EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000015469 (Gene tree)
Gene ID: 103026160
Gene Symbol: -
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1B-A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 25842 bases
Position: chr6:33328570-33354411
Accession: 103026160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015925	RRM_1	PF00076.22	4e-10	1	1
ENSAMXP00000051758	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048637	-	5778	-	ENSAMXP00000051758	1609 (aa)	-	-
ENSAMXT00000015925	-	5670	XM_022670521	ENSAMXP00000015925	1725 (aa)	XP_022526242	W5L7W3

Gene Model

Click here to download ENSAMXG00000015469's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015469	-	71	55.294	ENSELUG00000022712	-	50	51.176	Esox_lucius
ENSAMXG00000015469	-	52	51.042	ENSGAFG00000009083	-	57	49.306	Gambusia_affinis
ENSAMXG00000015469	-	100	55.093	ENSIPUG00000003992	-	99	54.607	Ictalurus_punctatus
ENSAMXG00000015469	-	58	52.805	ENSIPUG00000024741	setd1b	62	54.545	Ictalurus_punctatus