EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000015683 (Gene tree)
Gene ID: 103042194
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10076 bases
Position: chr13:34215665-34225740
Accession: 103042194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016148	THUMP	PF02926.17	1.3e-11	1	1
ENSAMXP00000037801	THUMP	PF02926.17	1.3e-11	1	1
ENSAMXP00000016148	UPF0020	PF01170.18	2.3e-40	1	1
ENSAMXP00000037801	UPF0020	PF01170.18	2.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048648	-	2449	XM_007253290	ENSAMXP00000037801	475 (aa)	XP_007253352	UPI0003CD2483
ENSAMXT00000016148	-	1410	-	ENSAMXP00000016148	469 (aa)	-	W5L8I6

Gene Model

Click here to download ENSAMXG00000015683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015683	thumpd3	95	58.315	ENSG00000134077	THUMPD3	91	58.531	Homo_sapiens
ENSAMXG00000015683	thumpd3	96	73.799	ENSAPOG00000015836	thumpd3	93	73.799	Acanthochromis_polyacanthus
ENSAMXG00000015683	thumpd3	94	59.402	ENSAMEG00000011321	THUMPD3	93	59.149	Ailuropoda_melanoleuca
ENSAMXG00000015683	thumpd3	98	71.520	ENSACIG00000020096	thumpd3	93	71.734	Amphilophus_citrinellus
ENSAMXG00000015683	thumpd3	96	72.174	ENSAOCG00000004399	thumpd3	93	70.815	Amphiprion_ocellaris
ENSAMXG00000015683	thumpd3	98	72.222	ENSAPEG00000016740	thumpd3	93	72.222	Amphiprion_percula
ENSAMXG00000015683	thumpd3	98	72.451	ENSATEG00000005345	thumpd3	93	72.451	Anabas_testudineus
ENSAMXG00000015683	thumpd3	80	63.010	ENSAPLG00000003598	THUMPD3	99	62.341	Anas_platyrhynchos
ENSAMXG00000015683	thumpd3	93	61.263	ENSACAG00000014974	THUMPD3	92	61.895	Anolis_carolinensis
ENSAMXG00000015683	thumpd3	95	58.531	ENSANAG00000002365	THUMPD3	92	58.531	Aotus_nancymaae
ENSAMXG00000015683	thumpd3	87	49.279	ENSACLG00000013504	-	73	70.238	Astatotilapia_calliptera
ENSAMXG00000015683	thumpd3	98	71.888	ENSACLG00000023333	thumpd3	93	71.888	Astatotilapia_calliptera
ENSAMXG00000015683	thumpd3	96	59.831	ENSBTAG00000003112	THUMPD3	96	59.459	Bos_taurus
ENSAMXG00000015683	thumpd3	90	36.235	WBGene00010846	M04B2.2	98	36.111	Caenorhabditis_elegans
ENSAMXG00000015683	thumpd3	95	58.099	ENSCJAG00000015949	THUMPD3	92	58.963	Callithrix_jacchus
ENSAMXG00000015683	thumpd3	95	58.686	ENSCAFG00000005499	THUMPD3	93	58.686	Canis_familiaris
ENSAMXG00000015683	thumpd3	77	58.290	ENSCAFG00000008060	-	93	58.290	Canis_familiaris
ENSAMXG00000015683	thumpd3	95	58.686	ENSCAFG00020008895	-	93	58.686	Canis_lupus_dingo
ENSAMXG00000015683	thumpd3	85	58.057	ENSCAFG00020025887	-	97	58.057	Canis_lupus_dingo
ENSAMXG00000015683	thumpd3	96	58.628	ENSCHIG00000024037	THUMPD3	95	58.836	Capra_hircus
ENSAMXG00000015683	thumpd3	95	58.963	ENSTSYG00000000159	THUMPD3	92	58.963	Carlito_syrichta
ENSAMXG00000015683	thumpd3	90	40.995	ENSCAPG00000017486	THUMPD3	85	41.371	Cavia_aperea
ENSAMXG00000015683	thumpd3	95	58.621	ENSCPOG00000033287	THUMPD3	92	58.190	Cavia_porcellus
ENSAMXG00000015683	thumpd3	95	58.531	ENSCCAG00000027067	-	92	58.531	Cebus_capucinus
ENSAMXG00000015683	thumpd3	95	53.595	ENSCCAG00000021429	-	92	54.402	Cebus_capucinus
ENSAMXG00000015683	thumpd3	95	57.667	ENSCATG00000040999	THUMPD3	92	58.099	Cercocebus_atys
ENSAMXG00000015683	thumpd3	95	58.836	ENSCLAG00000000690	THUMPD3	92	58.836	Chinchilla_lanigera
ENSAMXG00000015683	thumpd3	95	57.883	ENSCSAG00000010753	THUMPD3	92	58.099	Chlorocebus_sabaeus
ENSAMXG00000015683	thumpd3	80	51.190	ENSCHOG00000012851	THUMPD3	76	51.190	Choloepus_hoffmanni
ENSAMXG00000015683	thumpd3	92	61.159	ENSCPBG00000014771	THUMPD3	91	61.159	Chrysemys_picta_bellii
ENSAMXG00000015683	thumpd3	92	41.570	ENSCSAVG00000008668	-	96	41.570	Ciona_savignyi
ENSAMXG00000015683	thumpd3	95	57.667	ENSCANG00000031901	THUMPD3	92	57.883	Colobus_angolensis_palliatus
ENSAMXG00000015683	thumpd3	96	59.110	ENSCGRG00001024117	Thumpd3	92	59.110	Cricetulus_griseus_chok1gshd
ENSAMXG00000015683	thumpd3	96	59.110	ENSCGRG00000018116	Thumpd3	92	59.110	Cricetulus_griseus_crigri
ENSAMXG00000015683	thumpd3	97	70.742	ENSCSEG00000002546	thumpd3	95	70.742	Cynoglossus_semilaevis
ENSAMXG00000015683	thumpd3	98	69.677	ENSCVAG00000001019	thumpd3	92	69.677	Cyprinodon_variegatus
ENSAMXG00000015683	thumpd3	99	68.182	ENSDARG00000059634	thumpd3	98	70.021	Danio_rerio
ENSAMXG00000015683	thumpd3	92	60.927	ENSDNOG00000047668	THUMPD3	88	60.659	Dasypus_novemcinctus
ENSAMXG00000015683	thumpd3	96	58.091	ENSDORG00000003257	Thumpd3	96	58.506	Dipodomys_ordii
ENSAMXG00000015683	thumpd3	60	58.033	ENSETEG00000020239	-	59	58.033	Echinops_telfairi
ENSAMXG00000015683	thumpd3	91	52.262	ENSEBUG00000004221	thumpd3	97	52.262	Eptatretus_burgeri
ENSAMXG00000015683	thumpd3	96	56.341	ENSEASG00005013327	THUMPD3	96	56.341	Equus_asinus_asinus
ENSAMXG00000015683	thumpd3	97	58.678	ENSECAG00000002016	THUMPD3	96	58.678	Equus_caballus
ENSAMXG00000015683	thumpd3	95	54.409	ENSEEUG00000014696	THUMPD3	95	53.236	Erinaceus_europaeus
ENSAMXG00000015683	thumpd3	93	74.924	ENSELUG00000018246	thumpd3	78	74.695	Esox_lucius
ENSAMXG00000015683	thumpd3	97	56.762	ENSFCAG00000006171	THUMPD3	93	57.684	Felis_catus
ENSAMXG00000015683	thumpd3	86	59.122	ENSFALG00000013631	THUMPD3	90	59.259	Ficedula_albicollis
ENSAMXG00000015683	thumpd3	95	59.052	ENSFDAG00000014825	THUMPD3	92	59.052	Fukomys_damarensis
ENSAMXG00000015683	thumpd3	98	70.701	ENSFHEG00000006006	thumpd3	93	70.913	Fundulus_heteroclitus
ENSAMXG00000015683	thumpd3	96	68.943	ENSGMOG00000007923	thumpd3	92	69.604	Gadus_morhua
ENSAMXG00000015683	thumpd3	92	60.215	ENSGALG00000044813	THUMPD3	96	59.205	Gallus_gallus
ENSAMXG00000015683	thumpd3	62	30.822	ENSGALG00000009119	THUMPD2	64	30.822	Gallus_gallus
ENSAMXG00000015683	thumpd3	98	71.678	ENSGAFG00000021645	thumpd3	93	70.851	Gambusia_affinis
ENSAMXG00000015683	thumpd3	98	68.522	ENSGACG00000000930	thumpd3	98	68.522	Gasterosteus_aculeatus
ENSAMXG00000015683	thumpd3	91	61.422	ENSGAGG00000022750	THUMPD3	90	61.422	Gopherus_agassizii
ENSAMXG00000015683	thumpd3	95	58.315	ENSGGOG00000000604	THUMPD3	91	58.531	Gorilla_gorilla
ENSAMXG00000015683	thumpd3	98	71.613	ENSHBUG00000013405	thumpd3	93	71.613	Haplochromis_burtoni
ENSAMXG00000015683	thumpd3	97	59.149	ENSHGLG00000016200	THUMPD3	93	58.723	Heterocephalus_glaber_female
ENSAMXG00000015683	thumpd3	97	59.023	ENSHGLG00100017321	-	93	58.811	Heterocephalus_glaber_male
ENSAMXG00000015683	thumpd3	91	52.477	ENSHGLG00100000505	-	91	52.703	Heterocephalus_glaber_male
ENSAMXG00000015683	thumpd3	97	71.367	ENSHCOG00000004871	thumpd3	96	71.367	Hippocampus_comes
ENSAMXG00000015683	thumpd3	99	84.731	ENSIPUG00000019415	THUMPD3	97	84.731	Ictalurus_punctatus
ENSAMXG00000015683	thumpd3	95	59.698	ENSSTOG00000003973	THUMPD3	92	59.698	Ictidomys_tridecemlineatus
ENSAMXG00000015683	thumpd3	97	54.449	ENSJJAG00000017751	Thumpd3	92	54.449	Jaculus_jaculus
ENSAMXG00000015683	thumpd3	98	72.113	ENSKMAG00000021025	thumpd3	88	72.113	Kryptolebias_marmoratus
ENSAMXG00000015683	thumpd3	98	72.009	ENSLBEG00000012252	thumpd3	93	72.009	Labrus_bergylta
ENSAMXG00000015683	thumpd3	95	61.895	ENSLACG00000018604	THUMPD3	92	61.895	Latimeria_chalumnae
ENSAMXG00000015683	thumpd3	97	61.723	ENSLOCG00000009800	thumpd3	95	63.675	Lepisosteus_oculatus
ENSAMXG00000015683	thumpd3	96	58.898	ENSLAFG00000005103	THUMPD3	93	59.958	Loxodonta_africana
ENSAMXG00000015683	thumpd3	95	57.883	ENSMFAG00000044884	THUMPD3	92	58.099	Macaca_fascicularis
ENSAMXG00000015683	thumpd3	95	57.883	ENSMMUG00000017307	THUMPD3	92	58.099	Macaca_mulatta
ENSAMXG00000015683	thumpd3	95	57.883	ENSMNEG00000030529	THUMPD3	92	58.099	Macaca_nemestrina
ENSAMXG00000015683	thumpd3	95	57.667	ENSMLEG00000032943	THUMPD3	92	58.315	Mandrillus_leucophaeus
ENSAMXG00000015683	thumpd3	97	70.306	ENSMAMG00000023934	thumpd3	93	70.306	Mastacembelus_armatus
ENSAMXG00000015683	thumpd3	98	71.888	ENSMZEG00005010623	thumpd3	93	71.888	Maylandia_zebra
ENSAMXG00000015683	thumpd3	82	61.905	ENSMGAG00000010182	THUMPD3	100	62.155	Meleagris_gallopavo
ENSAMXG00000015683	thumpd3	95	59.787	ENSMAUG00000012250	Thumpd3	95	58.763	Mesocricetus_auratus
ENSAMXG00000015683	thumpd3	92	56.466	ENSMICG00000010095	THUMPD3	89	57.112	Microcebus_murinus
ENSAMXG00000015683	thumpd3	95	60.000	ENSMOCG00000020148	Thumpd3	92	60.000	Microtus_ochrogaster
ENSAMXG00000015683	thumpd3	97	71.586	ENSMMOG00000021791	thumpd3	96	71.586	Mola_mola
ENSAMXG00000015683	thumpd3	96	57.500	ENSMODG00000004715	-	94	57.500	Monodelphis_domestica
ENSAMXG00000015683	thumpd3	93	70.023	ENSMALG00000017316	thumpd3	93	70.023	Monopterus_albus
ENSAMXG00000015683	thumpd3	55	56.159	MGP_CAROLIEiJ_G0028714	-	58	56.159	Mus_caroli
ENSAMXG00000015683	thumpd3	96	59.315	ENSMUSG00000030264	Thumpd3	92	59.315	Mus_musculus
ENSAMXG00000015683	thumpd3	95	60.000	MGP_PahariEiJ_G0022465	Thumpd3	92	60.000	Mus_pahari
ENSAMXG00000015683	thumpd3	96	59.529	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.529	Mus_spretus
ENSAMXG00000015683	thumpd3	94	59.091	ENSMPUG00000017066	-	92	58.836	Mustela_putorius_furo
ENSAMXG00000015683	thumpd3	94	53.696	ENSMPUG00000005219	-	92	53.696	Mustela_putorius_furo
ENSAMXG00000015683	thumpd3	95	57.962	ENSMLUG00000008538	THUMPD3	92	57.620	Myotis_lucifugus
ENSAMXG00000015683	thumpd3	95	58.887	ENSNGAG00000021014	-	93	58.887	Nannospalax_galili
ENSAMXG00000015683	thumpd3	97	49.469	ENSNGAG00000001549	-	96	49.578	Nannospalax_galili
ENSAMXG00000015683	thumpd3	98	71.459	ENSNBRG00000004886	thumpd3	93	71.459	Neolamprologus_brichardi
ENSAMXG00000015683	thumpd3	95	58.099	ENSNLEG00000003863	THUMPD3	92	58.531	Nomascus_leucogenys
ENSAMXG00000015683	thumpd3	84	58.738	ENSMEUG00000009819	THUMPD3	98	58.838	Notamacropus_eugenii
ENSAMXG00000015683	thumpd3	84	58.981	ENSOPRG00000002020	THUMPD3	98	59.124	Ochotona_princeps
ENSAMXG00000015683	thumpd3	72	58.475	ENSODEG00000018242	THUMPD3	100	57.627	Octodon_degus
ENSAMXG00000015683	thumpd3	98	72.198	ENSONIG00000018977	thumpd3	93	72.198	Oreochromis_niloticus
ENSAMXG00000015683	thumpd3	84	53.919	ENSOANG00000014481	THUMPD3	98	56.604	Ornithorhynchus_anatinus
ENSAMXG00000015683	thumpd3	95	60.171	ENSOCUG00000010921	THUMPD3	92	60.171	Oryctolagus_cuniculus
ENSAMXG00000015683	thumpd3	95	71.175	ENSORLG00000000676	thumpd3	91	71.175	Oryzias_latipes
ENSAMXG00000015683	thumpd3	69	30.946	ENSORLG00020018792	thumpd2	79	31.232	Oryzias_latipes_hni
ENSAMXG00000015683	thumpd3	95	71.397	ENSORLG00020007509	thumpd3	91	71.397	Oryzias_latipes_hni
ENSAMXG00000015683	thumpd3	95	71.397	ENSORLG00015003615	thumpd3	91	71.397	Oryzias_latipes_hsok
ENSAMXG00000015683	thumpd3	95	70.667	ENSOMEG00000014115	thumpd3	92	71.111	Oryzias_melastigma
ENSAMXG00000015683	thumpd3	83	57.039	ENSOGAG00000017111	THUMPD3	99	57.389	Otolemur_garnettii
ENSAMXG00000015683	thumpd3	95	59.322	ENSOARG00000007139	THUMPD3	91	59.534	Ovis_aries
ENSAMXG00000015683	thumpd3	95	58.099	ENSPPAG00000025852	THUMPD3	91	58.531	Pan_paniscus
ENSAMXG00000015683	thumpd3	96	58.887	ENSPPRG00000008071	THUMPD3	93	58.686	Panthera_pardus
ENSAMXG00000015683	thumpd3	96	58.887	ENSPTIG00000017923	THUMPD3	96	57.732	Panthera_tigris_altaica
ENSAMXG00000015683	thumpd3	95	58.099	ENSPTRG00000014585	THUMPD3	91	58.531	Pan_troglodytes
ENSAMXG00000015683	thumpd3	95	57.883	ENSPANG00000016253	THUMPD3	92	58.099	Papio_anubis
ENSAMXG00000015683	thumpd3	94	69.180	ENSPKIG00000014009	thumpd3	92	69.180	Paramormyrops_kingsleyae
ENSAMXG00000015683	thumpd3	91	59.827	ENSPSIG00000007370	THUMPD3	90	59.827	Pelodiscus_sinensis
ENSAMXG00000015683	thumpd3	94	70.946	ENSPMGG00000017563	thumpd3	93	70.946	Periophthalmus_magnuspinnatus
ENSAMXG00000015683	thumpd3	93	60.784	ENSPEMG00000022411	Thumpd3	90	60.784	Peromyscus_maniculatus_bairdii
ENSAMXG00000015683	thumpd3	96	53.027	ENSPMAG00000001291	thumpd3	98	56.054	Petromyzon_marinus
ENSAMXG00000015683	thumpd3	96	58.105	ENSPCIG00000002049	THUMPD3	93	59.368	Phascolarctos_cinereus
ENSAMXG00000015683	thumpd3	98	70.323	ENSPFOG00000002318	thumpd3	93	70.323	Poecilia_formosa
ENSAMXG00000015683	thumpd3	98	70.323	ENSPLAG00000014804	thumpd3	93	70.323	Poecilia_latipinna
ENSAMXG00000015683	thumpd3	98	70.323	ENSPMEG00000000582	thumpd3	93	70.323	Poecilia_mexicana
ENSAMXG00000015683	thumpd3	98	69.677	ENSPREG00000009176	thumpd3	93	69.677	Poecilia_reticulata
ENSAMXG00000015683	thumpd3	95	57.883	ENSPPYG00000029461	THUMPD3	92	58.315	Pongo_abelii
ENSAMXG00000015683	thumpd3	92	44.045	ENSPPYG00000017616	-	90	44.045	Pongo_abelii
ENSAMXG00000015683	thumpd3	85	58.473	ENSPCAG00000015398	THUMPD3	99	58.852	Procavia_capensis
ENSAMXG00000015683	thumpd3	82	54.591	ENSPCOG00000023618	-	92	54.591	Propithecus_coquereli
ENSAMXG00000015683	thumpd3	96	49.679	ENSPCOG00000018095	-	92	51.178	Propithecus_coquereli
ENSAMXG00000015683	thumpd3	97	57.851	ENSPVAG00000008721	THUMPD3	96	57.851	Pteropus_vampyrus
ENSAMXG00000015683	thumpd3	98	71.888	ENSPNYG00000006918	thumpd3	93	71.888	Pundamilia_nyererei
ENSAMXG00000015683	thumpd3	99	87.527	ENSPNAG00000014936	thumpd3	100	85.625	Pygocentrus_nattereri
ENSAMXG00000015683	thumpd3	96	58.140	ENSRNOG00000006941	Thumpd3	92	59.408	Rattus_norvegicus
ENSAMXG00000015683	thumpd3	94	58.261	ENSRBIG00000035954	THUMPD3	92	58.478	Rhinopithecus_bieti
ENSAMXG00000015683	thumpd3	94	58.261	ENSRROG00000035734	THUMPD3	92	58.478	Rhinopithecus_roxellana
ENSAMXG00000015683	thumpd3	95	58.225	ENSSBOG00000023567	THUMPD3	92	59.193	Saimiri_boliviensis_boliviensis
ENSAMXG00000015683	thumpd3	96	59.023	ENSSHAG00000014467	THUMPD3	93	59.149	Sarcophilus_harrisii
ENSAMXG00000015683	thumpd3	98	71.002	ENSSFOG00015019210	thumpd3	95	71.002	Scleropages_formosus
ENSAMXG00000015683	thumpd3	98	73.291	ENSSMAG00000000609	thumpd3	97	73.291	Scophthalmus_maximus
ENSAMXG00000015683	thumpd3	98	71.734	ENSSDUG00000012179	thumpd3	96	71.734	Seriola_dumerili
ENSAMXG00000015683	thumpd3	98	71.520	ENSSLDG00000022028	thumpd3	94	71.520	Seriola_lalandi_dorsalis
ENSAMXG00000015683	thumpd3	78	66.443	ENSSARG00000002239	THUMPD3	76	66.443	Sorex_araneus
ENSAMXG00000015683	thumpd3	92	60.814	ENSSPUG00000017461	THUMPD3	92	60.814	Sphenodon_punctatus
ENSAMXG00000015683	thumpd3	55	31.298	ENSSPUG00000006316	THUMPD2	58	31.298	Sphenodon_punctatus
ENSAMXG00000015683	thumpd3	98	72.458	ENSSPAG00000008345	thumpd3	92	72.458	Stegastes_partitus
ENSAMXG00000015683	thumpd3	97	58.436	ENSSSCG00000011542	THUMPD3	94	59.408	Sus_scrofa
ENSAMXG00000015683	thumpd3	91	60.938	ENSTGUG00000010440	THUMPD3	100	60.938	Taeniopygia_guttata
ENSAMXG00000015683	thumpd3	99	63.080	ENSTRUG00000004420	thumpd3	98	63.057	Takifugu_rubripes
ENSAMXG00000015683	thumpd3	97	70.861	ENSTNIG00000014627	thumpd3	98	70.861	Tetraodon_nigroviridis
ENSAMXG00000015683	thumpd3	94	54.545	ENSTBEG00000003450	THUMPD3	91	54.545	Tupaia_belangeri
ENSAMXG00000015683	thumpd3	94	59.267	ENSTTRG00000009694	THUMPD3	92	59.013	Tursiops_truncatus
ENSAMXG00000015683	thumpd3	97	58.264	ENSUAMG00000009412	THUMPD3	96	58.264	Ursus_americanus
ENSAMXG00000015683	thumpd3	97	59.657	ENSUMAG00000019241	THUMPD3	96	59.657	Ursus_maritimus
ENSAMXG00000015683	thumpd3	77	57.784	ENSVPAG00000002855	THUMPD3	91	57.784	Vicugna_pacos
ENSAMXG00000015683	thumpd3	95	58.686	ENSVVUG00000025278	THUMPD3	93	58.686	Vulpes_vulpes
ENSAMXG00000015683	thumpd3	94	59.914	ENSXETG00000001447	thumpd3	91	60.560	Xenopus_tropicalis
ENSAMXG00000015683	thumpd3	98	70.021	ENSXCOG00000000159	thumpd3	97	70.021	Xiphophorus_couchianus
ENSAMXG00000015683	thumpd3	98	70.000	ENSXMAG00000001423	thumpd3	93	70.000	Xiphophorus_maculatus