EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015470 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9106 bases
Position: chr6:8270671-8279776
Accession: 103035450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000015933	ResIII	PF04851.15	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000015933	-	2136	XM_022671098	ENSAMXP00000015933	711 (aa)	XP_022526819	W5L7X1

Gene Model

Click here to download ENSAMXG00000015470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015470	smarcad1a	73	37.143	ENSAMXG00000011227	smarca1	50	36.820
ENSAMXG00000015470	smarcad1a	69	30.502	ENSAMXG00000039985	rad54b	67	30.502
ENSAMXG00000015470	smarcad1a	70	35.539	ENSAMXG00000002088	hells	76	35.539
ENSAMXG00000015470	smarcad1a	90	71.205	ENSAMXG00000019130	smarcad1b	74	67.770

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015470	smarcad1a	99	60.251	ENSG00000163104	SMARCAD1	100	65.436	Homo_sapiens
ENSAMXG00000015470	smarcad1a	93	73.353	ENSAPOG00000011446	smarcad1a	69	68.579	Acanthochromis_polyacanthus
ENSAMXG00000015470	smarcad1a	98	60.955	ENSAMEG00000005844	SMARCAD1	69	60.955	Ailuropoda_melanoleuca
ENSAMXG00000015470	smarcad1a	91	72.050	ENSACIG00000018326	smarcad1a	97	76.604	Amphilophus_citrinellus
ENSAMXG00000015470	smarcad1a	93	73.952	ENSAOCG00000019762	smarcad1a	63	73.952	Amphiprion_ocellaris
ENSAMXG00000015470	smarcad1a	93	73.802	ENSAPEG00000003889	smarcad1a	63	73.802	Amphiprion_percula
ENSAMXG00000015470	smarcad1a	95	70.864	ENSATEG00000015608	smarcad1a	67	70.864	Anabas_testudineus
ENSAMXG00000015470	smarcad1a	91	64.079	ENSAPLG00000004630	SMARCAD1	73	61.582	Anas_platyrhynchos
ENSAMXG00000015470	smarcad1a	93	61.169	ENSACAG00000013554	SMARCAD1	69	58.475	Anolis_carolinensis
ENSAMXG00000015470	smarcad1a	99	60.501	ENSANAG00000020488	SMARCAD1	79	60.501	Aotus_nancymaae
ENSAMXG00000015470	smarcad1a	94	71.214	ENSACLG00000017063	smarcad1a	64	71.214	Astatotilapia_calliptera
ENSAMXG00000015470	smarcad1a	99	60.083	ENSBTAG00000017061	SMARCAD1	70	60.083	Bos_taurus
ENSAMXG00000015470	smarcad1a	90	40.549	WBGene00010845	M03C11.8	68	40.176	Caenorhabditis_elegans
ENSAMXG00000015470	smarcad1a	99	60.362	ENSCJAG00000006778	SMARCAD1	70	60.362	Callithrix_jacchus
ENSAMXG00000015470	smarcad1a	98	60.815	ENSCAFG00000010026	SMARCAD1	69	60.815	Canis_familiaris
ENSAMXG00000015470	smarcad1a	98	60.815	ENSCAFG00020003994	SMARCAD1	80	60.815	Canis_lupus_dingo
ENSAMXG00000015470	smarcad1a	99	60.251	ENSCHIG00000012905	SMARCAD1	70	60.251	Capra_hircus
ENSAMXG00000015470	smarcad1a	99	60.251	ENSTSYG00000002706	SMARCAD1	70	60.251	Carlito_syrichta
ENSAMXG00000015470	smarcad1a	97	53.648	ENSCAPG00000016744	SMARCAD1	77	53.362	Cavia_aperea
ENSAMXG00000015470	smarcad1a	99	60.391	ENSCPOG00000011398	SMARCAD1	69	60.391	Cavia_porcellus
ENSAMXG00000015470	smarcad1a	99	60.362	ENSCCAG00000022264	SMARCAD1	100	65.436	Cebus_capucinus
ENSAMXG00000015470	smarcad1a	99	60.251	ENSCATG00000035663	SMARCAD1	81	60.251	Cercocebus_atys
ENSAMXG00000015470	smarcad1a	99	60.251	ENSCSAG00000004186	SMARCAD1	85	60.251	Chlorocebus_sabaeus
ENSAMXG00000015470	smarcad1a	95	62.774	ENSCPBG00000013203	SMARCAD1	66	62.774	Chrysemys_picta_bellii
ENSAMXG00000015470	smarcad1a	91	48.407	ENSCING00000001688	-	99	48.187	Ciona_intestinalis
ENSAMXG00000015470	smarcad1a	99	60.251	ENSCANG00000003556	SMARCAD1	100	65.436	Colobus_angolensis_palliatus
ENSAMXG00000015470	smarcad1a	98	60.815	ENSCGRG00001015056	Smarcad1	70	60.815	Cricetulus_griseus_chok1gshd
ENSAMXG00000015470	smarcad1a	98	60.815	ENSCGRG00000014087	Smarcad1	70	60.815	Cricetulus_griseus_crigri
ENSAMXG00000015470	smarcad1a	99	67.044	ENSCSEG00000014419	-	70	67.327	Cynoglossus_semilaevis
ENSAMXG00000015470	smarcad1a	99	67.989	ENSCSEG00000017903	smarcad1a	66	67.989	Cynoglossus_semilaevis
ENSAMXG00000015470	smarcad1a	89	81.761	ENSDARG00000014041	smarcad1a	71	77.633	Danio_rerio
ENSAMXG00000015470	smarcad1a	92	69.572	ENSDARG00000073721	smarcad1b	74	66.291	Danio_rerio
ENSAMXG00000015470	smarcad1a	99	60.809	ENSDNOG00000000806	-	70	60.809	Dasypus_novemcinctus
ENSAMXG00000015470	smarcad1a	98	60.986	ENSDORG00000012331	Smarcad1	69	60.986	Dipodomys_ordii
ENSAMXG00000015470	smarcad1a	89	44.068	FBgn0032157	Etl1	80	43.465	Drosophila_melanogaster
ENSAMXG00000015470	smarcad1a	88	44.201	ENSEBUG00000003969	smarcad1a	99	44.076	Eptatretus_burgeri
ENSAMXG00000015470	smarcad1a	99	60.669	ENSEASG00005012382	SMARCAD1	80	58.611	Equus_asinus_asinus
ENSAMXG00000015470	smarcad1a	99	60.669	ENSECAG00000011562	SMARCAD1	70	60.669	Equus_caballus
ENSAMXG00000015470	smarcad1a	94	72.633	ENSELUG00000018535	smarcad1a	68	70.959	Esox_lucius
ENSAMXG00000015470	smarcad1a	97	64.689	ENSELUG00000019154	smarcad1b	70	64.783	Esox_lucius
ENSAMXG00000015470	smarcad1a	98	61.236	ENSFCAG00000003958	SMARCAD1	100	65.604	Felis_catus
ENSAMXG00000015470	smarcad1a	99	60.504	ENSFALG00000006089	SMARCAD1	70	60.504	Ficedula_albicollis
ENSAMXG00000015470	smarcad1a	92	63.056	ENSFDAG00000017027	SMARCAD1	66	63.150	Fukomys_damarensis
ENSAMXG00000015470	smarcad1a	94	71.194	ENSFHEG00000012778	smarcad1a	66	68.303	Fundulus_heteroclitus
ENSAMXG00000015470	smarcad1a	92	71.429	ENSGMOG00000018995	smarcad1a	78	70.896	Gadus_morhua
ENSAMXG00000015470	smarcad1a	97	59.654	ENSGALG00000037339	SMARCAD1	83	59.366	Gallus_gallus
ENSAMXG00000015470	smarcad1a	88	73.927	ENSGAFG00000013498	smarcad1a	60	73.927	Gambusia_affinis
ENSAMXG00000015470	smarcad1a	94	70.210	ENSGACG00000007327	smarcad1a	79	68.723	Gasterosteus_aculeatus
ENSAMXG00000015470	smarcad1a	95	62.482	ENSGAGG00000008582	SMARCAD1	66	62.482	Gopherus_agassizii
ENSAMXG00000015470	smarcad1a	99	60.251	ENSGGOG00000023001	SMARCAD1	70	60.251	Gorilla_gorilla
ENSAMXG00000015470	smarcad1a	94	71.514	ENSHBUG00000011042	smarcad1a	62	71.514	Haplochromis_burtoni
ENSAMXG00000015470	smarcad1a	92	63.056	ENSHGLG00000005070	SMARCAD1	65	63.150	Heterocephalus_glaber_female
ENSAMXG00000015470	smarcad1a	92	63.056	ENSHGLG00100006812	SMARCAD1	65	63.150	Heterocephalus_glaber_male
ENSAMXG00000015470	smarcad1a	89	70.644	ENSHCOG00000007848	smarcad1a	61	68.311	Hippocampus_comes
ENSAMXG00000015470	smarcad1a	99	78.911	ENSIPUG00000000242	smarcad1a	72	81.188	Ictalurus_punctatus
ENSAMXG00000015470	smarcad1a	92	69.419	ENSIPUG00000022817	smarcad1b	70	69.419	Ictalurus_punctatus
ENSAMXG00000015470	smarcad1a	99	60.391	ENSSTOG00000001227	SMARCAD1	70	60.391	Ictidomys_tridecemlineatus
ENSAMXG00000015470	smarcad1a	98	60.784	ENSJJAG00000022342	Smarcad1	69	60.784	Jaculus_jaculus
ENSAMXG00000015470	smarcad1a	89	72.162	ENSKMAG00000021351	smarcad1a	60	72.162	Kryptolebias_marmoratus
ENSAMXG00000015470	smarcad1a	92	72.496	ENSLBEG00000008088	smarcad1a	64	72.496	Labrus_bergylta
ENSAMXG00000015470	smarcad1a	91	70.462	ENSLOCG00000012909	smarcad1a	72	66.809	Lepisosteus_oculatus
ENSAMXG00000015470	smarcad1a	99	59.414	ENSLAFG00000000040	SMARCAD1	70	59.414	Loxodonta_africana
ENSAMXG00000015470	smarcad1a	99	60.251	ENSMFAG00000042606	SMARCAD1	81	60.251	Macaca_fascicularis
ENSAMXG00000015470	smarcad1a	99	60.251	ENSMMUG00000022242	SMARCAD1	81	60.251	Macaca_mulatta
ENSAMXG00000015470	smarcad1a	99	60.251	ENSMNEG00000038117	SMARCAD1	100	65.436	Macaca_nemestrina
ENSAMXG00000015470	smarcad1a	99	60.251	ENSMLEG00000038333	SMARCAD1	100	65.436	Mandrillus_leucophaeus
ENSAMXG00000015470	smarcad1a	98	69.307	ENSMAMG00000000933	smarcad1a	67	69.307	Mastacembelus_armatus
ENSAMXG00000015470	smarcad1a	94	71.214	ENSMZEG00005005203	smarcad1a	64	71.214	Maylandia_zebra
ENSAMXG00000015470	smarcad1a	88	62.264	ENSMGAG00000005577	SMARCAD1	66	62.264	Meleagris_gallopavo
ENSAMXG00000015470	smarcad1a	98	60.278	ENSMAUG00000008417	Smarcad1	70	60.278	Mesocricetus_auratus
ENSAMXG00000015470	smarcad1a	94	62.704	ENSMICG00000009746	SMARCAD1	65	62.704	Microcebus_murinus
ENSAMXG00000015470	smarcad1a	98	61.345	ENSMOCG00000017142	Smarcad1	70	61.345	Microtus_ochrogaster
ENSAMXG00000015470	smarcad1a	99	69.078	ENSMMOG00000000275	smarcad1a	93	71.001	Mola_mola
ENSAMXG00000015470	smarcad1a	93	62.891	ENSMODG00000019268	SMARCAD1	65	62.444	Monodelphis_domestica
ENSAMXG00000015470	smarcad1a	98	61.517	MGP_CAROLIEiJ_G0028458	-	57	61.517	Mus_caroli
ENSAMXG00000015470	smarcad1a	98	61.376	ENSMUSG00000029920	Smarcad1	70	61.376	Mus_musculus
ENSAMXG00000015470	smarcad1a	98	61.376	MGP_PahariEiJ_G0022198	Smarcad1	70	61.376	Mus_pahari
ENSAMXG00000015470	smarcad1a	98	61.376	MGP_SPRETEiJ_G0029462	Smarcad1	70	61.376	Mus_spretus
ENSAMXG00000015470	smarcad1a	98	60.955	ENSMPUG00000002111	SMARCAD1	69	60.955	Mustela_putorius_furo
ENSAMXG00000015470	smarcad1a	94	62.908	ENSMLUG00000000425	SMARCAD1	66	62.908	Myotis_lucifugus
ENSAMXG00000015470	smarcad1a	98	60.845	ENSNGAG00000000810	Smarcad1	70	60.845	Nannospalax_galili
ENSAMXG00000015470	smarcad1a	92	70.846	ENSNBRG00000012749	smarcad1a	82	68.006	Neolamprologus_brichardi
ENSAMXG00000015470	smarcad1a	99	60.251	ENSNLEG00000014225	SMARCAD1	100	65.436	Nomascus_leucogenys
ENSAMXG00000015470	smarcad1a	99	60.112	ENSODEG00000004334	SMARCAD1	70	60.112	Octodon_degus
ENSAMXG00000015470	smarcad1a	90	72.713	ENSONIG00000015059	smarcad1a	74	68.732	Oreochromis_niloticus
ENSAMXG00000015470	smarcad1a	91	64.438	ENSOANG00000013764	SMARCAD1	86	61.268	Ornithorhynchus_anatinus
ENSAMXG00000015470	smarcad1a	99	60.391	ENSOCUG00000017283	SMARCAD1	70	60.391	Oryctolagus_cuniculus
ENSAMXG00000015470	smarcad1a	92	72.796	ENSORLG00000004869	smarcad1a	65	70.690	Oryzias_latipes
ENSAMXG00000015470	smarcad1a	92	72.796	ENSORLG00020020569	smarcad1a	65	70.690	Oryzias_latipes_hni
ENSAMXG00000015470	smarcad1a	92	72.644	ENSORLG00015009045	smarcad1a	65	70.546	Oryzias_latipes_hsok
ENSAMXG00000015470	smarcad1a	92	73.242	ENSOMEG00000023032	smarcad1a	66	70.690	Oryzias_melastigma
ENSAMXG00000015470	smarcad1a	98	60.364	ENSOGAG00000011444	SMARCAD1	69	60.364	Otolemur_garnettii
ENSAMXG00000015470	smarcad1a	99	60.251	ENSOARG00000017851	SMARCAD1	70	60.251	Ovis_aries
ENSAMXG00000015470	smarcad1a	99	60.251	ENSPPAG00000035715	SMARCAD1	70	60.251	Pan_paniscus
ENSAMXG00000015470	smarcad1a	98	61.236	ENSPPRG00000024756	SMARCAD1	100	65.604	Panthera_pardus
ENSAMXG00000015470	smarcad1a	98	61.204	ENSPTIG00000017868	SMARCAD1	69	61.204	Panthera_tigris_altaica
ENSAMXG00000015470	smarcad1a	99	60.251	ENSPTRG00000023126	SMARCAD1	100	65.436	Pan_troglodytes
ENSAMXG00000015470	smarcad1a	99	58.889	ENSPANG00000019757	SMARCAD1	70	58.889	Papio_anubis
ENSAMXG00000015470	smarcad1a	94	63.299	ENSPSIG00000010255	SMARCAD1	65	63.299	Pelodiscus_sinensis
ENSAMXG00000015470	smarcad1a	89	69.423	ENSPMGG00000010735	smarcad1a	97	65.948	Periophthalmus_magnuspinnatus
ENSAMXG00000015470	smarcad1a	98	54.008	ENSPEMG00000001854	Smarcad1	70	54.008	Peromyscus_maniculatus_bairdii
ENSAMXG00000015470	smarcad1a	98	52.712	ENSPMAG00000003516	smarcad1a	71	52.712	Petromyzon_marinus
ENSAMXG00000015470	smarcad1a	99	60.335	ENSPCIG00000008137	SMARCAD1	94	59.914	Phascolarctos_cinereus
ENSAMXG00000015470	smarcad1a	91	72.393	ENSPFOG00000019116	smarcad1a	63	69.811	Poecilia_formosa
ENSAMXG00000015470	smarcad1a	91	72.546	ENSPLAG00000000108	smarcad1a	63	69.956	Poecilia_latipinna
ENSAMXG00000015470	smarcad1a	91	72.393	ENSPMEG00000009155	smarcad1a	63	69.811	Poecilia_mexicana
ENSAMXG00000015470	smarcad1a	98	69.429	ENSPREG00000018185	smarcad1a	71	69.429	Poecilia_reticulata
ENSAMXG00000015470	smarcad1a	99	59.861	ENSPPYG00000014935	SMARCAD1	70	59.861	Pongo_abelii
ENSAMXG00000015470	smarcad1a	99	52.028	ENSPCOG00000020478	SMARCAD1	80	52.028	Propithecus_coquereli
ENSAMXG00000015470	smarcad1a	94	62.687	ENSPVAG00000001760	SMARCAD1	65	62.687	Pteropus_vampyrus
ENSAMXG00000015470	smarcad1a	97	68.052	ENSPNYG00000010087	smarcad1a	83	68.006	Pundamilia_nyererei
ENSAMXG00000015470	smarcad1a	99	83.144	ENSPNAG00000001663	smarcad1a	72	83.144	Pygocentrus_nattereri
ENSAMXG00000015470	smarcad1a	92	69.474	ENSPNAG00000010099	smarcad1b	71	69.552	Pygocentrus_nattereri
ENSAMXG00000015470	smarcad1a	98	61.798	ENSRNOG00000006391	Smarcad1	69	61.798	Rattus_norvegicus
ENSAMXG00000015470	smarcad1a	99	60.251	ENSRBIG00000041989	SMARCAD1	70	60.251	Rhinopithecus_bieti
ENSAMXG00000015470	smarcad1a	99	60.251	ENSRROG00000035309	SMARCAD1	70	60.251	Rhinopithecus_roxellana
ENSAMXG00000015470	smarcad1a	99	60.362	ENSSBOG00000032114	SMARCAD1	100	65.436	Saimiri_boliviensis_boliviensis
ENSAMXG00000015470	smarcad1a	93	63.189	ENSSHAG00000001279	SMARCAD1	65	62.742	Sarcophilus_harrisii
ENSAMXG00000015470	smarcad1a	94	72.239	ENSSFOG00015016814	smarcad1b	70	69.014	Scleropages_formosus
ENSAMXG00000015470	smarcad1a	98	68.317	ENSSFOG00015020909	smarcad1a	89	70.458	Scleropages_formosus
ENSAMXG00000015470	smarcad1a	99	68.750	ENSSMAG00000001326	smarcad1a	65	69.460	Scophthalmus_maximus
ENSAMXG00000015470	smarcad1a	99	69.460	ENSSDUG00000022338	smarcad1a	84	69.460	Seriola_dumerili
ENSAMXG00000015470	smarcad1a	99	68.750	ENSSLDG00000024986	smarcad1a	66	68.750	Seriola_lalandi_dorsalis
ENSAMXG00000015470	smarcad1a	83	64.706	ENSSPUG00000004633	SMARCAD1	99	64.706	Sphenodon_punctatus
ENSAMXG00000015470	smarcad1a	93	73.802	ENSSPAG00000001970	smarcad1a	63	73.802	Stegastes_partitus
ENSAMXG00000015470	smarcad1a	99	60.530	ENSSSCG00000009193	SMARCAD1	85	60.530	Sus_scrofa
ENSAMXG00000015470	smarcad1a	99	60.109	ENSTGUG00000003127	SMARCAD1	93	60.246	Taeniopygia_guttata
ENSAMXG00000015470	smarcad1a	98	68.661	ENSTNIG00000017585	smarcad1a	79	69.099	Tetraodon_nigroviridis
ENSAMXG00000015470	smarcad1a	80	68.849	ENSTBEG00000002789	SMARCAD1	56	68.849	Tupaia_belangeri
ENSAMXG00000015470	smarcad1a	99	60.167	ENSTTRG00000000226	SMARCAD1	72	60.167	Tursiops_truncatus
ENSAMXG00000015470	smarcad1a	98	60.955	ENSUAMG00000022262	SMARCAD1	74	60.838	Ursus_americanus
ENSAMXG00000015470	smarcad1a	98	60.955	ENSUMAG00000004549	SMARCAD1	69	60.955	Ursus_maritimus
ENSAMXG00000015470	smarcad1a	98	60.955	ENSVVUG00000007271	SMARCAD1	85	60.955	Vulpes_vulpes
ENSAMXG00000015470	smarcad1a	94	58.247	ENSXETG00000019214	smarcad1	82	55.447	Xenopus_tropicalis
ENSAMXG00000015470	smarcad1a	95	68.429	ENSXCOG00000005232	smarcad1a	83	68.657	Xiphophorus_couchianus
ENSAMXG00000015470	smarcad1a	98	68.429	ENSXMAG00000015350	smarcad1a	64	68.429	Xiphophorus_maculatus