EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015286 (Gene tree)
Gene ID: 103037442
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 12831 bases
Position: chr17:15395991-15408821
Accession: 103037442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015743	RIO1	PF01163.22	5.2e-76	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000015743	-	2296	XM_022679083	ENSAMXP00000015743	577 (aa)	XP_022534804	W5L7D1

Gene Model

Click here to download ENSAMXG00000015286's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015286's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015286	riok1	51	44.262	ENSAMXG00000015617	riok3	60	44.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015286	riok1	84	75.911	ENSG00000124784	RIOK1	99	68.096	Homo_sapiens
ENSAMXG00000015286	riok1	55	72.100	ENSAPOG00000015632	riok1	99	72.100	Acanthochromis_polyacanthus
ENSAMXG00000015286	riok1	99	69.363	ENSAMEG00000017367	RIOK1	99	69.416	Ailuropoda_melanoleuca
ENSAMXG00000015286	riok1	85	77.485	ENSACIG00000003735	riok1	89	76.471	Amphilophus_citrinellus
ENSAMXG00000015286	riok1	99	69.808	ENSAOCG00000011818	riok1	100	70.332	Amphiprion_ocellaris
ENSAMXG00000015286	riok1	99	69.686	ENSAPEG00000001345	riok1	100	70.280	Amphiprion_percula
ENSAMXG00000015286	riok1	79	78.337	ENSATEG00000006594	riok1	99	78.337	Anabas_testudineus
ENSAMXG00000015286	riok1	81	77.167	ENSAPLG00000004196	RIOK1	100	76.907	Anas_platyrhynchos
ENSAMXG00000015286	riok1	99	68.576	ENSACAG00000000695	RIOK1	99	68.804	Anolis_carolinensis
ENSAMXG00000015286	riok1	99	59.075	ENSANAG00000023777	RIOK1	99	60.206	Aotus_nancymaae
ENSAMXG00000015286	riok1	98	70.455	ENSACLG00000015799	riok1	99	70.332	Astatotilapia_calliptera
ENSAMXG00000015286	riok1	83	75.000	ENSBTAG00000013821	RIOK1	99	66.667	Bos_taurus
ENSAMXG00000015286	riok1	88	45.224	WBGene00019698	riok-1	85	48.043	Caenorhabditis_elegans
ENSAMXG00000015286	riok1	99	67.979	ENSCJAG00000042960	RIOK1	99	68.276	Callithrix_jacchus
ENSAMXG00000015286	riok1	84	75.709	ENSCAFG00000009563	RIOK1	99	68.739	Canis_familiaris
ENSAMXG00000015286	riok1	78	74.891	ENSCAFG00020013233	RIOK1	86	71.486	Canis_lupus_dingo
ENSAMXG00000015286	riok1	99	65.870	ENSCHIG00000001534	RIOK1	99	66.151	Capra_hircus
ENSAMXG00000015286	riok1	64	73.016	ENSTSYG00000011368	RIOK1	100	73.476	Carlito_syrichta
ENSAMXG00000015286	riok1	77	75.221	ENSCAPG00000008489	RIOK1	100	74.207	Cavia_aperea
ENSAMXG00000015286	riok1	96	67.668	ENSCPOG00000009882	RIOK1	99	67.802	Cavia_porcellus
ENSAMXG00000015286	riok1	85	74.701	ENSCCAG00000024061	RIOK1	99	68.136	Cebus_capucinus
ENSAMXG00000015286	riok1	82	76.812	ENSCATG00000001548	RIOK1	99	68.448	Cercocebus_atys
ENSAMXG00000015286	riok1	99	68.103	ENSCLAG00000003522	RIOK1	99	68.675	Chinchilla_lanigera
ENSAMXG00000015286	riok1	79	75.055	ENSCSAG00000007396	RIOK1	89	71.343	Chlorocebus_sabaeus
ENSAMXG00000015286	riok1	62	84.615	ENSCHOG00000001873	RIOK1	64	84.615	Choloepus_hoffmanni
ENSAMXG00000015286	riok1	85	72.581	ENSCPBG00000008685	RIOK1	82	71.774	Chrysemys_picta_bellii
ENSAMXG00000015286	riok1	84	76.113	ENSCANG00000032919	RIOK1	99	68.503	Colobus_angolensis_palliatus
ENSAMXG00000015286	riok1	91	70.275	ENSCGRG00001018868	Riok1	99	66.782	Cricetulus_griseus_chok1gshd
ENSAMXG00000015286	riok1	91	70.275	ENSCGRG00000008015	Riok1	99	66.782	Cricetulus_griseus_crigri
ENSAMXG00000015286	riok1	85	53.386	ENSCSEG00000015014	riok1	88	53.493	Cynoglossus_semilaevis
ENSAMXG00000015286	riok1	55	68.750	ENSCVAG00000011291	riok1	99	67.812	Cyprinodon_variegatus
ENSAMXG00000015286	riok1	99	76.399	ENSDARG00000016399	riok1	100	76.522	Danio_rerio
ENSAMXG00000015286	riok1	99	68.158	ENSDNOG00000015813	RIOK1	99	67.402	Dasypus_novemcinctus
ENSAMXG00000015286	riok1	99	70.294	ENSDORG00000008530	Riok1	99	69.558	Dipodomys_ordii
ENSAMXG00000015286	riok1	79	54.060	FBgn0036187	RIOK1	81	51.521	Drosophila_melanogaster
ENSAMXG00000015286	riok1	99	67.128	ENSETEG00000020273	RIOK1	99	66.897	Echinops_telfairi
ENSAMXG00000015286	riok1	84	66.255	ENSEBUG00000013672	riok1	87	65.988	Eptatretus_burgeri
ENSAMXG00000015286	riok1	76	76.818	ENSEASG00005012032	RIOK1	85	71.944	Equus_asinus_asinus
ENSAMXG00000015286	riok1	84	75.407	ENSECAG00000009007	RIOK1	99	68.966	Equus_caballus
ENSAMXG00000015286	riok1	73	65.882	ENSEEUG00000007123	RIOK1	90	68.434	Erinaceus_europaeus
ENSAMXG00000015286	riok1	99	71.256	ENSELUG00000017029	riok1	99	73.380	Esox_lucius
ENSAMXG00000015286	riok1	99	67.591	ENSFCAG00000027290	RIOK1	99	68.631	Felis_catus
ENSAMXG00000015286	riok1	99	69.031	ENSFALG00000013244	RIOK1	99	69.618	Ficedula_albicollis
ENSAMXG00000015286	riok1	99	68.213	ENSFDAG00000019139	RIOK1	99	67.470	Fukomys_damarensis
ENSAMXG00000015286	riok1	67	80.563	ENSFHEG00000021419	riok1	98	70.940	Fundulus_heteroclitus
ENSAMXG00000015286	riok1	71	76.998	ENSGMOG00000018668	riok1	95	76.886	Gadus_morhua
ENSAMXG00000015286	riok1	56	72.000	ENSGALG00000012795	RIOK1	100	72.923	Gallus_gallus
ENSAMXG00000015286	riok1	81	64.756	ENSGAFG00000004091	riok1	79	63.907	Gambusia_affinis
ENSAMXG00000015286	riok1	95	69.078	ENSGACG00000002496	riok1	95	76.626	Gasterosteus_aculeatus
ENSAMXG00000015286	riok1	81	72.516	ENSGAGG00000002262	RIOK1	96	72.516	Gopherus_agassizii
ENSAMXG00000015286	riok1	84	63.115	ENSGGOG00000011037	RIOK1	78	71.154	Gorilla_gorilla
ENSAMXG00000015286	riok1	99	67.073	ENSHGLG00000008699	RIOK1	99	66.957	Heterocephalus_glaber_female
ENSAMXG00000015286	riok1	99	67.422	ENSHGLG00100008188	RIOK1	99	67.304	Heterocephalus_glaber_male
ENSAMXG00000015286	riok1	85	74.494	ENSHCOG00000013275	riok1	91	73.523	Hippocampus_comes
ENSAMXG00000015286	riok1	99	80.245	ENSIPUG00000003290	riok1	100	80.769	Ictalurus_punctatus
ENSAMXG00000015286	riok1	99	67.747	ENSSTOG00000009289	RIOK1	99	68.268	Ictidomys_tridecemlineatus
ENSAMXG00000015286	riok1	84	75.610	ENSJJAG00000015152	Riok1	99	67.770	Jaculus_jaculus
ENSAMXG00000015286	riok1	67	77.892	ENSKMAG00000019378	riok1	100	78.205	Kryptolebias_marmoratus
ENSAMXG00000015286	riok1	85	78.788	ENSLBEG00000016650	riok1	87	78.745	Labrus_bergylta
ENSAMXG00000015286	riok1	99	62.153	ENSLACG00000000300	RIOK1	99	62.653	Latimeria_chalumnae
ENSAMXG00000015286	riok1	99	72.917	ENSLOCG00000011728	riok1	98	72.125	Lepisosteus_oculatus
ENSAMXG00000015286	riok1	99	68.858	ENSLAFG00000005504	RIOK1	99	68.237	Loxodonta_africana
ENSAMXG00000015286	riok1	84	75.758	ENSMFAG00000029990	RIOK1	99	69.019	Macaca_fascicularis
ENSAMXG00000015286	riok1	84	75.556	ENSMMUG00000015577	RIOK1	99	68.847	Macaca_mulatta
ENSAMXG00000015286	riok1	84	72.929	ENSMNEG00000034396	RIOK1	97	70.947	Macaca_nemestrina
ENSAMXG00000015286	riok1	82	77.019	ENSMLEG00000026327	RIOK1	99	69.019	Mandrillus_leucophaeus
ENSAMXG00000015286	riok1	98	70.723	ENSMAMG00000019557	riok1	99	71.831	Mastacembelus_armatus
ENSAMXG00000015286	riok1	98	70.629	ENSMZEG00005019482	riok1	99	70.506	Maylandia_zebra
ENSAMXG00000015286	riok1	99	70.157	ENSMGAG00000003816	RIOK1	99	71.080	Meleagris_gallopavo
ENSAMXG00000015286	riok1	99	67.418	ENSMAUG00000012751	Riok1	99	67.244	Mesocricetus_auratus
ENSAMXG00000015286	riok1	99	67.462	ENSMICG00000044301	RIOK1	83	69.363	Microcebus_murinus
ENSAMXG00000015286	riok1	99	67.241	ENSMOCG00000017032	Riok1	99	66.494	Microtus_ochrogaster
ENSAMXG00000015286	riok1	81	68.725	ENSMMOG00000020598	riok1	87	69.124	Mola_mola
ENSAMXG00000015286	riok1	99	69.031	ENSMODG00000009964	RIOK1	99	67.067	Monodelphis_domestica
ENSAMXG00000015286	riok1	85	67.944	ENSMALG00000019982	riok1	91	69.502	Monopterus_albus
ENSAMXG00000015286	riok1	99	66.265	MGP_CAROLIEiJ_G0018439	Riok1	99	66.090	Mus_caroli
ENSAMXG00000015286	riok1	99	66.609	ENSMUSG00000021428	Riok1	99	66.263	Mus_musculus
ENSAMXG00000015286	riok1	99	65.577	MGP_PahariEiJ_G0019507	Riok1	99	65.398	Mus_pahari
ENSAMXG00000015286	riok1	99	67.418	MGP_SPRETEiJ_G0019319	Riok1	99	66.839	Mus_spretus
ENSAMXG00000015286	riok1	99	67.647	ENSMPUG00000000570	RIOK1	99	68.394	Mustela_putorius_furo
ENSAMXG00000015286	riok1	84	76.171	ENSMLUG00000015312	RIOK1	99	69.377	Myotis_lucifugus
ENSAMXG00000015286	riok1	99	67.121	ENSNGAG00000021734	Riok1	99	67.301	Nannospalax_galili
ENSAMXG00000015286	riok1	68	84.343	ENSNBRG00000017489	riok1	76	84.343	Neolamprologus_brichardi
ENSAMXG00000015286	riok1	99	61.419	ENSNLEG00000011621	RIOK1	99	61.672	Nomascus_leucogenys
ENSAMXG00000015286	riok1	71	60.841	ENSMEUG00000006679	-	72	60.912	Notamacropus_eugenii
ENSAMXG00000015286	riok1	64	73.514	ENSOPRG00000009524	RIOK1	99	73.514	Ochotona_princeps
ENSAMXG00000015286	riok1	71	60.244	ENSODEG00000005663	RIOK1	98	60.097	Octodon_degus
ENSAMXG00000015286	riok1	98	72.759	ENSONIG00000014010	riok1	99	71.228	Oreochromis_niloticus
ENSAMXG00000015286	riok1	79	77.204	ENSOANG00000012553	RIOK1	100	75.687	Ornithorhynchus_anatinus
ENSAMXG00000015286	riok1	99	65.529	ENSOCUG00000011824	RIOK1	99	66.212	Oryctolagus_cuniculus
ENSAMXG00000015286	riok1	98	71.404	ENSORLG00000008221	riok1	99	71.404	Oryzias_latipes
ENSAMXG00000015286	riok1	98	69.312	ENSORLG00020013838	riok1	70	68.254	Oryzias_latipes_hni
ENSAMXG00000015286	riok1	99	70.761	ENSORLG00015009817	riok1	99	70.017	Oryzias_latipes_hsok
ENSAMXG00000015286	riok1	99	69.671	ENSOMEG00000002758	riok1	90	69.844	Oryzias_melastigma
ENSAMXG00000015286	riok1	99	63.240	ENSOGAG00000010192	RIOK1	99	63.066	Otolemur_garnettii
ENSAMXG00000015286	riok1	99	67.121	ENSOARG00000017747	RIOK1	99	66.838	Ovis_aries
ENSAMXG00000015286	riok1	84	66.667	ENSPPAG00000016349	RIOK1	100	70.427	Pan_paniscus
ENSAMXG00000015286	riok1	99	67.647	ENSPPRG00000001932	RIOK1	99	68.339	Panthera_pardus
ENSAMXG00000015286	riok1	99	67.820	ENSPTIG00000018545	RIOK1	99	68.512	Panthera_tigris_altaica
ENSAMXG00000015286	riok1	84	75.556	ENSPTRG00000017700	RIOK1	99	68.268	Pan_troglodytes
ENSAMXG00000015286	riok1	84	75.758	ENSPANG00000016522	RIOK1	99	69.019	Papio_anubis
ENSAMXG00000015286	riok1	99	71.007	ENSPKIG00000006442	riok1	100	71.354	Paramormyrops_kingsleyae
ENSAMXG00000015286	riok1	84	76.316	ENSPSIG00000006488	RIOK1	97	70.312	Pelodiscus_sinensis
ENSAMXG00000015286	riok1	68	74.365	ENSPMGG00000017807	riok1	96	70.195	Periophthalmus_magnuspinnatus
ENSAMXG00000015286	riok1	91	70.370	ENSPEMG00000017844	Riok1	99	67.358	Peromyscus_maniculatus_bairdii
ENSAMXG00000015286	riok1	72	67.696	ENSPMAG00000006351	riok1	98	68.409	Petromyzon_marinus
ENSAMXG00000015286	riok1	75	76.322	ENSPCIG00000012653	RIOK1	86	71.169	Phascolarctos_cinereus
ENSAMXG00000015286	riok1	98	64.550	ENSPFOG00000011532	riok1	100	64.049	Poecilia_formosa
ENSAMXG00000015286	riok1	98	64.550	ENSPLAG00000001341	riok1	100	64.049	Poecilia_latipinna
ENSAMXG00000015286	riok1	98	64.550	ENSPMEG00000007710	riok1	100	64.049	Poecilia_mexicana
ENSAMXG00000015286	riok1	85	70.143	ENSPREG00000009237	riok1	99	63.428	Poecilia_reticulata
ENSAMXG00000015286	riok1	84	76.113	ENSPPYG00000016207	RIOK1	99	68.439	Pongo_abelii
ENSAMXG00000015286	riok1	99	59.689	ENSPCAG00000007892	RIOK1	99	59.931	Procavia_capensis
ENSAMXG00000015286	riok1	99	67.470	ENSPVAG00000014091	RIOK1	99	68.041	Pteropus_vampyrus
ENSAMXG00000015286	riok1	56	75.542	ENSPNYG00000004465	riok1	100	75.776	Pundamilia_nyererei
ENSAMXG00000015286	riok1	100	83.362	ENSPNAG00000015435	riok1	100	83.709	Pygocentrus_nattereri
ENSAMXG00000015286	riok1	99	66.838	ENSRNOG00000014049	Riok1	100	73.978	Rattus_norvegicus
ENSAMXG00000015286	riok1	99	67.179	ENSRBIG00000036685	RIOK1	99	67.637	Rhinopithecus_bieti
ENSAMXG00000015286	riok1	99	67.350	ENSRROG00000036611	RIOK1	99	67.808	Rhinopithecus_roxellana
ENSAMXG00000015286	riok1	58	40.921	YOR119C	RIO1	96	37.074	Saccharomyces_cerevisiae
ENSAMXG00000015286	riok1	99	67.121	ENSSBOG00000012588	RIOK1	99	68.503	Saimiri_boliviensis_boliviensis
ENSAMXG00000015286	riok1	70	78.484	ENSSHAG00000003091	RIOK1	92	70.040	Sarcophilus_harrisii
ENSAMXG00000015286	riok1	84	81.224	ENSSFOG00015001035	riok1	99	75.131	Scleropages_formosus
ENSAMXG00000015286	riok1	56	71.963	ENSSDUG00000007291	riok1	100	70.405	Seriola_dumerili
ENSAMXG00000015286	riok1	98	71.958	ENSSLDG00000017657	riok1	99	70.899	Seriola_lalandi_dorsalis
ENSAMXG00000015286	riok1	83	65.560	ENSSPUG00000007624	RIOK1	83	65.560	Sphenodon_punctatus
ENSAMXG00000015286	riok1	99	70.506	ENSSPAG00000022710	riok1	100	70.855	Stegastes_partitus
ENSAMXG00000015286	riok1	99	65.338	ENSSSCG00000001024	RIOK1	99	65.744	Sus_scrofa
ENSAMXG00000015286	riok1	84	76.626	ENSTGUG00000002331	RIOK1	99	69.444	Taeniopygia_guttata
ENSAMXG00000015286	riok1	50	66.096	ENSTRUG00000001575	-	100	64.527	Takifugu_rubripes
ENSAMXG00000015286	riok1	72	65.952	ENSTRUG00000002854	riok1	94	66.319	Takifugu_rubripes
ENSAMXG00000015286	riok1	98	62.697	ENSTNIG00000003078	riok1	98	62.697	Tetraodon_nigroviridis
ENSAMXG00000015286	riok1	99	65.744	ENSTBEG00000016730	RIOK1	99	64.626	Tupaia_belangeri
ENSAMXG00000015286	riok1	67	80.670	ENSTTRG00000017335	RIOK1	81	80.670	Tursiops_truncatus
ENSAMXG00000015286	riok1	93	68.081	ENSUAMG00000003721	RIOK1	87	72.000	Ursus_americanus
ENSAMXG00000015286	riok1	99	69.191	ENSUMAG00000018461	RIOK1	99	69.244	Ursus_maritimus
ENSAMXG00000015286	riok1	58	81.702	ENSVPAG00000010813	-	52	86.111	Vicugna_pacos
ENSAMXG00000015286	riok1	84	75.304	ENSVVUG00000005018	RIOK1	99	68.394	Vulpes_vulpes
ENSAMXG00000015286	riok1	85	71.227	ENSXETG00000020436	riok1	88	70.243	Xenopus_tropicalis
ENSAMXG00000015286	riok1	81	67.591	ENSXCOG00000000245	riok1	100	67.377	Xiphophorus_couchianus
ENSAMXG00000015286	riok1	71	72.330	ENSXMAG00000014572	riok1	81	71.942	Xiphophorus_maculatus