EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015228 (Gene tree)
Gene ID: 103035241
Gene Symbol: -
Alias: -
Full Name: zinc finger protein Gfi-1b-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7287 bases
Position: chr23:654018-661304
Accession: 103035241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015662	zf-C2H2	PF00096.26	1.9e-23	1	4
ENSAMXP00000015662	zf-C2H2	PF00096.26	1.9e-23	2	4
ENSAMXP00000015662	zf-C2H2	PF00096.26	1.9e-23	3	4
ENSAMXP00000015662	zf-C2H2	PF00096.26	1.9e-23	4	4
ENSAMXP00000015662	zf-met	PF12874.7	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000015662	-	2086	XM_007229823	ENSAMXP00000015662	318 (aa)	XP_007229885	W5L750

Gene Model

Click here to download ENSAMXG00000015228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015228	-	58	48.958	ENSAMXG00000035690	-	70	48.958
ENSAMXG00000015228	-	56	42.478	ENSAMXG00000034847	-	84	42.478
ENSAMXG00000015228	-	68	42.857	ENSAMXG00000035246	-	68	42.857
ENSAMXG00000015228	-	78	45.455	ENSAMXG00000038536	-	98	45.455
ENSAMXG00000015228	-	51	46.053	ENSAMXG00000036567	-	76	46.053
ENSAMXG00000015228	-	52	38.679	ENSAMXG00000038085	scrt1a	62	38.679
ENSAMXG00000015228	-	61	44.545	ENSAMXG00000003002	-	87	44.545
ENSAMXG00000015228	-	52	43.636	ENSAMXG00000024978	-	95	43.636
ENSAMXG00000015228	-	56	47.273	ENSAMXG00000039016	-	78	47.273
ENSAMXG00000015228	-	61	44.545	ENSAMXG00000031844	-	90	44.545
ENSAMXG00000015228	-	58	42.857	ENSAMXG00000033252	-	91	42.857
ENSAMXG00000015228	-	51	47.619	ENSAMXG00000035920	-	89	47.619
ENSAMXG00000015228	-	54	46.364	ENSAMXG00000025452	-	93	46.364
ENSAMXG00000015228	-	56	41.935	ENSAMXG00000041864	prdm5	93	41.935
ENSAMXG00000015228	-	51	46.000	ENSAMXG00000011804	-	84	46.000
ENSAMXG00000015228	-	59	35.366	ENSAMXG00000039162	-	97	35.366
ENSAMXG00000015228	-	53	43.750	ENSAMXG00000041609	-	92	43.750
ENSAMXG00000015228	-	57	37.179	ENSAMXG00000044034	-	59	37.179
ENSAMXG00000015228	-	56	41.129	ENSAMXG00000009776	-	96	41.129
ENSAMXG00000015228	-	58	43.636	ENSAMXG00000029178	-	97	43.636
ENSAMXG00000015228	-	52	36.441	ENSAMXG00000033001	-	52	36.441
ENSAMXG00000015228	-	57	45.455	ENSAMXG00000031501	-	76	45.455
ENSAMXG00000015228	-	51	43.396	ENSAMXG00000039744	-	99	43.396
ENSAMXG00000015228	-	59	49.091	ENSAMXG00000037143	-	95	49.091
ENSAMXG00000015228	-	56	39.474	ENSAMXG00000025761	-	82	40.659
ENSAMXG00000015228	-	56	43.636	ENSAMXG00000034096	-	71	43.636
ENSAMXG00000015228	-	60	38.462	ENSAMXG00000039622	zbtb41	54	38.462
ENSAMXG00000015228	-	58	45.349	ENSAMXG00000044110	-	86	45.349
ENSAMXG00000015228	-	55	42.727	ENSAMXG00000044096	-	84	42.727
ENSAMXG00000015228	-	57	45.918	ENSAMXG00000036633	-	63	45.794
ENSAMXG00000015228	-	56	41.837	ENSAMXG00000043978	-	82	41.837
ENSAMXG00000015228	-	53	35.185	ENSAMXG00000029059	-	72	38.095
ENSAMXG00000015228	-	58	41.584	ENSAMXG00000036241	-	82	41.584
ENSAMXG00000015228	-	56	41.176	ENSAMXG00000042275	-	93	41.176
ENSAMXG00000015228	-	51	46.364	ENSAMXG00000039879	-	98	46.364
ENSAMXG00000015228	-	51	42.593	ENSAMXG00000038122	-	84	46.154
ENSAMXG00000015228	-	52	43.333	ENSAMXG00000031307	-	58	43.333
ENSAMXG00000015228	-	56	42.727	ENSAMXG00000032457	-	92	42.727
ENSAMXG00000015228	-	57	35.514	ENSAMXG00000008771	PRDM15	53	35.514
ENSAMXG00000015228	-	56	43.860	ENSAMXG00000036849	-	89	43.860
ENSAMXG00000015228	-	74	33.193	ENSAMXG00000034333	-	83	45.455
ENSAMXG00000015228	-	74	49.398	ENSAMXG00000037760	-	98	49.398
ENSAMXG00000015228	-	59	42.424	ENSAMXG00000030530	-	97	42.424
ENSAMXG00000015228	-	61	44.954	ENSAMXG00000033013	-	80	44.954
ENSAMXG00000015228	-	56	42.727	ENSAMXG00000032619	-	97	42.727
ENSAMXG00000015228	-	56	38.938	ENSAMXG00000043178	-	63	38.938
ENSAMXG00000015228	-	51	50.000	ENSAMXG00000029518	-	53	50.000
ENSAMXG00000015228	-	59	43.299	ENSAMXG00000043302	-	73	43.299
ENSAMXG00000015228	-	51	41.964	ENSAMXG00000039770	-	79	41.964
ENSAMXG00000015228	-	61	49.398	ENSAMXG00000034402	-	95	49.398
ENSAMXG00000015228	-	61	41.593	ENSAMXG00000036915	-	90	41.593
ENSAMXG00000015228	-	55	50.000	ENSAMXG00000013492	-	97	48.810
ENSAMXG00000015228	-	51	44.944	ENSAMXG00000025965	-	94	44.944
ENSAMXG00000015228	-	61	45.161	ENSAMXG00000010930	-	76	45.161
ENSAMXG00000015228	-	56	42.727	ENSAMXG00000035875	-	98	42.727
ENSAMXG00000015228	-	51	40.000	ENSAMXG00000042191	zbtb47a	63	40.000
ENSAMXG00000015228	-	79	47.458	ENSAMXG00000009558	-	96	47.458
ENSAMXG00000015228	-	51	46.053	ENSAMXG00000008613	-	92	46.053
ENSAMXG00000015228	-	64	43.636	ENSAMXG00000042593	-	90	43.636
ENSAMXG00000015228	-	61	44.643	ENSAMXG00000026144	-	88	44.643
ENSAMXG00000015228	-	62	39.516	ENSAMXG00000026143	-	95	39.516
ENSAMXG00000015228	-	54	39.091	ENSAMXG00000026142	-	86	39.091
ENSAMXG00000015228	-	56	44.554	ENSAMXG00000033500	-	92	44.554
ENSAMXG00000015228	-	54	42.857	ENSAMXG00000036257	-	92	42.857
ENSAMXG00000015228	-	61	42.991	ENSAMXG00000040806	-	88	42.991
ENSAMXG00000015228	-	52	44.792	ENSAMXG00000007973	-	86	42.982
ENSAMXG00000015228	-	56	43.860	ENSAMXG00000037717	-	94	43.860
ENSAMXG00000015228	-	56	45.161	ENSAMXG00000039881	-	50	45.161
ENSAMXG00000015228	-	66	45.299	ENSAMXG00000034344	-	86	45.299
ENSAMXG00000015228	-	72	42.857	ENSAMXG00000009563	-	90	42.857
ENSAMXG00000015228	-	58	47.436	ENSAMXG00000001626	-	95	47.436
ENSAMXG00000015228	-	79	46.154	ENSAMXG00000042746	-	98	46.154
ENSAMXG00000015228	-	74	46.667	ENSAMXG00000041861	-	92	46.667
ENSAMXG00000015228	-	75	46.591	ENSAMXG00000031009	-	86	46.591
ENSAMXG00000015228	-	68	45.570	ENSAMXG00000042784	-	87	43.925
ENSAMXG00000015228	-	56	43.636	ENSAMXG00000042174	-	89	43.636
ENSAMXG00000015228	-	57	40.870	ENSAMXG00000032237	-	95	40.870
ENSAMXG00000015228	-	56	43.636	ENSAMXG00000010078	-	86	43.636
ENSAMXG00000015228	-	61	36.364	ENSAMXG00000033299	-	63	36.364
ENSAMXG00000015228	-	95	39.474	ENSAMXG00000039600	gfi1ab	100	39.474
ENSAMXG00000015228	-	56	46.364	ENSAMXG00000036762	-	97	46.364
ENSAMXG00000015228	-	51	46.988	ENSAMXG00000041128	-	88	46.988
ENSAMXG00000015228	-	65	45.455	ENSAMXG00000014745	-	87	45.455
ENSAMXG00000015228	-	80	42.727	ENSAMXG00000030659	-	94	42.727
ENSAMXG00000015228	-	69	46.429	ENSAMXG00000035437	-	99	46.429
ENSAMXG00000015228	-	56	44.545	ENSAMXG00000040212	-	82	44.545
ENSAMXG00000015228	-	58	49.383	ENSAMXG00000024907	znf319b	87	49.383
ENSAMXG00000015228	-	51	45.977	ENSAMXG00000041725	-	89	45.977
ENSAMXG00000015228	-	51	44.545	ENSAMXG00000029828	-	94	44.545
ENSAMXG00000015228	-	59	43.750	ENSAMXG00000037709	-	97	43.750
ENSAMXG00000015228	-	51	47.273	ENSAMXG00000037703	-	78	47.273
ENSAMXG00000015228	-	56	41.964	ENSAMXG00000039408	-	89	41.964
ENSAMXG00000015228	-	51	42.982	ENSAMXG00000036233	-	78	42.982
ENSAMXG00000015228	-	52	40.625	ENSAMXG00000043019	-	90	40.625
ENSAMXG00000015228	-	61	42.991	ENSAMXG00000040630	-	98	41.818
ENSAMXG00000015228	-	60	43.363	ENSAMXG00000010805	-	95	43.363
ENSAMXG00000015228	-	53	46.226	ENSAMXG00000038284	-	82	46.226
ENSAMXG00000015228	-	56	44.186	ENSAMXG00000038280	-	88	44.186
ENSAMXG00000015228	-	51	46.237	ENSAMXG00000030911	-	68	46.237
ENSAMXG00000015228	-	58	45.536	ENSAMXG00000038325	-	92	45.536
ENSAMXG00000015228	-	53	43.590	ENSAMXG00000034934	-	81	43.590
ENSAMXG00000015228	-	73	43.636	ENSAMXG00000029878	-	96	43.636
ENSAMXG00000015228	-	56	43.750	ENSAMXG00000038905	-	88	43.750
ENSAMXG00000015228	-	60	44.545	ENSAMXG00000038453	-	84	44.545
ENSAMXG00000015228	-	56	44.037	ENSAMXG00000043541	-	80	44.037
ENSAMXG00000015228	-	98	42.202	ENSAMXG00000006669	GFI1	98	42.202
ENSAMXG00000015228	-	66	46.552	ENSAMXG00000031794	-	94	46.552
ENSAMXG00000015228	-	57	45.714	ENSAMXG00000037326	-	91	45.714
ENSAMXG00000015228	-	51	47.143	ENSAMXG00000035809	-	99	47.143
ENSAMXG00000015228	-	53	44.545	ENSAMXG00000031489	-	92	44.545
ENSAMXG00000015228	-	54	44.545	ENSAMXG00000012589	-	82	44.545
ENSAMXG00000015228	-	68	40.323	ENSAMXG00000029960	-	94	40.323
ENSAMXG00000015228	-	51	41.228	ENSAMXG00000035683	-	93	41.228
ENSAMXG00000015228	-	61	44.545	ENSAMXG00000034857	-	64	44.545
ENSAMXG00000015228	-	51	50.000	ENSAMXG00000039432	-	93	50.000
ENSAMXG00000015228	-	62	40.909	ENSAMXG00000017959	-	97	40.909
ENSAMXG00000015228	-	57	42.982	ENSAMXG00000034958	-	91	42.982
ENSAMXG00000015228	-	64	42.697	ENSAMXG00000004610	-	95	42.697
ENSAMXG00000015228	-	61	46.667	ENSAMXG00000012873	-	90	46.667
ENSAMXG00000015228	-	62	46.226	ENSAMXG00000032212	-	87	46.226
ENSAMXG00000015228	-	68	46.078	ENSAMXG00000039004	-	87	46.078
ENSAMXG00000015228	-	68	43.636	ENSAMXG00000033201	-	93	43.636
ENSAMXG00000015228	-	54	45.455	ENSAMXG00000037885	-	97	45.455
ENSAMXG00000015228	-	56	42.202	ENSAMXG00000035127	-	99	45.455
ENSAMXG00000015228	-	51	45.455	ENSAMXG00000018161	-	96	45.455
ENSAMXG00000015228	-	56	44.545	ENSAMXG00000029783	-	90	44.545
ENSAMXG00000015228	-	56	45.045	ENSAMXG00000030742	-	95	45.045
ENSAMXG00000015228	-	51	44.545	ENSAMXG00000007092	-	97	44.545
ENSAMXG00000015228	-	85	44.545	ENSAMXG00000040677	-	90	44.545
ENSAMXG00000015228	-	51	44.094	ENSAMXG00000037981	-	70	44.094
ENSAMXG00000015228	-	51	43.836	ENSAMXG00000042774	-	85	43.836
ENSAMXG00000015228	-	56	41.322	ENSAMXG00000031496	-	87	41.322
ENSAMXG00000015228	-	68	41.228	ENSAMXG00000042633	-	92	41.228
ENSAMXG00000015228	-	61	42.105	ENSAMXG00000039752	-	88	42.105
ENSAMXG00000015228	-	53	47.273	ENSAMXG00000000353	-	94	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015228	-	51	65.031	ENSAMEG00000013858	-	84	65.031	Ailuropoda_melanoleuca
ENSAMXG00000015228	-	51	65.455	ENSACIG00000002180	-	96	65.455	Amphilophus_citrinellus
ENSAMXG00000015228	-	54	62.791	ENSAPLG00000015700	GFI1	50	62.791	Anas_platyrhynchos
ENSAMXG00000015228	-	56	62.360	ENSBTAG00000016723	GFI1	67	46.205	Bos_taurus
ENSAMXG00000015228	-	56	62.360	ENSCAFG00000020155	GFI1	67	46.205	Canis_familiaris
ENSAMXG00000015228	-	56	62.360	ENSCAFG00020013371	GFI1	59	46.053	Canis_lupus_dingo
ENSAMXG00000015228	-	52	84.404	ENSCAPG00000016268	-	96	84.404	Cavia_aperea
ENSAMXG00000015228	-	56	62.147	ENSCPOG00000011727	GFI1	67	45.695	Cavia_porcellus
ENSAMXG00000015228	-	51	82.883	ENSCPBG00000015742	-	82	82.883	Chrysemys_picta_bellii
ENSAMXG00000015228	-	52	58.788	ENSCING00000011342	-	87	58.788	Ciona_intestinalis
ENSAMXG00000015228	-	51	82.883	ENSCGRG00000013485	-	82	82.883	Cricetulus_griseus_crigri
ENSAMXG00000015228	-	51	65.031	ENSCSEG00000017729	GFI1	100	38.931	Cynoglossus_semilaevis
ENSAMXG00000015228	-	51	65.644	ENSCVAG00000011828	gfi1ab	100	65.644	Cyprinodon_variegatus
ENSAMXG00000015228	-	62	58.081	ENSDARG00000044457	gfi1ab	50	58.081	Danio_rerio
ENSAMXG00000015228	-	51	82.883	ENSDORG00000023443	-	82	82.883	Dipodomys_ordii
ENSAMXG00000015228	-	96	45.820	ENSEBUG00000008075	gfi1ab	98	45.820	Eptatretus_burgeri
ENSAMXG00000015228	-	54	67.241	ENSELUG00000006948	-	52	67.241	Esox_lucius
ENSAMXG00000015228	-	82	49.042	ENSELUG00000003015	gfi1ab	64	49.042	Esox_lucius
ENSAMXG00000015228	-	56	62.360	ENSFCAG00000005914	GFI1	67	46.535	Felis_catus
ENSAMXG00000015228	-	51	82.883	ENSFDAG00000019296	-	82	82.883	Fukomys_damarensis
ENSAMXG00000015228	-	96	52.215	ENSGAFG00000014303	-	89	52.215	Gambusia_affinis
ENSAMXG00000015228	-	69	54.751	ENSGACG00000004257	gfi1ab	56	54.751	Gasterosteus_aculeatus
ENSAMXG00000015228	-	51	82.883	ENSGAGG00000015899	GFI1	82	82.883	Gopherus_agassizii
ENSAMXG00000015228	-	56	62.360	ENSHGLG00000008020	GFI1	61	48.889	Heterocephalus_glaber_female
ENSAMXG00000015228	-	56	62.360	ENSHGLG00100000610	GFI1	61	48.889	Heterocephalus_glaber_male
ENSAMXG00000015228	-	95	44.000	ENSHCOG00000019555	GFI1	100	44.000	Hippocampus_comes
ENSAMXG00000015228	-	100	68.111	ENSIPUG00000021407	-	99	68.111	Ictalurus_punctatus
ENSAMXG00000015228	-	52	84.404	ENSJJAG00000022622	-	96	84.404	Jaculus_jaculus
ENSAMXG00000015228	-	62	59.091	ENSLBEG00000027776	gfi1ab	57	53.571	Labrus_bergylta
ENSAMXG00000015228	-	96	47.590	ENSLACG00000017590	-	99	46.884	Latimeria_chalumnae
ENSAMXG00000015228	-	51	82.883	ENSMMUG00000005068	GFI1	82	82.883	Macaca_mulatta
ENSAMXG00000015228	-	72	53.947	ENSMAMG00000008125	gfi1ab	59	53.947	Mastacembelus_armatus
ENSAMXG00000015228	-	51	82.883	ENSMAUG00000021273	-	82	82.883	Mesocricetus_auratus
ENSAMXG00000015228	-	51	82.883	ENSMOCG00000004478	-	82	82.883	Microtus_ochrogaster
ENSAMXG00000015228	-	51	82.883	MGP_CAROLIEiJ_G0027508	Gfi1	82	82.883	Mus_caroli
ENSAMXG00000015228	-	63	58.000	ENSMUSG00000029275	Gfi1	63	47.766	Mus_musculus
ENSAMXG00000015228	-	51	82.883	MGP_PahariEiJ_G0017280	Gfi1	82	82.883	Mus_pahari
ENSAMXG00000015228	-	51	82.883	ENSNGAG00000002549	-	82	82.883	Nannospalax_galili
ENSAMXG00000015228	-	51	82.883	ENSODEG00000006410	-	82	82.883	Octodon_degus
ENSAMXG00000015228	-	51	65.031	ENSORLG00000005060	GFI1	99	40.415	Oryzias_latipes
ENSAMXG00000015228	-	95	43.976	ENSORLG00020002817	GFI1	98	43.976	Oryzias_latipes_hni
ENSAMXG00000015228	-	51	65.031	ENSORLG00015006070	GFI1	99	39.018	Oryzias_latipes_hsok
ENSAMXG00000015228	-	56	62.360	ENSOGAG00000027913	GFI1	100	42.697	Otolemur_garnettii
ENSAMXG00000015228	-	56	62.360	ENSPPAG00000042186	GFI1	100	41.257	Pan_paniscus
ENSAMXG00000015228	-	56	62.360	ENSPPRG00000007521	GFI1	67	46.535	Panthera_pardus
ENSAMXG00000015228	-	51	83.636	ENSPTIG00000002680	-	81	83.636	Panthera_tigris_altaica
ENSAMXG00000015228	-	64	58.128	ENSPKIG00000004263	GFI1	51	58.128	Paramormyrops_kingsleyae
ENSAMXG00000015228	-	69	55.455	ENSPSIG00000008734	GFI1	58	55.204	Pelodiscus_sinensis
ENSAMXG00000015228	-	51	65.031	ENSPMGG00000011041	GFI1	51	65.031	Periophthalmus_magnuspinnatus
ENSAMXG00000015228	-	52	66.071	ENSPFOG00000024581	-	51	66.071	Poecilia_formosa
ENSAMXG00000015228	-	51	65.644	ENSPLAG00000010879	gfi1ab	52	65.644	Poecilia_latipinna
ENSAMXG00000015228	-	65	64.103	ENSPREG00000007997	GFI1	51	66.026	Poecilia_reticulata
ENSAMXG00000015228	-	56	62.360	ENSPCOG00000020540	GFI1	67	45.695	Propithecus_coquereli
ENSAMXG00000015228	-	95	41.053	ENSPNAG00000027258	gfi1ab	100	41.053	Pygocentrus_nattereri
ENSAMXG00000015228	-	98	60.674	ENSPNAG00000028014	GFI1	100	60.674	Pygocentrus_nattereri
ENSAMXG00000015228	-	97	80.583	ENSPNAG00000014299	-	98	80.583	Pygocentrus_nattereri
ENSAMXG00000015228	-	96	58.416	ENSSFOG00015020295	gfi1	100	58.416	Scleropages_formosus
ENSAMXG00000015228	-	98	47.720	ENSSFOG00015008114	-	99	48.485	Scleropages_formosus
ENSAMXG00000015228	-	97	48.589	ENSSMAG00000002798	-	99	48.589	Scophthalmus_maximus
ENSAMXG00000015228	-	72	52.632	ENSSDUG00000022410	gfi1ab	61	52.632	Seriola_dumerili
ENSAMXG00000015228	-	51	84.112	ENSSLDG00000020163	gfi1ab	61	52.632	Seriola_lalandi_dorsalis
ENSAMXG00000015228	-	95	45.367	ENSSPAG00000009140	gfi1ab	100	45.367	Stegastes_partitus
ENSAMXG00000015228	-	54	63.158	ENSTGUG00000006060	GFI1	61	62.791	Taeniopygia_guttata
ENSAMXG00000015228	-	58	61.749	ENSTNIG00000000651	gfi1ab	51	61.749	Tetraodon_nigroviridis
ENSAMXG00000015228	-	51	82.883	ENSUMAG00000011251	-	82	82.883	Ursus_maritimus
ENSAMXG00000015228	-	96	62.921	ENSXETG00000023006	gfi1	98	62.921	Xenopus_tropicalis
ENSAMXG00000015228	-	51	83.178	ENSXCOG00000009186	-	86	83.178	Xiphophorus_couchianus
ENSAMXG00000015228	-	96	44.548	ENSXMAG00000006527	-	99	44.548	Xiphophorus_maculatus