EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015314 (Gene tree)
Gene ID: 103035993
Gene Symbol: rreb1b
Alias: si:ch211-279l9.6|si:ch211-279l9.7
Full Name: ras-responsive element-binding protein 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 15380 bases
Position: chr17:15413857-15429236
Accession: 103035993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	1	7
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	2	7
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	3	7
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	4	7
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	5	7
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	6	7
ENSAMXP00000015768	zf-C2H2	PF00096.26	3.6e-35	7	7
ENSAMXP00000015768	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000015768	-	4914	XM_015602099	ENSAMXP00000015768	1637 (aa)	XP_015457585	W5L7F6

Gene Model

Click here to download ENSAMXG00000015314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015314	rreb1b	96	47.012	ENSAMXG00000019028	rreb1a	94	48.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015314	rreb1b	96	43.486	ENSG00000124782	RREB1	76	73.600	Homo_sapiens
ENSAMXG00000015314	rreb1b	96	43.202	ENSAPLG00000004726	RREB1	94	43.042	Anas_platyrhynchos
ENSAMXG00000015314	rreb1b	92	45.526	ENSACAG00000000520	RREB1	93	44.866	Anolis_carolinensis
ENSAMXG00000015314	rreb1b	77	96.667	ENSANAG00000029040	RREB1	89	62.712	Aotus_nancymaae
ENSAMXG00000015314	rreb1b	93	43.878	ENSCJAG00000021358	RREB1	93	45.794	Callithrix_jacchus
ENSAMXG00000015314	rreb1b	96	43.404	ENSCAFG00000009527	RREB1	94	50.000	Canis_familiaris
ENSAMXG00000015314	rreb1b	96	42.066	ENSCAFG00020013260	RREB1	94	42.608	Canis_lupus_dingo
ENSAMXG00000015314	rreb1b	93	43.837	ENSCCAG00000021905	RREB1	92	46.018	Cebus_capucinus
ENSAMXG00000015314	rreb1b	94	43.508	ENSCATG00000043662	RREB1	93	45.836	Cercocebus_atys
ENSAMXG00000015314	rreb1b	94	43.718	ENSCSAG00000007376	RREB1	94	43.612	Chlorocebus_sabaeus
ENSAMXG00000015314	rreb1b	97	45.093	ENSCPBG00000008709	RREB1	97	45.259	Chrysemys_picta_bellii
ENSAMXG00000015314	rreb1b	94	43.402	ENSCANG00000032835	RREB1	93	46.000	Colobus_angolensis_palliatus
ENSAMXG00000015314	rreb1b	93	49.057	ENSCSEG00000018342	rreb1a	84	49.057	Cynoglossus_semilaevis
ENSAMXG00000015314	rreb1b	99	49.553	ENSDARG00000063701	rreb1a	99	63.033	Danio_rerio
ENSAMXG00000015314	rreb1b	95	43.324	ENSDORG00000006979	Rreb1	97	47.273	Dipodomys_ordii
ENSAMXG00000015314	rreb1b	92	44.209	ENSEASG00005012054	RREB1	90	44.696	Equus_asinus_asinus
ENSAMXG00000015314	rreb1b	92	43.783	ENSECAG00000018169	RREB1	95	43.637	Equus_caballus
ENSAMXG00000015314	rreb1b	93	43.447	ENSFALG00000013231	RREB1	90	43.232	Ficedula_albicollis
ENSAMXG00000015314	rreb1b	73	50.980	ENSFDAG00000004213	RREB1	51	32.828	Fukomys_damarensis
ENSAMXG00000015314	rreb1b	97	42.341	ENSGALG00000012799	RREB1	94	42.573	Gallus_gallus
ENSAMXG00000015314	rreb1b	94	49.020	ENSGAGG00000002213	RREB1	97	49.020	Gopherus_agassizii
ENSAMXG00000015314	rreb1b	95	43.697	ENSGGOG00000004561	RREB1	94	45.646	Gorilla_gorilla
ENSAMXG00000015314	rreb1b	73	68.539	ENSLBEG00000013512	rreb1a	91	49.539	Labrus_bergylta
ENSAMXG00000015314	rreb1b	94	46.371	ENSLACG00000009283	RREB1	96	47.498	Latimeria_chalumnae
ENSAMXG00000015314	rreb1b	91	52.276	ENSLOCG00000011702	rreb1b	95	51.365	Lepisosteus_oculatus
ENSAMXG00000015314	rreb1b	97	42.507	ENSLAFG00000005300	RREB1	96	42.922	Loxodonta_africana
ENSAMXG00000015314	rreb1b	94	43.613	ENSMFAG00000000389	RREB1	93	45.981	Macaca_fascicularis
ENSAMXG00000015314	rreb1b	94	43.782	ENSMMUG00000007852	RREB1	93	45.981	Macaca_mulatta
ENSAMXG00000015314	rreb1b	94	43.613	ENSMNEG00000038556	RREB1	93	45.981	Macaca_nemestrina
ENSAMXG00000015314	rreb1b	94	43.500	ENSMLEG00000040965	RREB1	93	45.909	Mandrillus_leucophaeus
ENSAMXG00000015314	rreb1b	96	43.388	ENSMGAG00000003910	RREB1	94	42.950	Meleagris_gallopavo
ENSAMXG00000015314	rreb1b	94	43.180	ENSMICG00000003683	RREB1	93	45.830	Microcebus_murinus
ENSAMXG00000015314	rreb1b	94	44.183	ENSMODG00000009892	RREB1	93	44.204	Monodelphis_domestica
ENSAMXG00000015314	rreb1b	93	46.552	ENSMPUG00000000558	RREB1	91	46.552	Mustela_putorius_furo
ENSAMXG00000015314	rreb1b	76	47.059	ENSMLUG00000013153	RREB1	94	42.354	Myotis_lucifugus
ENSAMXG00000015314	rreb1b	95	43.009	ENSNGAG00000021506	Rreb1	95	43.131	Nannospalax_galili
ENSAMXG00000015314	rreb1b	53	60.638	ENSNBRG00000016744	rreb1a	85	58.511	Neolamprologus_brichardi
ENSAMXG00000015314	rreb1b	95	42.906	ENSNLEG00000011554	RREB1	89	56.923	Nomascus_leucogenys
ENSAMXG00000015314	rreb1b	94	44.522	ENSMEUG00000015377	RREB1	94	43.851	Notamacropus_eugenii
ENSAMXG00000015314	rreb1b	85	50.980	ENSOPRG00000001966	RREB1	83	50.980	Ochotona_princeps
ENSAMXG00000015314	rreb1b	71	50.980	ENSODEG00000007124	RREB1	94	39.543	Octodon_degus
ENSAMXG00000015314	rreb1b	90	52.941	ENSOMEG00000001389	rreb1a	90	52.941	Oryzias_melastigma
ENSAMXG00000015314	rreb1b	96	39.967	ENSOGAG00000025755	RREB1	95	40.607	Otolemur_garnettii
ENSAMXG00000015314	rreb1b	95	43.567	ENSPPAG00000037017	RREB1	94	45.692	Pan_paniscus
ENSAMXG00000015314	rreb1b	96	42.785	ENSPPRG00000012144	RREB1	95	43.078	Panthera_pardus
ENSAMXG00000015314	rreb1b	95	43.510	ENSPTRG00000017697	RREB1	94	45.619	Pan_troglodytes
ENSAMXG00000015314	rreb1b	94	43.500	ENSPANG00000019553	RREB1	93	45.981	Papio_anubis
ENSAMXG00000015314	rreb1b	94	50.377	ENSPKIG00000006372	rreb1b	92	50.062	Paramormyrops_kingsleyae
ENSAMXG00000015314	rreb1b	97	42.991	ENSPSIG00000006582	RREB1	96	43.121	Pelodiscus_sinensis
ENSAMXG00000015314	rreb1b	94	43.169	ENSPEMG00000014153	Rreb1	94	43.201	Peromyscus_maniculatus_bairdii
ENSAMXG00000015314	rreb1b	93	49.020	ENSPCIG00000012644	RREB1	93	49.020	Phascolarctos_cinereus
ENSAMXG00000015314	rreb1b	95	43.026	ENSPPYG00000016204	RREB1	95	43.525	Pongo_abelii
ENSAMXG00000015314	rreb1b	96	43.208	ENSPCOG00000014821	RREB1	91	50.980	Propithecus_coquereli
ENSAMXG00000015314	rreb1b	93	43.750	ENSPVAG00000014081	RREB1	91	43.750	Pteropus_vampyrus
ENSAMXG00000015314	rreb1b	97	50.642	ENSPNAG00000000486	rreb1a	89	50.623	Pygocentrus_nattereri
ENSAMXG00000015314	rreb1b	97	42.715	ENSRNOG00000015701	Rreb1	96	43.017	Rattus_norvegicus
ENSAMXG00000015314	rreb1b	94	43.115	ENSRROG00000039603	RREB1	93	45.752	Rhinopithecus_roxellana
ENSAMXG00000015314	rreb1b	97	42.494	ENSSBOG00000025257	RREB1	94	46.205	Saimiri_boliviensis_boliviensis
ENSAMXG00000015314	rreb1b	94	42.105	ENSSHAG00000005295	RREB1	92	53.846	Sarcophilus_harrisii
ENSAMXG00000015314	rreb1b	92	54.719	ENSSFOG00015001117	rreb1b	93	54.289	Scleropages_formosus
ENSAMXG00000015314	rreb1b	93	44.000	ENSSPUG00000007686	RREB1	93	44.672	Sphenodon_punctatus
ENSAMXG00000015314	rreb1b	96	43.269	ENSTGUG00000002309	RREB1	97	44.267	Taeniopygia_guttata
ENSAMXG00000015314	rreb1b	92	43.941	ENSUAMG00000003741	RREB1	94	43.119	Ursus_americanus
ENSAMXG00000015314	rreb1b	92	49.020	ENSVVUG00000005050	RREB1	94	43.575	Vulpes_vulpes
ENSAMXG00000015314	rreb1b	96	40.885	ENSXETG00000015435	rreb1	96	41.220	Xenopus_tropicalis