EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015601 (Gene tree)
Gene ID: 103039930
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7844 bases
Position: chr13:34331303-34339146
Accession: 103039930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016054	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016054	-	708	XM_007253282	ENSAMXP00000016054	235 (aa)	XP_007253344	W5L892

Gene Model

Click here to download ENSAMXG00000015601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015601	-	76	36.047	ENSAMXG00000010474	msi2b	91	36.047
ENSAMXG00000015601	-	96	66.228	ENSAMXG00000038120	rbm38	81	71.579
ENSAMXG00000015601	-	54	38.710	ENSAMXG00000024951	-	62	38.710
ENSAMXG00000015601	-	94	62.931	ENSAMXG00000040572	rbm24a	100	64.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015601	-	95	67.391	ENSG00000132819	RBM38	94	87.288	Homo_sapiens
ENSAMXG00000015601	-	100	76.471	ENSAPOG00000009939	-	100	78.689	Acanthochromis_polyacanthus
ENSAMXG00000015601	-	100	61.446	ENSAPOG00000003301	rbm38	98	61.044	Acanthochromis_polyacanthus
ENSAMXG00000015601	-	100	77.869	ENSACIG00000012502	-	100	94.068	Amphilophus_citrinellus
ENSAMXG00000015601	-	100	61.600	ENSACIG00000000010	rbm38	98	61.600	Amphilophus_citrinellus
ENSAMXG00000015601	-	99	72.996	ENSAOCG00000012559	RBM38	100	78.481	Amphiprion_ocellaris
ENSAMXG00000015601	-	100	61.446	ENSAOCG00000013497	-	98	61.044	Amphiprion_ocellaris
ENSAMXG00000015601	-	100	61.446	ENSAPEG00000013137	rbm38	98	61.044	Amphiprion_percula
ENSAMXG00000015601	-	100	74.180	ENSAPEG00000023581	-	100	77.869	Amphiprion_percula
ENSAMXG00000015601	-	100	77.869	ENSATEG00000016710	-	100	79.918	Anabas_testudineus
ENSAMXG00000015601	-	97	65.086	ENSATEG00000016366	rbm38	97	65.086	Anabas_testudineus
ENSAMXG00000015601	-	95	67.249	ENSACAG00000016238	RBM38	95	62.249	Anolis_carolinensis
ENSAMXG00000015601	-	94	67.686	ENSANAG00000031959	RBM38	82	91.089	Aotus_nancymaae
ENSAMXG00000015601	-	100	79.098	ENSACLG00000019514	-	100	79.098	Astatotilapia_calliptera
ENSAMXG00000015601	-	95	67.391	ENSBTAG00000008105	RBM38	91	66.522	Bos_taurus
ENSAMXG00000015601	-	55	66.154	WBGene00006321	sup-12	77	66.142	Caenorhabditis_elegans
ENSAMXG00000015601	-	95	67.826	ENSCJAG00000019139	RBM38	82	91.089	Callithrix_jacchus
ENSAMXG00000015601	-	95	70.000	ENSCAFG00020021943	RBM38	91	69.130	Canis_lupus_dingo
ENSAMXG00000015601	-	95	66.957	ENSCHIG00000002609	RBM38	91	66.234	Capra_hircus
ENSAMXG00000015601	-	95	67.826	ENSCPOG00000012781	RBM38	91	66.957	Cavia_porcellus
ENSAMXG00000015601	-	95	67.826	ENSCCAG00000036872	RBM38	82	91.089	Cebus_capucinus
ENSAMXG00000015601	-	95	67.391	ENSCATG00000032133	RBM38	82	91.089	Cercocebus_atys
ENSAMXG00000015601	-	95	67.391	ENSCLAG00000005906	RBM38	82	74.211	Chinchilla_lanigera
ENSAMXG00000015601	-	95	67.391	ENSCSAG00000015503	RBM38	91	66.234	Chlorocebus_sabaeus
ENSAMXG00000015601	-	92	71.171	ENSCPBG00000024059	RBM38	99	68.142	Chrysemys_picta_bellii
ENSAMXG00000015601	-	66	62.733	ENSCING00000025102	-	71	62.195	Ciona_intestinalis
ENSAMXG00000015601	-	63	63.871	ENSCSAVG00000001132	-	62	62.805	Ciona_savignyi
ENSAMXG00000015601	-	94	50.885	ENSCANG00000030105	-	79	50.661	Colobus_angolensis_palliatus
ENSAMXG00000015601	-	97	64.530	ENSCGRG00001012928	Rbm38	93	64.957	Cricetulus_griseus_chok1gshd
ENSAMXG00000015601	-	81	63.731	ENSCSEG00000020943	rbm38	63	63.731	Cynoglossus_semilaevis
ENSAMXG00000015601	-	100	75.820	ENSCSEG00000004701	-	100	77.273	Cynoglossus_semilaevis
ENSAMXG00000015601	-	100	78.689	ENSCVAG00000005472	-	100	77.869	Cyprinodon_variegatus
ENSAMXG00000015601	-	99	60.081	ENSCVAG00000015952	rbm38	98	60.000	Cyprinodon_variegatus
ENSAMXG00000015601	-	99	71.610	ENSDARG00000058818	rbm38	100	71.610	Danio_rerio
ENSAMXG00000015601	-	94	69.163	ENSDNOG00000032004	RBM38	100	67.841	Dasypus_novemcinctus
ENSAMXG00000015601	-	95	66.957	ENSECAG00000007700	RBM38	91	66.234	Equus_caballus
ENSAMXG00000015601	-	95	66.234	ENSEEUG00000013489	RBM38	91	67.965	Erinaceus_europaeus
ENSAMXG00000015601	-	100	78.512	ENSELUG00000005849	-	100	78.099	Esox_lucius
ENSAMXG00000015601	-	91	66.960	ENSELUG00000000585	-	84	73.575	Esox_lucius
ENSAMXG00000015601	-	95	68.696	ENSFCAG00000042916	RBM38	82	90.099	Felis_catus
ENSAMXG00000015601	-	71	75.882	ENSFALG00000010805	RBM38	92	73.333	Ficedula_albicollis
ENSAMXG00000015601	-	100	76.987	ENSFHEG00000006160	-	100	77.824	Fundulus_heteroclitus
ENSAMXG00000015601	-	100	59.363	ENSFHEG00000017748	rbm38	98	59.363	Fundulus_heteroclitus
ENSAMXG00000015601	-	76	80.435	ENSGMOG00000016655	-	98	85.326	Gadus_morhua
ENSAMXG00000015601	-	92	69.369	ENSGALG00000026081	RBM38	99	67.699	Gallus_gallus
ENSAMXG00000015601	-	94	65.179	ENSGACG00000015224	rbm38	87	74.033	Gasterosteus_aculeatus
ENSAMXG00000015601	-	94	75.893	ENSGACG00000009873	-	100	75.893	Gasterosteus_aculeatus
ENSAMXG00000015601	-	92	71.171	ENSGAGG00000001187	RBM38	99	68.142	Gopherus_agassizii
ENSAMXG00000015601	-	100	79.098	ENSHBUG00000011778	-	100	79.098	Haplochromis_burtoni
ENSAMXG00000015601	-	100	61.200	ENSHBUG00000012058	rbm38	98	61.200	Haplochromis_burtoni
ENSAMXG00000015601	-	95	65.217	ENSHGLG00000015077	RBM38	91	66.522	Heterocephalus_glaber_female
ENSAMXG00000015601	-	79	57.297	ENSHCOG00000019040	rbm38	74	57.297	Hippocampus_comes
ENSAMXG00000015601	-	86	82.126	ENSHCOG00000005622	-	60	83.092	Hippocampus_comes
ENSAMXG00000015601	-	100	84.388	ENSIPUG00000019349	-	100	80.591	Ictalurus_punctatus
ENSAMXG00000015601	-	91	55.085	ENSKMAG00000012402	rbm38	98	55.652	Kryptolebias_marmoratus
ENSAMXG00000015601	-	100	62.000	ENSLBEG00000018878	rbm38	98	62.000	Labrus_bergylta
ENSAMXG00000015601	-	100	77.311	ENSLBEG00000016163	RBM38	100	78.151	Labrus_bergylta
ENSAMXG00000015601	-	100	77.731	ENSLOCG00000003456	rbm38	100	77.447	Lepisosteus_oculatus
ENSAMXG00000015601	-	95	67.391	ENSMFAG00000043808	RBM38	82	91.089	Macaca_fascicularis
ENSAMXG00000015601	-	95	67.391	ENSMMUG00000031391	RBM38	82	91.089	Macaca_mulatta
ENSAMXG00000015601	-	95	67.391	ENSMNEG00000034683	RBM38	82	91.089	Macaca_nemestrina
ENSAMXG00000015601	-	100	76.230	ENSMAMG00000020499	RBM38	100	78.279	Mastacembelus_armatus
ENSAMXG00000015601	-	100	62.000	ENSMAMG00000024135	rbm38	98	61.200	Mastacembelus_armatus
ENSAMXG00000015601	-	100	79.098	ENSMZEG00005000849	-	100	79.098	Maylandia_zebra
ENSAMXG00000015601	-	100	61.200	ENSMZEG00005026036	rbm38	98	61.200	Maylandia_zebra
ENSAMXG00000015601	-	97	66.667	ENSMAUG00000021211	Rbm38	93	67.094	Mesocricetus_auratus
ENSAMXG00000015601	-	94	68.122	ENSMICG00000038011	RBM38	100	67.391	Microcebus_murinus
ENSAMXG00000015601	-	97	65.957	ENSMOCG00000008715	Rbm38	94	64.854	Microtus_ochrogaster
ENSAMXG00000015601	-	100	75.820	ENSMMOG00000020051	-	100	77.459	Mola_mola
ENSAMXG00000015601	-	100	66.393	ENSMODG00000016458	RBM38	100	64.113	Monodelphis_domestica
ENSAMXG00000015601	-	100	56.723	ENSMALG00000022327	rbm38	72	70.588	Monopterus_albus
ENSAMXG00000015601	-	79	87.234	ENSMALG00000004680	RBM38	72	87.234	Monopterus_albus
ENSAMXG00000015601	-	97	64.255	MGP_CAROLIEiJ_G0024745	Rbm38	94	65.532	Mus_caroli
ENSAMXG00000015601	-	97	64.255	ENSMUSG00000027510	Rbm38	94	65.532	Mus_musculus
ENSAMXG00000015601	-	97	63.830	MGP_PahariEiJ_G0026186	Rbm38	94	65.106	Mus_pahari
ENSAMXG00000015601	-	97	63.830	MGP_SPRETEiJ_G0025665	Rbm38	94	65.106	Mus_spretus
ENSAMXG00000015601	-	76	75.269	ENSMPUG00000006518	RBM38	94	73.958	Mustela_putorius_furo
ENSAMXG00000015601	-	94	65.502	ENSMLUG00000011140	RBM38	100	66.087	Myotis_lucifugus
ENSAMXG00000015601	-	100	79.098	ENSNBRG00000022545	-	100	79.098	Neolamprologus_brichardi
ENSAMXG00000015601	-	100	61.600	ENSNBRG00000022685	rbm38	98	61.600	Neolamprologus_brichardi
ENSAMXG00000015601	-	55	71.642	ENSMEUG00000005475	-	100	71.642	Notamacropus_eugenii
ENSAMXG00000015601	-	95	67.391	ENSODEG00000007980	RBM38	91	66.522	Octodon_degus
ENSAMXG00000015601	-	99	61.446	ENSONIG00000017073	rbm38	100	61.446	Oreochromis_niloticus
ENSAMXG00000015601	-	99	79.012	ENSONIG00000020324	-	100	79.012	Oreochromis_niloticus
ENSAMXG00000015601	-	92	67.873	ENSOANG00000009259	RBM38	81	66.667	Ornithorhynchus_anatinus
ENSAMXG00000015601	-	100	71.545	ENSORLG00000027180	-	100	74.390	Oryzias_latipes
ENSAMXG00000015601	-	100	56.574	ENSORLG00000012154	rbm38	98	56.972	Oryzias_latipes
ENSAMXG00000015601	-	100	58.964	ENSORLG00020017871	rbm38	98	58.964	Oryzias_latipes_hni
ENSAMXG00000015601	-	100	71.545	ENSORLG00020020751	-	100	74.390	Oryzias_latipes_hni
ENSAMXG00000015601	-	100	71.429	ENSORLG00015017040	-	100	74.694	Oryzias_latipes_hsok
ENSAMXG00000015601	-	100	57.371	ENSORLG00015012606	rbm38	98	58.566	Oryzias_latipes_hsok
ENSAMXG00000015601	-	96	60.581	ENSOMEG00000006805	rbm38	96	60.581	Oryzias_melastigma
ENSAMXG00000015601	-	100	71.721	ENSOMEG00000023912	-	100	75.820	Oryzias_melastigma
ENSAMXG00000015601	-	95	67.391	ENSOGAG00000029136	RBM38	90	66.522	Otolemur_garnettii
ENSAMXG00000015601	-	95	68.696	ENSPPRG00000009507	RBM38	82	90.099	Panthera_pardus
ENSAMXG00000015601	-	54	85.714	ENSPTRG00000045845	-	68	85.714	Pan_troglodytes
ENSAMXG00000015601	-	78	73.298	ENSPTRG00000013661	RBM38	82	91.089	Pan_troglodytes
ENSAMXG00000015601	-	93	53.778	ENSPANG00000033127	-	92	53.097	Papio_anubis
ENSAMXG00000015601	-	95	67.391	ENSPANG00000020919	-	82	91.089	Papio_anubis
ENSAMXG00000015601	-	100	73.029	ENSPKIG00000025417	rbm38	100	72.131	Paramormyrops_kingsleyae
ENSAMXG00000015601	-	100	72.385	ENSPKIG00000018122	-	95	90.090	Paramormyrops_kingsleyae
ENSAMXG00000015601	-	95	69.298	ENSPSIG00000011649	RBM38	93	67.241	Pelodiscus_sinensis
ENSAMXG00000015601	-	100	68.145	ENSPMGG00000017094	-	100	70.161	Periophthalmus_magnuspinnatus
ENSAMXG00000015601	-	99	56.855	ENSPMGG00000011343	rbm38	98	58.367	Periophthalmus_magnuspinnatus
ENSAMXG00000015601	-	100	66.803	ENSPCIG00000013648	RBM38	100	64.516	Phascolarctos_cinereus
ENSAMXG00000015601	-	100	57.874	ENSPFOG00000011658	rbm38	98	58.268	Poecilia_formosa
ENSAMXG00000015601	-	100	57.480	ENSPLAG00000005218	rbm38	98	57.874	Poecilia_latipinna
ENSAMXG00000015601	-	100	78.049	ENSPLAG00000002500	-	100	77.642	Poecilia_latipinna
ENSAMXG00000015601	-	100	57.874	ENSPMEG00000015770	rbm38	98	58.268	Poecilia_mexicana
ENSAMXG00000015601	-	100	57.874	ENSPREG00000007398	rbm38	98	58.268	Poecilia_reticulata
ENSAMXG00000015601	-	95	67.826	ENSPCOG00000026201	RBM38	81	91.089	Propithecus_coquereli
ENSAMXG00000015601	-	96	44.397	ENSPVAG00000006457	RBM38	92	44.828	Pteropus_vampyrus
ENSAMXG00000015601	-	100	79.098	ENSPNYG00000019727	-	100	94.915	Pundamilia_nyererei
ENSAMXG00000015601	-	100	60.800	ENSPNYG00000021373	rbm38	98	60.800	Pundamilia_nyererei
ENSAMXG00000015601	-	100	94.468	ENSPNAG00000015123	-	100	94.468	Pygocentrus_nattereri
ENSAMXG00000015601	-	96	72.247	ENSPNAG00000010596	rbm38	97	72.247	Pygocentrus_nattereri
ENSAMXG00000015601	-	97	66.809	ENSRNOG00000006420	Rbm38	94	65.532	Rattus_norvegicus
ENSAMXG00000015601	-	95	55.507	ENSRROG00000036388	-	90	54.825	Rhinopithecus_roxellana
ENSAMXG00000015601	-	94	67.686	ENSSBOG00000031053	RBM38	93	91.089	Saimiri_boliviensis_boliviensis
ENSAMXG00000015601	-	100	69.167	ENSSFOG00015004453	rbm38	100	72.727	Scleropages_formosus
ENSAMXG00000015601	-	100	63.200	ENSSDUG00000022611	rbm38	98	63.200	Seriola_dumerili
ENSAMXG00000015601	-	100	77.049	ENSSDUG00000021082	RBM38	100	79.098	Seriola_dumerili
ENSAMXG00000015601	-	100	77.869	ENSSLDG00000011778	RBM38	100	79.918	Seriola_lalandi_dorsalis
ENSAMXG00000015601	-	100	63.200	ENSSLDG00000010845	rbm38	98	63.200	Seriola_lalandi_dorsalis
ENSAMXG00000015601	-	100	62.800	ENSSPAG00000011113	rbm38	98	62.800	Stegastes_partitus
ENSAMXG00000015601	-	100	76.639	ENSSPAG00000020989	RBM38	100	79.098	Stegastes_partitus
ENSAMXG00000015601	-	95	68.261	ENSSSCG00000007504	RBM38	91	67.391	Sus_scrofa
ENSAMXG00000015601	-	100	73.878	ENSTRUG00000019869	-	100	74.694	Takifugu_rubripes
ENSAMXG00000015601	-	98	61.157	ENSTRUG00000024954	rbm38	97	60.331	Takifugu_rubripes
ENSAMXG00000015601	-	94	78.222	ENSTNIG00000007093	-	100	78.222	Tetraodon_nigroviridis
ENSAMXG00000015601	-	95	68.696	ENSUAMG00000019780	RBM38	91	67.826	Ursus_americanus
ENSAMXG00000015601	-	95	70.000	ENSVVUG00000017246	RBM38	91	69.130	Vulpes_vulpes
ENSAMXG00000015601	-	92	66.216	ENSXETG00000011268	rbm38	97	64.348	Xenopus_tropicalis
ENSAMXG00000015601	-	76	71.351	ENSXCOG00000017324	-	79	71.351	Xiphophorus_couchianus
ENSAMXG00000015601	-	100	58.800	ENSXMAG00000023662	rbm38	98	59.200	Xiphophorus_maculatus