EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000014895 (Gene tree)
Gene ID: 103022557
Gene Symbol: gars
Alias: metronome|mrn|si:dkey-276i5.1|wu:fb02f03
Full Name: glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 13764 bases
Position: chr3:23033273-23047036
Accession: 103022557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015331	HGTP_anticodon	PF03129.20	2.6e-21	1	1
ENSAMXP00000049638	HGTP_anticodon	PF03129.20	2.6e-21	1	1
ENSAMXP00000040176	HGTP_anticodon	PF03129.20	3.1e-21	1	1
ENSAMXP00000015331	tRNA-synt_2b	PF00587.25	6.3e-11	1	1
ENSAMXP00000049638	tRNA-synt_2b	PF00587.25	6.3e-11	1	1
ENSAMXP00000040176	tRNA-synt_2b	PF00587.25	8.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031003	-	3212	-	ENSAMXP00000049638	625 (aa)	-	-
ENSAMXT00000015331	-	3212	-	ENSAMXP00000015331	625 (aa)	-	W5L669
ENSAMXT00000040496	-	2109	XM_022682992	ENSAMXP00000040176	702 (aa)	XP_022538713	-

Gene Model

Click here to download ENSAMXG00000014895's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000014895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000014895	gars	96	86.432	ENSG00000106105	GARS	95	79.452	Homo_sapiens
ENSAMXG00000014895	gars	95	82.857	ENSAPOG00000020089	gars	99	75.735	Acanthochromis_polyacanthus
ENSAMXG00000014895	gars	96	90.452	ENSAPOG00000019999	gars	100	80.908	Acanthochromis_polyacanthus
ENSAMXG00000014895	gars	96	86.767	ENSAMEG00000006652	GARS	99	75.337	Ailuropoda_melanoleuca
ENSAMXG00000014895	gars	96	90.787	ENSACIG00000020744	gars	100	82.109	Amphilophus_citrinellus
ENSAMXG00000014895	gars	95	85.329	ENSACIG00000020797	gars	99	78.932	Amphilophus_citrinellus
ENSAMXG00000014895	gars	96	91.122	ENSAOCG00000009108	gars	100	81.308	Amphiprion_ocellaris
ENSAMXG00000014895	gars	82	86.275	ENSAOCG00000002479	gars	100	86.275	Amphiprion_ocellaris
ENSAMXG00000014895	gars	96	85.309	ENSAPEG00000018903	gars	99	79.434	Amphiprion_percula
ENSAMXG00000014895	gars	96	90.620	ENSAPEG00000018850	gars	100	80.908	Amphiprion_percula
ENSAMXG00000014895	gars	96	90.787	ENSATEG00000008784	gars	100	83.612	Anabas_testudineus
ENSAMXG00000014895	gars	63	87.374	ENSAPLG00000015638	-	100	78.017	Anas_platyrhynchos
ENSAMXG00000014895	gars	96	85.260	ENSACAG00000005601	GARS	100	78.134	Anolis_carolinensis
ENSAMXG00000014895	gars	96	86.935	ENSANAG00000022536	GARS	100	79.270	Aotus_nancymaae
ENSAMXG00000014895	gars	95	84.680	ENSACLG00000027158	gars	99	77.286	Astatotilapia_calliptera
ENSAMXG00000014895	gars	96	90.285	ENSACLG00000027174	gars	100	80.507	Astatotilapia_calliptera
ENSAMXG00000014895	gars	96	86.600	ENSBTAG00000018972	GARS	99	75.339	Bos_taurus
ENSAMXG00000014895	gars	94	56.706	WBGene00001744	gars-1	99	52.976	Caenorhabditis_elegans
ENSAMXG00000014895	gars	96	86.600	ENSCJAG00000008595	GARS	97	76.643	Callithrix_jacchus
ENSAMXG00000014895	gars	95	86.486	ENSCAFG00000003086	GARS	93	74.290	Canis_familiaris
ENSAMXG00000014895	gars	95	86.486	ENSCAFG00020004272	GARS	98	78.676	Canis_lupus_dingo
ENSAMXG00000014895	gars	96	86.432	ENSCHIG00000016912	GARS	97	86.432	Capra_hircus
ENSAMXG00000014895	gars	96	87.270	ENSTSYG00000008538	GARS	99	75.606	Carlito_syrichta
ENSAMXG00000014895	gars	90	73.566	ENSCAPG00000007526	GARS	99	64.620	Cavia_aperea
ENSAMXG00000014895	gars	96	85.595	ENSCPOG00000007547	GARS	97	75.382	Cavia_porcellus
ENSAMXG00000014895	gars	96	86.935	ENSCCAG00000011512	GARS	93	79.155	Cebus_capucinus
ENSAMXG00000014895	gars	96	86.767	ENSCATG00000036699	GARS	96	77.107	Cercocebus_atys
ENSAMXG00000014895	gars	96	86.935	ENSCLAG00000007985	GARS	96	79.155	Chinchilla_lanigera
ENSAMXG00000014895	gars	96	86.767	ENSCSAG00000014588	GARS	93	79.300	Chlorocebus_sabaeus
ENSAMXG00000014895	gars	96	77.387	ENSCHOG00000003253	GARS	99	65.194	Choloepus_hoffmanni
ENSAMXG00000014895	gars	96	85.930	ENSCPBG00000019482	GARS	92	79.254	Chrysemys_picta_bellii
ENSAMXG00000014895	gars	94	63.435	ENSCING00000008937	-	99	58.990	Ciona_intestinalis
ENSAMXG00000014895	gars	96	86.600	ENSCANG00000027727	GARS	96	76.718	Colobus_angolensis_palliatus
ENSAMXG00000014895	gars	96	86.767	ENSCGRG00001020450	Gars	99	75.310	Cricetulus_griseus_chok1gshd
ENSAMXG00000014895	gars	96	86.935	ENSCGRG00000008342	Gars	94	79.580	Cricetulus_griseus_crigri
ENSAMXG00000014895	gars	96	91.122	ENSCSEG00000017671	gars	100	80.533	Cynoglossus_semilaevis
ENSAMXG00000014895	gars	95	79.293	ENSCSEG00000017654	gars	98	72.566	Cynoglossus_semilaevis
ENSAMXG00000014895	gars	96	89.950	ENSCVAG00000007149	gars	100	79.920	Cyprinodon_variegatus
ENSAMXG00000014895	gars	96	93.802	ENSDARG00000059070	gars	100	86.522	Danio_rerio
ENSAMXG00000014895	gars	96	86.935	ENSDNOG00000046478	GARS	100	80.425	Dasypus_novemcinctus
ENSAMXG00000014895	gars	96	85.427	ENSDORG00000002672	Gars	99	76.999	Dipodomys_ordii
ENSAMXG00000014895	gars	95	59.628	FBgn0027088	GlyRS	99	56.296	Drosophila_melanogaster
ENSAMXG00000014895	gars	95	82.521	ENSETEG00000012196	GARS	92	82.521	Echinops_telfairi
ENSAMXG00000014895	gars	63	80.808	ENSEBUG00000002254	gars	89	70.833	Eptatretus_burgeri
ENSAMXG00000014895	gars	63	74.937	ENSEBUG00000002654	gars	87	66.253	Eptatretus_burgeri
ENSAMXG00000014895	gars	96	87.270	ENSEASG00005000388	GARS	99	75.774	Equus_asinus_asinus
ENSAMXG00000014895	gars	96	87.437	ENSECAG00000019373	GARS	99	75.908	Equus_caballus
ENSAMXG00000014895	gars	96	91.457	ENSELUG00000003692	gars	100	81.175	Esox_lucius
ENSAMXG00000014895	gars	96	86.935	ENSFCAG00000011415	GARS	83	76.816	Felis_catus
ENSAMXG00000014895	gars	96	85.092	ENSFALG00000006550	GARS	97	85.092	Ficedula_albicollis
ENSAMXG00000014895	gars	96	86.432	ENSFDAG00000014466	GARS	100	79.098	Fukomys_damarensis
ENSAMXG00000014895	gars	96	90.285	ENSFHEG00000013189	gars	100	80.319	Fundulus_heteroclitus
ENSAMXG00000014895	gars	96	87.270	ENSGMOG00000010728	gars	100	77.139	Gadus_morhua
ENSAMXG00000014895	gars	89	78.957	ENSGMOG00000008856	-	100	71.955	Gadus_morhua
ENSAMXG00000014895	gars	96	86.097	ENSGALG00000005694	GARS	100	78.978	Gallus_gallus
ENSAMXG00000014895	gars	96	90.620	ENSGAFG00000005228	gars	100	80.293	Gambusia_affinis
ENSAMXG00000014895	gars	96	89.280	ENSGACG00000003410	gars	100	78.238	Gasterosteus_aculeatus
ENSAMXG00000014895	gars	96	86.097	ENSGAGG00000017755	GARS	96	86.097	Gopherus_agassizii
ENSAMXG00000014895	gars	96	86.767	ENSGGOG00000004916	GARS	93	79.009	Gorilla_gorilla
ENSAMXG00000014895	gars	95	84.175	ENSHBUG00000000815	gars	99	76.696	Haplochromis_burtoni
ENSAMXG00000014895	gars	96	90.452	ENSHBUG00000016481	gars	100	80.774	Haplochromis_burtoni
ENSAMXG00000014895	gars	96	86.935	ENSHGLG00000016342	GARS	99	74.933	Heterocephalus_glaber_female
ENSAMXG00000014895	gars	96	85.930	ENSHGLG00100006787	GARS	99	76.643	Heterocephalus_glaber_male
ENSAMXG00000014895	gars	60	68.700	ENSHCOG00000005286	gars	96	70.083	Hippocampus_comes
ENSAMXG00000014895	gars	97	85.502	ENSHCOG00000005261	gars	100	80.263	Hippocampus_comes
ENSAMXG00000014895	gars	96	85.427	ENSIPUG00000011443	gars	100	80.355	Ictalurus_punctatus
ENSAMXG00000014895	gars	96	85.927	ENSSTOG00000015493	GARS	94	76.560	Ictidomys_tridecemlineatus
ENSAMXG00000014895	gars	96	86.432	ENSJJAG00000022474	Gars	99	79.009	Jaculus_jaculus
ENSAMXG00000014895	gars	96	90.620	ENSKMAG00000010428	gars	100	79.416	Kryptolebias_marmoratus
ENSAMXG00000014895	gars	95	85.666	ENSLBEG00000019179	gars	100	77.515	Labrus_bergylta
ENSAMXG00000014895	gars	62	81.701	ENSLBEG00000013122	-	100	83.511	Labrus_bergylta
ENSAMXG00000014895	gars	96	90.787	ENSLBEG00000019228	gars	100	80.641	Labrus_bergylta
ENSAMXG00000014895	gars	83	86.346	ENSLACG00000002810	GARS	100	86.346	Latimeria_chalumnae
ENSAMXG00000014895	gars	96	90.285	ENSLOCG00000009688	gars	99	79.759	Lepisosteus_oculatus
ENSAMXG00000014895	gars	96	86.097	ENSLAFG00000002496	GARS	99	78.343	Loxodonta_africana
ENSAMXG00000014895	gars	96	86.767	ENSMFAG00000038863	GARS	96	77.107	Macaca_fascicularis
ENSAMXG00000014895	gars	96	86.767	ENSMMUG00000004719	GARS	96	77.107	Macaca_mulatta
ENSAMXG00000014895	gars	96	79.732	ENSMNEG00000043203	GARS	96	71.489	Macaca_nemestrina
ENSAMXG00000014895	gars	96	86.767	ENSMLEG00000044430	GARS	96	77.107	Mandrillus_leucophaeus
ENSAMXG00000014895	gars	96	90.117	ENSMAMG00000001894	gars	99	83.058	Mastacembelus_armatus
ENSAMXG00000014895	gars	96	90.452	ENSMZEG00005019740	gars	100	80.774	Maylandia_zebra
ENSAMXG00000014895	gars	95	85.160	ENSMZEG00005019754	gars	100	77.515	Maylandia_zebra
ENSAMXG00000014895	gars	96	86.097	ENSMGAG00000003162	GARS	98	75.716	Meleagris_gallopavo
ENSAMXG00000014895	gars	96	86.767	ENSMAUG00000016852	Gars	99	76.000	Mesocricetus_auratus
ENSAMXG00000014895	gars	96	87.270	ENSMICG00000046006	GARS	100	79.562	Microcebus_murinus
ENSAMXG00000014895	gars	96	86.767	ENSMOCG00000017680	Gars	94	78.832	Microtus_ochrogaster
ENSAMXG00000014895	gars	96	85.000	ENSMMOG00000009695	gars	100	76.627	Mola_mola
ENSAMXG00000014895	gars	55	78.363	ENSMODG00000021163	-	100	78.363	Monodelphis_domestica
ENSAMXG00000014895	gars	96	89.615	ENSMALG00000006592	gars	93	79.840	Monopterus_albus
ENSAMXG00000014895	gars	96	87.102	MGP_CAROLIEiJ_G0028410	Gars	94	78.978	Mus_caroli
ENSAMXG00000014895	gars	96	87.102	ENSMUSG00000029777	Gars	98	76.331	Mus_musculus
ENSAMXG00000014895	gars	96	86.767	MGP_PahariEiJ_G0022160	Gars	98	76.190	Mus_pahari
ENSAMXG00000014895	gars	96	87.102	MGP_SPRETEiJ_G0029412	Gars	99	84.762	Mus_spretus
ENSAMXG00000014895	gars	96	87.102	ENSMPUG00000005116	GARS	99	75.302	Mustela_putorius_furo
ENSAMXG00000014895	gars	96	87.270	ENSMLUG00000002043	GARS	99	75.577	Myotis_lucifugus
ENSAMXG00000014895	gars	96	86.432	ENSNGAG00000021844	Gars	99	74.263	Nannospalax_galili
ENSAMXG00000014895	gars	96	90.620	ENSNBRG00000018585	gars	100	80.908	Neolamprologus_brichardi
ENSAMXG00000014895	gars	62	82.005	ENSNBRG00000018643	gars	100	82.005	Neolamprologus_brichardi
ENSAMXG00000014895	gars	96	87.102	ENSNLEG00000015152	GARS	96	76.999	Nomascus_leucogenys
ENSAMXG00000014895	gars	95	76.342	ENSMEUG00000001741	GARS	100	70.482	Notamacropus_eugenii
ENSAMXG00000014895	gars	85	85.204	ENSOPRG00000005342	GARS	84	85.204	Ochotona_princeps
ENSAMXG00000014895	gars	96	85.216	ENSODEG00000008246	GARS	87	77.713	Octodon_degus
ENSAMXG00000014895	gars	94	81.803	ENSOANG00000006262	GARS	91	74.478	Ornithorhynchus_anatinus
ENSAMXG00000014895	gars	96	86.265	ENSOCUG00000005295	GARS	99	78.792	Oryctolagus_cuniculus
ENSAMXG00000014895	gars	96	89.482	ENSORLG00000009470	gars	100	79.095	Oryzias_latipes
ENSAMXG00000014895	gars	89	91.382	ENSORLG00020013036	gars	100	86.935	Oryzias_latipes_hni
ENSAMXG00000014895	gars	96	90.452	ENSORLG00015012886	gars	100	79.439	Oryzias_latipes_hsok
ENSAMXG00000014895	gars	63	79.949	ENSOMEG00000000133	gars	100	79.949	Oryzias_melastigma
ENSAMXG00000014895	gars	96	87.102	ENSOGAG00000013321	GARS	99	75.436	Otolemur_garnettii
ENSAMXG00000014895	gars	96	86.265	ENSOARG00000008017	GARS	99	74.627	Ovis_aries
ENSAMXG00000014895	gars	96	86.767	ENSPPAG00000037266	GARS	99	75.787	Pan_paniscus
ENSAMXG00000014895	gars	96	86.935	ENSPPRG00000001917	GARS	99	74.798	Panthera_pardus
ENSAMXG00000014895	gars	96	86.935	ENSPTIG00000016096	GARS	99	79.529	Panthera_tigris_altaica
ENSAMXG00000014895	gars	96	86.767	ENSPTRG00000019042	GARS	96	76.858	Pan_troglodytes
ENSAMXG00000014895	gars	96	86.767	ENSPANG00000026231	GARS	96	77.107	Papio_anubis
ENSAMXG00000014895	gars	95	90.604	ENSPKIG00000014863	gars	97	80.589	Paramormyrops_kingsleyae
ENSAMXG00000014895	gars	96	86.432	ENSPSIG00000010935	GARS	96	86.432	Pelodiscus_sinensis
ENSAMXG00000014895	gars	96	84.868	ENSPMGG00000023644	gars	100	76.316	Periophthalmus_magnuspinnatus
ENSAMXG00000014895	gars	62	81.218	ENSPMGG00000023648	gars	99	81.218	Periophthalmus_magnuspinnatus
ENSAMXG00000014895	gars	96	86.767	ENSPEMG00000019930	Gars	100	79.398	Peromyscus_maniculatus_bairdii
ENSAMXG00000014895	gars	95	76.373	ENSPMAG00000006586	gars	98	70.717	Petromyzon_marinus
ENSAMXG00000014895	gars	96	82.245	ENSPCIG00000017010	GARS	97	71.648	Phascolarctos_cinereus
ENSAMXG00000014895	gars	96	90.787	ENSPFOG00000004593	gars	100	80.426	Poecilia_formosa
ENSAMXG00000014895	gars	96	90.955	ENSPLAG00000008038	gars	100	80.692	Poecilia_latipinna
ENSAMXG00000014895	gars	96	90.620	ENSPMEG00000005901	gars	100	80.293	Poecilia_mexicana
ENSAMXG00000014895	gars	96	90.955	ENSPREG00000020960	gars	97	80.940	Poecilia_reticulata
ENSAMXG00000014895	gars	95	86.891	ENSPPYG00000017673	GARS	96	77.215	Pongo_abelii
ENSAMXG00000014895	gars	96	84.255	ENSPCAG00000007199	GARS	99	73.253	Procavia_capensis
ENSAMXG00000014895	gars	96	83.082	ENSPCOG00000008887	GARS	99	72.005	Propithecus_coquereli
ENSAMXG00000014895	gars	96	86.600	ENSPVAG00000013565	GARS	97	76.356	Pteropus_vampyrus
ENSAMXG00000014895	gars	95	84.175	ENSPNYG00000004960	gars	99	76.844	Pundamilia_nyererei
ENSAMXG00000014895	gars	96	89.615	ENSPNYG00000005017	gars	100	80.107	Pundamilia_nyererei
ENSAMXG00000014895	gars	96	92.462	ENSPNAG00000020164	gars	100	84.812	Pygocentrus_nattereri
ENSAMXG00000014895	gars	96	87.102	ENSRNOG00000011052	Gars	98	76.404	Rattus_norvegicus
ENSAMXG00000014895	gars	96	85.595	ENSRBIG00000040287	GARS	92	80.960	Rhinopithecus_bieti
ENSAMXG00000014895	gars	96	86.600	ENSRROG00000044600	GARS	93	78.717	Rhinopithecus_roxellana
ENSAMXG00000014895	gars	95	46.984	YBR121C	GRS1	96	46.273	Saccharomyces_cerevisiae
ENSAMXG00000014895	gars	90	49.288	YPR081C	-	93	48.090	Saccharomyces_cerevisiae
ENSAMXG00000014895	gars	96	86.600	ENSSBOG00000022287	GARS	93	79.009	Saimiri_boliviensis_boliviensis
ENSAMXG00000014895	gars	96	77.815	ENSSHAG00000003419	GARS	99	70.893	Sarcophilus_harrisii
ENSAMXG00000014895	gars	96	91.290	ENSSFOG00015000573	gars	99	78.808	Scleropages_formosus
ENSAMXG00000014895	gars	96	91.122	ENSSMAG00000013672	gars	100	80.826	Scophthalmus_maximus
ENSAMXG00000014895	gars	95	86.149	ENSSMAG00000013709	gars	99	78.222	Scophthalmus_maximus
ENSAMXG00000014895	gars	96	91.290	ENSSDUG00000016795	gars	100	81.308	Seriola_dumerili
ENSAMXG00000014895	gars	95	74.622	ENSSDUG00000016758	gars	100	68.437	Seriola_dumerili
ENSAMXG00000014895	gars	95	86.847	ENSSLDG00000014238	gars	100	78.994	Seriola_lalandi_dorsalis
ENSAMXG00000014895	gars	96	91.457	ENSSLDG00000014279	gars	100	81.308	Seriola_lalandi_dorsalis
ENSAMXG00000014895	gars	71	91.000	ENSSARG00000008410	GARS	71	91.000	Sorex_araneus
ENSAMXG00000014895	gars	96	86.432	ENSSPUG00000001815	-	100	74.297	Sphenodon_punctatus
ENSAMXG00000014895	gars	54	84.366	ENSSPAG00000011882	gars	94	84.366	Stegastes_partitus
ENSAMXG00000014895	gars	96	83.752	ENSSPAG00000012003	gars	99	77.224	Stegastes_partitus
ENSAMXG00000014895	gars	96	87.102	ENSSSCG00000016677	GARS	99	75.267	Sus_scrofa
ENSAMXG00000014895	gars	96	83.056	ENSTGUG00000000364	GARS	100	77.313	Taeniopygia_guttata
ENSAMXG00000014895	gars	96	90.452	ENSTRUG00000017557	gars	100	79.973	Takifugu_rubripes
ENSAMXG00000014895	gars	96	89.950	ENSTNIG00000012738	gars	99	81.805	Tetraodon_nigroviridis
ENSAMXG00000014895	gars	89	80.935	ENSTBEG00000008972	GARS	92	69.231	Tupaia_belangeri
ENSAMXG00000014895	gars	95	86.149	ENSTTRG00000000334	GARS	99	78.765	Tursiops_truncatus
ENSAMXG00000014895	gars	96	87.102	ENSUAMG00000016756	GARS	99	75.100	Ursus_americanus
ENSAMXG00000014895	gars	96	87.102	ENSUMAG00000002158	GARS	97	87.102	Ursus_maritimus
ENSAMXG00000014895	gars	96	78.727	ENSVPAG00000009438	GARS	99	70.097	Vicugna_pacos
ENSAMXG00000014895	gars	95	86.486	ENSVVUG00000020981	GARS	88	78.102	Vulpes_vulpes
ENSAMXG00000014895	gars	96	84.132	ENSXETG00000018474	gars	99	73.103	Xenopus_tropicalis
ENSAMXG00000014895	gars	96	89.018	ENSXCOG00000010005	gars	100	79.603	Xiphophorus_couchianus
ENSAMXG00000014895	gars	96	90.620	ENSXMAG00000009402	gars	98	80.293	Xiphophorus_maculatus