014708	thoc1	98	73.120	ENSAOCG00000008391	thoc1	94	73.802	Amphiprion_ocellaris
ENSAMXG00000014708	thoc1	98	77.193	ENSAPEG00000001093	thoc1	94	77.866	Amphiprion_percula
ENSAMXG00000014708	thoc1	98	76.396	ENSATEG00000004783	thoc1	94	77.070	Anabas_testudineus
ENSAMXG00000014708	thoc1	97	70.880	ENSAPLG00000016149	THOC1	93	71.200	Anas_platyrhynchos
ENSAMXG00000014708	thoc1	97	71.154	ENSACAG00000008307	THOC1	91	71.154	Anolis_carolinensis
ENSAMXG00000014708	thoc1	97	70.840	ENSANAG00000033200	THOC1	93	70.840	Aotus_nancymaae
ENSAMXG00000014708	thoc1	98	76.236	ENSACLG00000016836	thoc1	94	76.911	Astatotilapia_calliptera
ENSAMXG00000014708	thoc1	97	71.337	ENSBTAG00000019215	THOC1	93	71.337	Bos_taurus
ENSAMXG00000014708	thoc1	69	34.091	WBGene00020172	thoc-1	68	33.833	Caenorhabditis_elegans
ENSAMXG00000014708	thoc1	97	71.635	ENSCJAG00000020450	THOC1	93	71.635	Callithrix_jacchus
ENSAMXG00000014708	thoc1	97	71.498	ENSCAFG00000018324	THOC1	93	71.498	Canis_familiaris
ENSAMXG00000014708	thoc1	97	71.498	ENSCAFG00020017894	THOC1	93	71.498	Canis_lupus_dingo
ENSAMXG00000014708	thoc1	97	71.337	ENSCHIG00000015399	THOC1	95	71.337	Capra_hircus
ENSAMXG00000014708	thoc1	97	71.498	ENSTSYG00000010585	THOC1	92	71.498	Carlito_syrichta
ENSAMXG00000014708	thoc1	97	53.333	ENSCAPG00000016270	THOC1	93	53.333	Cavia_aperea
ENSAMXG00000014708	thoc1	97	70.692	ENSCPOG00000000959	THOC1	93	70.692	Cavia_porcellus
ENSAMXG00000014708	thoc1	97	71.635	ENSCCAG00000025766	THOC1	93	71.635	Cebus_capucinus
ENSAMXG00000014708	thoc1	97	69.231	ENSCATG00000028180	THOC1	93	69.231	Cercocebus_atys
ENSAMXG00000014708	thoc1	97	71.014	ENSCLAG00000009117	THOC1	95	71.014	Chinchilla_lanigera
ENSAMXG00000014708	thoc1	97	71.635	ENSCSAG00000017631	THOC1	93	71.635	Chlorocebus_sabaeus
ENSAMXG00000014708	thoc1	81	72.052	ENSCHOG00000010609	THOC1	76	69.710	Choloepus_hoffmanni
ENSAMXG00000014708	thoc1	97	71.360	ENSCPBG00000027558	THOC1	93	71.680	Chrysemys_picta_bellii
ENSAMXG00000014708	thoc1	70	47.505	ENSCING00000007663	-	91	47.505	Ciona_intestinalis
ENSAMXG00000014708	thoc1	96	46.288	ENSCSAVG00000010649	-	99	46.288	Ciona_savignyi
ENSAMXG00000014708	thoc1	97	71.635	ENSCANG00000034265	THOC1	93	71.635	Colobus_angolensis_palliatus
ENSAMXG00000014708	thoc1	97	71.659	ENSCGRG00001016464	Thoc1	92	71.659	Cricetulus_griseus_chok1gshd
ENSAMXG00000014708	thoc1	94	58.834	ENSCGRG00000003390	-	97	58.834	Cricetulus_griseus_crigri
ENSAMXG00000014708	thoc1	97	71.659	ENSCGRG00000010269	-	95	71.659	Cricetulus_griseus_crigri
ENSAMXG00000014708	thoc1	97	75.040	ENSCSEG00000012486	thoc1	99	75.000	Cynoglossus_semilaevis
ENSAMXG00000014708	thoc1	98	74.841	ENSCVAG00000020600	thoc1	94	75.159	Cyprinodon_variegatus
ENSAMXG00000014708	thoc1	97	81.120	ENSDARG00000088246	thoc1	94	81.120	Danio_rerio
ENSAMXG00000014708	thoc1	97	71.498	ENSDNOG00000019217	THOC1	93	71.543	Dasypus_novemcinctus
ENSAMXG00000014708	thoc1	97	67.150	ENSDORG00000008060	Thoc1	94	67.150	Dipodomys_ordii
ENSAMXG00000014708	thoc1	95	36.378	FBgn0037382	Hpr1	86	36.378	Drosophila_melanogaster
ENSAMXG00000014708	thoc1	76	63.723	ENSETEG00000004165	THOC1	81	63.723	Echinops_telfairi
ENSAMXG00000014708	thoc1	95	59.477	ENSEBUG00000005998	thoc1	98	60.621	Eptatretus_burgeri
ENSAMXG00000014708	thoc1	97	71.498	ENSEASG00005002549	THOC1	89	71.498	Equus_asinus_asinus
ENSAMXG00000014708	thoc1	97	71.659	ENSECAG00000009267	THOC1	83	71.659	Equus_caballus
ENSAMXG00000014708	thoc1	67	85.185	ENSEEUG00000012214	-	67	85.185	Erinaceus_europaeus
ENSAMXG00000014708	thoc1	98	78.730	ENSELUG00000023277	thoc1	94	78.730	Esox_lucius
ENSAMXG00000014708	thoc1	97	71.659	ENSFCAG00000022454	THOC1	80	71.659	Felis_catus
ENSAMXG00000014708	thoc1	97	69.952	ENSFALG00000006205	THOC1	96	70.270	Ficedula_albicollis
ENSAMXG00000014708	thoc1	97	71.014	ENSFDAG00000006842	THOC1	94	71.014	Fukomys_damarensis
ENSAMXG00000014708	thoc1	98	75.637	ENSFHEG00000008841	thoc1	94	75.955	Fundulus_heteroclitus
ENSAMXG00000014708	thoc1	97	75.719	ENSGMOG00000011486	thoc1	94	76.038	Gadus_morhua
ENSAMXG00000014708	thoc1	97	70.720	ENSGALG00000014915	THOC1	93	70.142	Gallus_gallus
ENSAMXG00000014708	thoc1	98	74.482	ENSGAFG00000021464	thoc1	94	75.159	Gambusia_affinis
ENSAMXG00000014708	thoc1	97	76.122	ENSGACG00000017361	thoc1	94	76.800	Gasterosteus_aculeatus
ENSAMXG00000014708	thoc1	97	72.026	ENSGAGG00000021230	-	91	72.000	Gopherus_agassizii
ENSAMXG00000014708	thoc1	97	71.314	ENSGGOG00000003013	THOC1	93	71.314	Gorilla_gorilla
ENSAMXG00000014708	thoc1	98	76.555	ENSHBUG00000009096	thoc1	94	77.229	Haplochromis_burtoni
ENSAMXG00000014708	thoc1	97	71.337	ENSHGLG00000003712	-	93	71.337	Heterocephalus_glaber_female
ENSAMXG00000014708	thoc1	71	66.497	ENSHGLG00000009264	-	98	66.497	Heterocephalus_glaber_female
ENSAMXG00000014708	thoc1	70	67.742	ENSHGLG00100002225	-	98	67.742	Heterocephalus_glaber_male
ENSAMXG00000014708	thoc1	97	71.337	ENSHGLG00100003570	THOC1	93	71.337	Heterocephalus_glaber_male
ENSAMXG00000014708	thoc1	97	78.020	ENSIPUG00000005306	thoc1	95	78.020	Ictalurus_punctatus
ENSAMXG00000014708	thoc1	99	69.640	ENSSTOG00000006484	THOC1	95	69.640	Ictidomys_tridecemlineatus
ENSAMXG00000014708	thoc1	98	74.801	ENSKMAG00000003904	thoc1	94	75.478	Kryptolebias_marmoratus
ENSAMXG00000014708	thoc1	98	74.882	ENSLBEG00000020372	thoc1	94	75.549	Labrus_bergylta
ENSAMXG00000014708	thoc1	97	70.048	ENSLACG00000014869	THOC1	93	70.048	Latimeria_chalumnae
ENSAMXG00000014708	thoc1	97	77.352	ENSLOCG00000002097	thoc1	94	77.352	Lepisosteus_oculatus
ENSAMXG00000014708	thoc1	97	71.337	ENSLAFG00000009585	THOC1	93	71.337	Loxodonta_africana
ENSAMXG00000014708	thoc1	97	71.635	ENSMFAG00000041520	THOC1	93	71.635	Macaca_fascicularis
ENSAMXG00000014708	thoc1	97	71.635	ENSMMUG00000004662	THOC1	93	71.635	Macaca_mulatta
ENSAMXG00000014708	thoc1	97	71.635	ENSMNEG00000040177	THOC1	93	71.635	Macaca_nemestrina
ENSAMXG00000014708	thoc1	97	71.635	ENSMLEG00000034201	THOC1	93	71.635	Mandrillus_leucophaeus
ENSAMXG00000014708	thoc1	98	75.879	ENSMAMG00000016747	thoc1	99	76.555	Mastacembelus_armatus
ENSAMXG00000014708	thoc1	98	76.236	ENSMZEG00005024609	thoc1	94	76.911	Maylandia_zebra
ENSAMXG00000014708	thoc1	97	70.223	ENSMGAG00000009811	THOC1	96	70.541	Meleagris_gallopavo
ENSAMXG00000014708	thoc1	97	71.176	ENSMAUG00000010272	Thoc1	92	71.176	Mesocricetus_auratus
ENSAMXG00000014708	thoc1	97	71.659	ENSMICG00000027200	THOC1	93	71.750	Microcebus_murinus
ENSAMXG00000014708	thoc1	96	64.803	ENSMOCG00000014924	-	90	64.803	Microtus_ochrogaster
ENSAMXG00000014708	thoc1	97	70.531	ENSMOCG00000014536	-	80	70.531	Microtus_ochrogaster
ENSAMXG00000014708	thoc1	96	77.851	ENSMMOG00000011772	thoc1	100	78.548	Mola_mola
ENSAMXG00000014708	thoc1	97	70.570	ENSMODG00000021482	THOC1	93	70.886	Monodelphis_domestica
ENSAMXG00000014708	thoc1	98	77.671	ENSMALG00000021872	thoc1	99	75.680	Monopterus_albus
ENSAMXG00000014708	thoc1	97	71.176	MGP_CAROLIEiJ_G0021989	Thoc1	93	71.176	Mus_caroli
ENSAMXG00000014708	thoc1	97	71.014	ENSMUSG00000024287	Thoc1	93	71.014	Mus_musculus
ENSAMXG00000014708	thoc1	97	71.014	MGP_PahariEiJ_G0018726	Thoc1	93	71.014	Mus_pahari
ENSAMXG00000014708	thoc1	97	71.014	MGP_SPRETEiJ_G0022905	Thoc1	93	71.014	Mus_spretus
ENSAMXG00000014708	thoc1	97	71.498	ENSMPUG00000005448	THOC1	93	71.498	Mustela_putorius_furo
ENSAMXG00000014708	thoc1	55	61.538	ENSMLUG00000024912	-	89	61.538	Myotis_lucifugus
ENSAMXG00000014708	thoc1	87	65.187	ENSMLUG00000027965	-	92	65.364	Myotis_lucifugus
ENSAMXG00000014708	thoc1	97	71.383	ENSMLUG00000004090	-	93	71.383	Myotis_lucifugus
ENSAMXG00000014708	thoc1	96	57.749	ENSNGAG00000008061	-	93	57.749	Nannospalax_galili
ENSAMXG00000014708	thoc1	97	71.659	ENSNGAG00000001401	-	93	71.659	Nannospalax_galili
ENSAMXG00000014708	thoc1	98	77.419	ENSNBRG00000005991	thoc1	94	78.100	Neolamprologus_brichardi
ENSAMXG00000014708	thoc1	97	71.635	ENSNLEG00000006835	THOC1	93	71.635	Nomascus_leucogenys
ENSAMXG00000014708	thoc1	79	73.407	ENSMEUG00000009756	THOC1	88	73.407	Notamacropus_eugenii
ENSAMXG00000014708	thoc1	97	58.132	ENSOPRG00000001108	THOC1	92	58.132	Ochotona_princeps
ENSAMXG00000014708	thoc1	97	65.862	ENSODEG00000006623	THOC1	92	65.862	Octodon_degus
ENSAMXG00000014708	thoc1	98	76.236	ENSONIG00000009440	thoc1	93	76.800	Oreochromis_niloticus
ENSAMXG00000014708	thoc1	97	71.498	ENSOCUG00000011601	THOC1	93	71.498	Oryctolagus_cuniculus
ENSAMXG00000014708	thoc1	98	76.688	ENSORLG00000017629	thoc1	94	77.010	Oryzias_latipes
ENSAMXG00000014708	thoc1	98	76.274	ENSORLG00020007567	thoc1	94	76.592	Oryzias_latipes_hni
ENSAMXG00000014708	thoc1	99	75.900	ENSORLG00015007356	thoc1	99	76.213	Oryzias_latipes_hsok
ENSAMXG00000014708	thoc1	98	75.159	ENSOMEG00000008200	thoc1	94	76.115	Oryzias_melastigma
ENSAMXG00000014708	thoc1	97	68.599	ENSOGAG00000000470	THOC1	92	68.599	Otolemur_garnettii
ENSAMXG00000014708	thoc1	97	71.337	ENSOARG00000009238	THOC1	92	71.337	Ovis_aries
ENSAMXG00000014708	thoc1	97	71.635	ENSPPAG00000031812	THOC1	93	71.635	Pan_paniscus
ENSAMXG00000014708	thoc1	97	71.014	ENSPPRG00000023794	THOC1	93	71.014	Panthera_pardus
ENSAMXG00000014708	thoc1	97	71.014	ENSPTIG00000007469	THOC1	93	71.014	Panthera_tigris_altaica
ENSAMXG00000014708	thoc1	97	70.681	ENSPTRG00000009816	THOC1	93	70.681	Pan_troglodytes
ENSAMXG00000014708	thoc1	97	70.701	ENSPANG00000008665	THOC1	93	70.701	Papio_anubis
ENSAMXG00000014708	thoc1	98	76.789	ENSPKIG00000005906	thoc1	94	77.901	Paramormyrops_kingsleyae
ENSAMXG00000014708	thoc1	86	77.358	ENSPSIG00000007691	THOC1	97	77.736	Pelodiscus_sinensis
ENSAMXG00000014708	thoc1	98	76.948	ENSPMGG00000008279	thoc1	97	77.273	Periophthalmus_magnuspinnatus
ENSAMXG00000014708	thoc1	97	71.176	ENSPEMG00000021789	Thoc1	93	71.176	Peromyscus_maniculatus_bairdii
ENSAMXG00000014708	thoc1	79	74.187	ENSPCIG00000026942	THOC1	97	74.593	Phascolarctos_cinereus
ENSAMXG00000014708	thoc1	98	74.482	ENSPFOG00000011673	thoc1	94	75.159	Poecilia_formosa
ENSAMXG00000014708	thoc1	98	74.801	ENSPLAG00000019648	thoc1	94	75.478	Poecilia_latipinna
ENSAMXG00000014708	thoc1	98	74.641	ENSPMEG00000007083	thoc1	94	75.318	Poecilia_mexicana
ENSAMXG00000014708	thoc1	98	74.641	ENSPREG00000006719	thoc1	94	75.318	Poecilia_reticulata
ENSAMXG00000014708	thoc1	70	74.672	ENSPPYG00000009049	-	91	74.672	Pongo_abelii
ENSAMXG00000014708	thoc1	88	71.460	ENSPCAG00000005320	THOC1	85	71.460	Procavia_capensis
ENSAMXG00000014708	thoc1	97	71.195	ENSPCOG00000009234	THOC1	93	71.176	Propithecus_coquereli
ENSAMXG00000014708	thoc1	97	69.726	ENSPVAG00000004007	THOC1	92	69.726	Pteropus_vampyrus
ENSAMXG00000014708	thoc1	98	76.555	ENSPNYG00000019152	thoc1	94	77.229	Pundamilia_nyererei
ENSAMXG00000014708	thoc1	97	84.591	ENSPNAG00000023390	thoc1	94	84.591	Pygocentrus_nattereri
ENSAMXG00000014708	thoc1	93	50.346	ENSRNOG00000015332	Thoc1	91	50.346	Rattus_norvegicus
ENSAMXG00000014708	thoc1	97	70.840	ENSRBIG00000033738	THOC1	93	73.770	Rhinopithecus_bieti
ENSAMXG00000014708	thoc1	97	71.635	ENSRROG00000044988	THOC1	93	71.635	Rhinopithecus_roxellana
ENSAMXG00000014708	thoc1	97	71.474	ENSSBOG00000016556	THOC1	93	71.474	Saimiri_boliviensis_boliviensis
ENSAMXG00000014708	thoc1	97	71.680	ENSSHAG00000014829	THOC1	93	72.000	Sarcophilus_harrisii
ENSAMXG00000014708	thoc1	97	80.320	ENSSFOG00015021527	thoc1	94	80.320	Scleropages_formosus
ENSAMXG00000014708	thoc1	97	76.565	ENSSMAG00000018465	thoc1	95	77.244	Scophthalmus_maximus
ENSAMXG00000014708	thoc1	98	76.715	ENSSDUG00000016810	thoc1	94	77.389	Seriola_dumerili
ENSAMXG00000014708	thoc1	98	76.715	ENSSLDG00000015555	thoc1	94	77.389	Seriola_lalandi_dorsalis
ENSAMXG00000014708	thoc1	84	66.079	ENSSARG00000006910	THOC1	80	66.079	Sorex_araneus
ENSAMXG00000014708	thoc1	97	73.235	ENSSPUG00000007238	THOC1	93	73.563	Sphenodon_punctatus
ENSAMXG00000014708	thoc1	97	75.160	ENSSPAG00000018847	thoc1	93	75.840	Stegastes_partitus
ENSAMXG00000014708	thoc1	97	71.659	ENSSSCG00000025653	THOC1	87	71.659	Sus_scrofa
ENSAMXG00000014708	thoc1	97	70.720	ENSTGUG00000010204	THOC1	93	71.040	Taeniopygia_guttata
ENSAMXG00000014708	thoc1	98	75.196	ENSTRUG00000013518	thoc1	96	75.862	Takifugu_rubripes
ENSAMXG00000014708	thoc1	98	75.439	ENSTNIG00000008473	thoc1	94	76.115	Tetraodon_nigroviridis
ENSAMXG00000014708	thoc1	99	62.441	ENSTBEG00000016920	THOC1	95	62.441	Tupaia_belangeri
ENSAMXG00000014708	thoc1	97	68.679	ENSTTRG00000016664	THOC1	93	68.679	Tursiops_truncatus
ENSAMXG00000014708	thoc1	97	71.659	ENSUAMG00000002527	THOC1	94	71.659	Ursus_americanus
ENSAMXG00000014708	thoc1	97	71.659	ENSUMAG00000019693	THOC1	93	71.659	Ursus_maritimus
ENSAMXG00000014708	thoc1	68	66.327	ENSVPAG00000003726	-	64	66.327	Vicugna_pacos
ENSAMXG00000014708	thoc1	97	71.498	ENSVVUG00000004384	THOC1	93	71.498	Vulpes_vulpes
ENSAMXG00000014708	thoc1	97	69.010	ENSXETG00000003155	thoc1	91	69.010	Xenopus_tropicalis
ENSAMXG00000014708	thoc1	98	70.159	ENSXCOG00000016085	thoc1	90	70.840	Xiphophorus_couchianus
ENSAMXG00000014708	thoc1	98	74.641	ENSXMAG00000002353	thoc1	94	75.318	Xiphophorus_maculatus