EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000015146 (Gene tree)
Gene ID: 103044565
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12849 bases
Position: chr4:5935835-5948683
Accession: 103044565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015817	TUDOR	PF00567.24	1.5e-113	1	4
ENSAMXP00000015817	TUDOR	PF00567.24	1.5e-113	2	4
ENSAMXP00000015817	TUDOR	PF00567.24	1.5e-113	3	4
ENSAMXP00000015817	TUDOR	PF00567.24	1.5e-113	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000015817	-	4177	XM_007259262	ENSAMXP00000015817	1165 (aa)	XP_007259324	W5L7K5

Gene Model

Click here to download ENSAMXG00000015146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015146's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015146	tdrd1	83	35.360	ENSG00000095627	TDRD1	84	35.360	Homo_sapiens
ENSAMXG00000015146	tdrd1	94	45.161	ENSAPOG00000023199	tdrd1	95	45.430	Acanthochromis_polyacanthus
ENSAMXG00000015146	tdrd1	83	34.778	ENSAMEG00000015182	TDRD1	85	34.778	Ailuropoda_melanoleuca
ENSAMXG00000015146	tdrd1	94	47.670	ENSACIG00000010576	tdrd1	94	47.670	Amphilophus_citrinellus
ENSAMXG00000015146	tdrd1	100	50.842	ENSAOCG00000007059	tdrd1	100	51.007	Amphiprion_ocellaris
ENSAMXG00000015146	tdrd1	96	45.423	ENSAPEG00000017049	tdrd1	98	45.034	Amphiprion_percula
ENSAMXG00000015146	tdrd1	91	48.162	ENSATEG00000021627	tdrd1	91	48.162	Anabas_testudineus
ENSAMXG00000015146	tdrd1	84	34.224	ENSAPLG00000012609	TDRD1	94	34.224	Anas_platyrhynchos
ENSAMXG00000015146	tdrd1	83	33.188	ENSACAG00000009854	TDRD1	78	33.188	Anolis_carolinensis
ENSAMXG00000015146	tdrd1	83	35.157	ENSANAG00000035710	TDRD1	81	35.966	Aotus_nancymaae
ENSAMXG00000015146	tdrd1	100	44.646	ENSACLG00000014107	tdrd1	99	44.646	Astatotilapia_calliptera
ENSAMXG00000015146	tdrd1	86	34.045	ENSBTAG00000006855	TDRD1	81	34.045	Bos_taurus
ENSAMXG00000015146	tdrd1	83	34.385	ENSCJAG00000019270	TDRD1	81	35.155	Callithrix_jacchus
ENSAMXG00000015146	tdrd1	83	33.706	ENSCAFG00000011266	TDRD1	86	33.706	Canis_familiaris
ENSAMXG00000015146	tdrd1	83	33.706	ENSCAFG00020012373	TDRD1	85	33.706	Canis_lupus_dingo
ENSAMXG00000015146	tdrd1	83	33.603	ENSCHIG00000012766	TDRD1	85	33.603	Capra_hircus
ENSAMXG00000015146	tdrd1	82	34.016	ENSTSYG00000004935	TDRD1	80	34.876	Carlito_syrichta
ENSAMXG00000015146	tdrd1	81	33.886	ENSCPOG00000004190	TDRD1	88	33.886	Cavia_porcellus
ENSAMXG00000015146	tdrd1	83	35.217	ENSCCAG00000027375	TDRD1	82	35.217	Cebus_capucinus
ENSAMXG00000015146	tdrd1	93	32.762	ENSCATG00000035999	TDRD1	85	32.762	Cercocebus_atys
ENSAMXG00000015146	tdrd1	79	35.653	ENSCLAG00000003935	TDRD1	85	35.653	Chinchilla_lanigera
ENSAMXG00000015146	tdrd1	93	33.453	ENSCSAG00000005071	TDRD1	85	33.453	Chlorocebus_sabaeus
ENSAMXG00000015146	tdrd1	81	38.235	ENSCHOG00000001690	TDRD1	75	38.235	Choloepus_hoffmanni
ENSAMXG00000015146	tdrd1	86	36.663	ENSCPBG00000003780	TDRD1	83	35.992	Chrysemys_picta_bellii
ENSAMXG00000015146	tdrd1	93	33.303	ENSCANG00000035172	TDRD1	85	33.303	Colobus_angolensis_palliatus
ENSAMXG00000015146	tdrd1	87	33.474	ENSCGRG00001004632	Tdrd1	90	33.474	Cricetulus_griseus_chok1gshd
ENSAMXG00000015146	tdrd1	89	33.238	ENSCGRG00000004981	Tdrd1	90	33.238	Cricetulus_griseus_crigri
ENSAMXG00000015146	tdrd1	91	41.815	ENSCSEG00000006983	tdrd1	98	41.322	Cynoglossus_semilaevis
ENSAMXG00000015146	tdrd1	86	45.030	ENSCVAG00000020980	tdrd1	96	45.030	Cyprinodon_variegatus
ENSAMXG00000015146	tdrd1	99	59.380	ENSDARG00000007465	tdrd1	99	59.380	Danio_rerio
ENSAMXG00000015146	tdrd1	81	34.152	ENSDNOG00000012114	TDRD1	79	34.258	Dasypus_novemcinctus
ENSAMXG00000015146	tdrd1	83	35.025	ENSDORG00000009986	Tdrd1	86	35.025	Dipodomys_ordii
ENSAMXG00000015146	tdrd1	81	41.935	ENSETEG00000020143	TDRD1	74	41.935	Echinops_telfairi
ENSAMXG00000015146	tdrd1	85	32.107	ENSEASG00005014802	TDRD1	87	32.408	Equus_asinus_asinus
ENSAMXG00000015146	tdrd1	83	34.177	ENSECAG00000009748	TDRD1	82	33.198	Equus_caballus
ENSAMXG00000015146	tdrd1	83	32.297	ENSEEUG00000010076	TDRD1	85	32.297	Erinaceus_europaeus
ENSAMXG00000015146	tdrd1	99	53.262	ENSELUG00000024364	tdrd1	99	53.262	Esox_lucius
ENSAMXG00000015146	tdrd1	85	33.920	ENSFCAG00000000632	TDRD1	87	34.018	Felis_catus
ENSAMXG00000015146	tdrd1	74	36.239	ENSFALG00000002237	TDRD1	85	36.391	Ficedula_albicollis
ENSAMXG00000015146	tdrd1	79	35.676	ENSFDAG00000013225	TDRD1	86	35.676	Fukomys_damarensis
ENSAMXG00000015146	tdrd1	91	37.400	ENSFHEG00000009203	tdrd1	99	36.735	Fundulus_heteroclitus
ENSAMXG00000015146	tdrd1	75	47.664	ENSGMOG00000016797	-	69	47.664	Gadus_morhua
ENSAMXG00000015146	tdrd1	83	33.163	ENSGALG00000046180	TDRD1	91	33.163	Gallus_gallus
ENSAMXG00000015146	tdrd1	93	43.604	ENSGAFG00000002668	tdrd1	99	42.700	Gambusia_affinis
ENSAMXG00000015146	tdrd1	74	48.514	ENSGACG00000006590	tdrd1	100	48.514	Gasterosteus_aculeatus
ENSAMXG00000015146	tdrd1	83	35.193	ENSGGOG00000004250	TDRD1	84	35.193	Gorilla_gorilla
ENSAMXG00000015146	tdrd1	100	44.765	ENSHBUG00000005216	tdrd1	99	44.765	Haplochromis_burtoni
ENSAMXG00000015146	tdrd1	82	33.866	ENSHGLG00000010877	TDRD1	86	33.866	Heterocephalus_glaber_female
ENSAMXG00000015146	tdrd1	82	35.616	ENSHGLG00100013857	TDRD1	86	35.616	Heterocephalus_glaber_male
ENSAMXG00000015146	tdrd1	99	39.555	ENSHCOG00000002840	tdrd1	99	39.431	Hippocampus_comes
ENSAMXG00000015146	tdrd1	100	67.866	ENSIPUG00000017232	tdrd1	100	67.866	Ictalurus_punctatus
ENSAMXG00000015146	tdrd1	85	34.332	ENSSTOG00000003221	TDRD1	85	33.571	Ictidomys_tridecemlineatus
ENSAMXG00000015146	tdrd1	83	34.141	ENSJJAG00000014720	Tdrd1	86	34.141	Jaculus_jaculus
ENSAMXG00000015146	tdrd1	84	48.335	ENSKMAG00000018558	tdrd1	92	48.335	Kryptolebias_marmoratus
ENSAMXG00000015146	tdrd1	99	45.059	ENSLBEG00000004161	tdrd1	97	45.137	Labrus_bergylta
ENSAMXG00000015146	tdrd1	83	35.960	ENSLACG00000011559	TDRD1	84	35.960	Latimeria_chalumnae
ENSAMXG00000015146	tdrd1	99	42.373	ENSLOCG00000012030	tdrd1	100	46.608	Lepisosteus_oculatus
ENSAMXG00000015146	tdrd1	75	34.124	ENSLAFG00000011575	TDRD1	97	34.124	Loxodonta_africana
ENSAMXG00000015146	tdrd1	93	32.852	ENSMFAG00000043487	TDRD1	86	32.852	Macaca_fascicularis
ENSAMXG00000015146	tdrd1	93	32.852	ENSMMUG00000022517	TDRD1	85	32.852	Macaca_mulatta
ENSAMXG00000015146	tdrd1	93	33.032	ENSMNEG00000031108	TDRD1	86	33.032	Macaca_nemestrina
ENSAMXG00000015146	tdrd1	93	32.942	ENSMLEG00000032281	TDRD1	85	32.942	Mandrillus_leucophaeus
ENSAMXG00000015146	tdrd1	91	48.708	ENSMAMG00000015287	tdrd1	93	48.708	Mastacembelus_armatus
ENSAMXG00000015146	tdrd1	100	44.922	ENSMZEG00005025315	tdrd1	99	44.922	Maylandia_zebra
ENSAMXG00000015146	tdrd1	82	33.577	ENSMGAG00000011067	TDRD1	99	32.053	Meleagris_gallopavo
ENSAMXG00000015146	tdrd1	74	35.104	ENSMAUG00000012164	Tdrd1	79	35.104	Mesocricetus_auratus
ENSAMXG00000015146	tdrd1	81	34.332	ENSMICG00000016190	TDRD1	85	34.332	Microcebus_murinus
ENSAMXG00000015146	tdrd1	83	34.673	ENSMOCG00000022360	Tdrd1	91	33.960	Microtus_ochrogaster
ENSAMXG00000015146	tdrd1	91	47.097	ENSMMOG00000014068	tdrd1	91	47.097	Mola_mola
ENSAMXG00000015146	tdrd1	84	34.394	ENSMODG00000009788	TDRD1	87	34.394	Monodelphis_domestica
ENSAMXG00000015146	tdrd1	99	45.802	ENSMALG00000022115	tdrd1	97	46.979	Monopterus_albus
ENSAMXG00000015146	tdrd1	88	33.524	MGP_CAROLIEiJ_G0023095	Tdrd1	90	33.619	Mus_caroli
ENSAMXG00000015146	tdrd1	91	33.395	ENSMUSG00000025081	Tdrd1	88	33.488	Mus_musculus
ENSAMXG00000015146	tdrd1	91	33.703	MGP_PahariEiJ_G0014583	Tdrd1	90	33.154	Mus_pahari
ENSAMXG00000015146	tdrd1	90	33.643	MGP_SPRETEiJ_G0024016	Tdrd1	88	33.736	Mus_spretus
ENSAMXG00000015146	tdrd1	75	34.187	ENSMPUG00000001987	TDRD1	78	34.187	Mustela_putorius_furo
ENSAMXG00000015146	tdrd1	89	32.796	ENSNGAG00000015231	Tdrd1	91	32.796	Nannospalax_galili
ENSAMXG00000015146	tdrd1	100	45.188	ENSNBRG00000017920	tdrd1	99	45.188	Neolamprologus_brichardi
ENSAMXG00000015146	tdrd1	83	34.283	ENSNLEG00000016228	TDRD1	84	34.283	Nomascus_leucogenys
ENSAMXG00000015146	tdrd1	82	33.333	ENSMEUG00000007717	TDRD1	84	33.333	Notamacropus_eugenii
ENSAMXG00000015146	tdrd1	93	32.337	ENSOPRG00000009180	TDRD1	85	32.337	Ochotona_princeps
ENSAMXG00000015146	tdrd1	81	34.647	ENSODEG00000011965	TDRD1	86	34.647	Octodon_degus
ENSAMXG00000015146	tdrd1	100	45.250	ENSONIG00000016382	tdrd1	100	45.250	Oreochromis_niloticus
ENSAMXG00000015146	tdrd1	86	34.634	ENSOANG00000001562	TDRD1	85	34.634	Ornithorhynchus_anatinus
ENSAMXG00000015146	tdrd1	83	35.111	ENSOCUG00000025327	TDRD1	87	35.111	Oryctolagus_cuniculus
ENSAMXG00000015146	tdrd1	99	43.027	ENSORLG00000004833	tdrd1	99	43.186	Oryzias_latipes
ENSAMXG00000015146	tdrd1	99	43.003	ENSORLG00020019231	tdrd1	99	43.003	Oryzias_latipes_hni
ENSAMXG00000015146	tdrd1	99	43.076	ENSORLG00015017184	tdrd1	99	43.076	Oryzias_latipes_hsok
ENSAMXG00000015146	tdrd1	99	42.965	ENSOMEG00000023637	tdrd1	98	42.928	Oryzias_melastigma
ENSAMXG00000015146	tdrd1	83	34.181	ENSOGAG00000001370	TDRD1	82	34.181	Otolemur_garnettii
ENSAMXG00000015146	tdrd1	86	33.721	ENSOARG00000014200	-	84	33.721	Ovis_aries
ENSAMXG00000015146	tdrd1	83	35.562	ENSPPAG00000041621	TDRD1	84	35.562	Pan_paniscus
ENSAMXG00000015146	tdrd1	85	33.920	ENSPPRG00000000191	TDRD1	87	34.018	Panthera_pardus
ENSAMXG00000015146	tdrd1	85	33.628	ENSPTIG00000010264	TDRD1	88	33.727	Panthera_tigris_altaica
ENSAMXG00000015146	tdrd1	83	35.562	ENSPTRG00000002958	TDRD1	84	35.562	Pan_troglodytes
ENSAMXG00000015146	tdrd1	93	32.822	ENSPANG00000020752	TDRD1	85	34.436	Papio_anubis
ENSAMXG00000015146	tdrd1	95	45.689	ENSPKIG00000010586	tdrd1	95	45.689	Paramormyrops_kingsleyae
ENSAMXG00000015146	tdrd1	82	35.172	ENSPSIG00000014655	TDRD1	85	35.172	Pelodiscus_sinensis
ENSAMXG00000015146	tdrd1	92	41.474	ENSPMGG00000018890	tdrd1	99	42.116	Periophthalmus_magnuspinnatus
ENSAMXG00000015146	tdrd1	85	33.792	ENSPEMG00000004582	Tdrd1	88	33.792	Peromyscus_maniculatus_bairdii
ENSAMXG00000015146	tdrd1	83	35.223	ENSPCIG00000009739	TDRD1	85	35.223	Phascolarctos_cinereus
ENSAMXG00000015146	tdrd1	91	43.364	ENSPFOG00000002145	tdrd1	99	43.364	Poecilia_formosa
ENSAMXG00000015146	tdrd1	99	42.487	ENSPLAG00000010241	tdrd1	99	42.487	Poecilia_latipinna
ENSAMXG00000015146	tdrd1	99	42.593	ENSPMEG00000021893	tdrd1	99	42.593	Poecilia_mexicana
ENSAMXG00000015146	tdrd1	99	43.328	ENSPREG00000022663	tdrd1	99	43.328	Poecilia_reticulata
ENSAMXG00000015146	tdrd1	83	33.840	ENSPPYG00000002671	TDRD1	83	33.840	Pongo_abelii
ENSAMXG00000015146	tdrd1	82	32.061	ENSPCAG00000006692	TDRD1	73	32.061	Procavia_capensis
ENSAMXG00000015146	tdrd1	93	31.341	ENSPCOG00000026619	TDRD1	81	34.009	Propithecus_coquereli
ENSAMXG00000015146	tdrd1	83	32.487	ENSPVAG00000003055	TDRD1	83	32.487	Pteropus_vampyrus
ENSAMXG00000015146	tdrd1	100	44.658	ENSPNYG00000001706	tdrd1	99	44.658	Pundamilia_nyererei
ENSAMXG00000015146	tdrd1	98	76.635	ENSPNAG00000005831	tdrd1	97	76.635	Pygocentrus_nattereri
ENSAMXG00000015146	tdrd1	87	34.193	ENSRNOG00000017064	Tdrd1	86	34.193	Rattus_norvegicus
ENSAMXG00000015146	tdrd1	83	35.431	ENSRBIG00000029668	TDRD1	83	36.315	Rhinopithecus_bieti
ENSAMXG00000015146	tdrd1	83	35.330	ENSRROG00000043379	TDRD1	81	36.170	Rhinopithecus_roxellana
ENSAMXG00000015146	tdrd1	83	35.621	ENSSBOG00000023561	TDRD1	81	36.451	Saimiri_boliviensis_boliviensis
ENSAMXG00000015146	tdrd1	87	33.910	ENSSHAG00000014311	TDRD1	87	34.791	Sarcophilus_harrisii
ENSAMXG00000015146	tdrd1	86	44.163	ENSSFOG00015022020	tdrd1	95	44.163	Scleropages_formosus
ENSAMXG00000015146	tdrd1	95	46.544	ENSSMAG00000019271	tdrd1	97	46.638	Scophthalmus_maximus
ENSAMXG00000015146	tdrd1	91	49.261	ENSSDUG00000022012	tdrd1	94	49.261	Seriola_dumerili
ENSAMXG00000015146	tdrd1	91	49.581	ENSSLDG00000006423	tdrd1	95	49.581	Seriola_lalandi_dorsalis
ENSAMXG00000015146	tdrd1	83	34.790	ENSSARG00000008828	TDRD1	68	34.790	Sorex_araneus
ENSAMXG00000015146	tdrd1	85	33.057	ENSSPUG00000005015	TDRD1	83	33.057	Sphenodon_punctatus
ENSAMXG00000015146	tdrd1	96	45.281	ENSSPAG00000018805	tdrd1	98	45.281	Stegastes_partitus
ENSAMXG00000015146	tdrd1	83	33.773	ENSSSCG00000021075	TDRD1	86	33.773	Sus_scrofa
ENSAMXG00000015146	tdrd1	75	35.637	ENSTGUG00000010905	TDRD1	91	35.791	Taeniopygia_guttata
ENSAMXG00000015146	tdrd1	88	46.575	ENSTRUG00000012142	tdrd1	100	44.864	Takifugu_rubripes
ENSAMXG00000015146	tdrd1	78	40.698	ENSTNIG00000018898	tdrd1	100	40.698	Tetraodon_nigroviridis
ENSAMXG00000015146	tdrd1	84	34.783	ENSTBEG00000014417	-	85	32.535	Tupaia_belangeri
ENSAMXG00000015146	tdrd1	85	32.970	ENSTTRG00000010147	TDRD1	87	32.970	Tursiops_truncatus
ENSAMXG00000015146	tdrd1	83	34.416	ENSUAMG00000009025	TDRD1	85	34.416	Ursus_americanus
ENSAMXG00000015146	tdrd1	83	34.650	ENSUMAG00000000705	TDRD1	85	34.650	Ursus_maritimus
ENSAMXG00000015146	tdrd1	81	34.504	ENSVPAG00000004000	TDRD1	83	34.504	Vicugna_pacos
ENSAMXG00000015146	tdrd1	83	34.280	ENSVVUG00000009750	TDRD1	86	34.280	Vulpes_vulpes
ENSAMXG00000015146	tdrd1	75	47.596	ENSXCOG00000006412	tdrd1	92	47.596	Xiphophorus_couchianus
ENSAMXG00000015146	tdrd1	84	46.815	ENSXMAG00000008104	tdrd1	93	45.421	Xiphophorus_maculatus