EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015890 (Gene tree)
Gene ID: 103027678
Gene Symbol: smpd5
Alias: Mitochondrial SMase|smpdm|zgc:153995
Full Name: sphingomyelin phosphodiesterase 5-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 17428 bases
Position: chrAPWO02002006.1:56986-74413
Accession: 103027678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016359	Exo_endo_phos	PF03372.23	1.3e-07	1	1
ENSAMXP00000036868	Exo_endo_phos	PF03372.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000049671	-	1617	-	ENSAMXP00000036868	538 (aa)	-	-
ENSAMXT00000016359	-	3140	XM_007241070	ENSAMXP00000016359	579 (aa)	XP_007241132	W5L947

Gene Model

Click here to download ENSAMXG00000015890's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00600	Sphingolipid metabolism	KEGG
amex01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015890	smpd5	99	43.178	ENSAMXG00000009000	smpd3	99	43.178

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015890	smpd5	100	65.741	ENSAPOG00000005846	smpd5	99	65.741	Acanthochromis_polyacanthus
ENSAMXG00000015890	smpd5	99	37.803	ENSAMEG00000006154	-	99	45.000	Ailuropoda_melanoleuca
ENSAMXG00000015890	smpd5	100	62.692	ENSACIG00000015732	smpd5	99	62.692	Amphilophus_citrinellus
ENSAMXG00000015890	smpd5	100	66.481	ENSAOCG00000001729	smpd5	99	66.481	Amphiprion_ocellaris
ENSAMXG00000015890	smpd5	100	65.926	ENSAPEG00000010110	smpd5	99	65.926	Amphiprion_percula
ENSAMXG00000015890	smpd5	100	63.918	ENSATEG00000005476	smpd5	99	63.918	Anabas_testudineus
ENSAMXG00000015890	smpd5	99	36.136	ENSACAG00000005338	-	99	45.538	Anolis_carolinensis
ENSAMXG00000015890	smpd5	100	64.498	ENSACLG00000004150	smpd5	99	64.498	Astatotilapia_calliptera
ENSAMXG00000015890	smpd5	99	38.235	ENSBTAG00000015040	-	93	42.604	Bos_taurus
ENSAMXG00000015890	smpd5	99	37.058	ENSCAFG00020018801	-	97	46.512	Canis_lupus_dingo
ENSAMXG00000015890	smpd5	99	45.234	ENSCPBG00000007123	-	94	53.165	Chrysemys_picta_bellii
ENSAMXG00000015890	smpd5	99	40.782	ENSCGRG00001020226	Smpd5	94	49.000	Cricetulus_griseus_chok1gshd
ENSAMXG00000015890	smpd5	99	40.782	ENSCGRG00000016807	Smpd5	94	49.000	Cricetulus_griseus_crigri
ENSAMXG00000015890	smpd5	91	62.311	ENSCSEG00000004339	smpd5	92	62.311	Cynoglossus_semilaevis
ENSAMXG00000015890	smpd5	100	69.245	ENSDARG00000059811	smpd5	99	69.245	Danio_rerio
ENSAMXG00000015890	smpd5	99	41.264	ENSEASG00005009745	-	97	49.662	Equus_asinus_asinus
ENSAMXG00000015890	smpd5	99	41.264	ENSECAG00000011998	-	97	49.662	Equus_caballus
ENSAMXG00000015890	smpd5	100	64.333	ENSELUG00000002998	smpd5	99	65.000	Esox_lucius
ENSAMXG00000015890	smpd5	90	56.869	ENSFCAG00000023364	SMPD3	99	43.223	Felis_catus
ENSAMXG00000015890	smpd5	81	64.097	ENSGMOG00000006983	smpd5	100	64.523	Gadus_morhua
ENSAMXG00000015890	smpd5	100	59.227	ENSGAFG00000005978	smpd5	99	59.227	Gambusia_affinis
ENSAMXG00000015890	smpd5	99	44.567	ENSGAGG00000010557	-	97	52.160	Gopherus_agassizii
ENSAMXG00000015890	smpd5	100	64.498	ENSHBUG00000017212	smpd5	99	64.498	Haplochromis_burtoni
ENSAMXG00000015890	smpd5	100	61.446	ENSHCOG00000005211	smpd5	99	61.274	Hippocampus_comes
ENSAMXG00000015890	smpd5	100	69.558	ENSIPUG00000007675	Smpd3	99	69.558	Ictalurus_punctatus
ENSAMXG00000015890	smpd5	99	38.848	ENSSTOG00000026841	-	96	46.624	Ictidomys_tridecemlineatus
ENSAMXG00000015890	smpd5	100	57.514	ENSKMAG00000014523	smpd5	99	67.164	Kryptolebias_marmoratus
ENSAMXG00000015890	smpd5	100	63.918	ENSLBEG00000000634	smpd5	98	63.918	Labrus_bergylta
ENSAMXG00000015890	smpd5	100	65.120	ENSMAMG00000012885	smpd5	99	65.120	Mastacembelus_armatus
ENSAMXG00000015890	smpd5	100	61.670	ENSMZEG00005014373	smpd5	99	61.687	Maylandia_zebra
ENSAMXG00000015890	smpd5	99	37.662	ENSMICG00000044882	-	97	45.515	Microcebus_murinus
ENSAMXG00000015890	smpd5	99	39.665	ENSMOCG00000004813	Smpd5	94	46.179	Microtus_ochrogaster
ENSAMXG00000015890	smpd5	88	53.571	ENSMODG00000005091	SMPD3	99	39.577	Monodelphis_domestica
ENSAMXG00000015890	smpd5	99	40.672	ENSMODG00000024098	-	96	47.273	Monodelphis_domestica
ENSAMXG00000015890	smpd5	99	38.590	ENSMPUG00000007287	-	97	48.311	Mustela_putorius_furo
ENSAMXG00000015890	smpd5	100	61.499	ENSNBRG00000015871	smpd5	99	61.499	Neolamprologus_brichardi
ENSAMXG00000015890	smpd5	56	54.045	ENSMEUG00000015228	-	73	54.545	Notamacropus_eugenii
ENSAMXG00000015890	smpd5	100	61.670	ENSONIG00000003005	smpd5	99	61.670	Oreochromis_niloticus
ENSAMXG00000015890	smpd5	99	37.729	ENSOANG00000015137	-	89	45.955	Ornithorhynchus_anatinus
ENSAMXG00000015890	smpd5	100	61.473	ENSORLG00000007890	smpd5	99	61.473	Oryzias_latipes
ENSAMXG00000015890	smpd5	100	61.815	ENSORLG00020014621	smpd5	99	61.815	Oryzias_latipes_hni
ENSAMXG00000015890	smpd5	100	61.972	ENSORLG00015020862	smpd5	99	61.972	Oryzias_latipes_hsok
ENSAMXG00000015890	smpd5	100	61.986	ENSOMEG00000021400	smpd5	99	61.986	Oryzias_melastigma
ENSAMXG00000015890	smpd5	99	38.628	ENSOARG00000015429	-	84	45.541	Ovis_aries
ENSAMXG00000015890	smpd5	90	56.550	ENSPPRG00000012973	SMPD3	99	42.986	Panthera_pardus
ENSAMXG00000015890	smpd5	99	39.626	ENSPPRG00000024542	-	97	47.973	Panthera_pardus
ENSAMXG00000015890	smpd5	99	46.127	ENSPTIG00000006728	SMPD3	99	46.127	Panthera_tigris_altaica
ENSAMXG00000015890	smpd5	100	61.307	ENSPKIG00000019783	smpd5	99	61.307	Paramormyrops_kingsleyae
ENSAMXG00000015890	smpd5	93	52.412	ENSPKIG00000015630	smpd3	99	42.457	Paramormyrops_kingsleyae
ENSAMXG00000015890	smpd5	99	58.922	ENSPMGG00000011984	smpd5	98	58.922	Periophthalmus_magnuspinnatus
ENSAMXG00000015890	smpd5	99	39.665	ENSPEMG00000015740	Smpd5	88	46.959	Peromyscus_maniculatus_bairdii
ENSAMXG00000015890	smpd5	99	40.472	ENSPCIG00000009107	-	92	49.686	Phascolarctos_cinereus
ENSAMXG00000015890	smpd5	100	59.541	ENSPFOG00000002379	smpd5	99	59.541	Poecilia_formosa
ENSAMXG00000015890	smpd5	100	59.574	ENSPLAG00000015772	smpd5	99	59.858	Poecilia_latipinna
ENSAMXG00000015890	smpd5	100	59.858	ENSPMEG00000001599	smpd5	99	59.858	Poecilia_mexicana
ENSAMXG00000015890	smpd5	100	58.864	ENSPREG00000000831	smpd5	99	58.864	Poecilia_reticulata
ENSAMXG00000015890	smpd5	100	64.684	ENSPNYG00000015647	smpd5	99	64.684	Pundamilia_nyererei
ENSAMXG00000015890	smpd5	99	51.713	ENSPNAG00000001774	smpd3	92	47.453	Pygocentrus_nattereri
ENSAMXG00000015890	smpd5	100	87.392	ENSPNAG00000018539	smpd5	100	87.392	Pygocentrus_nattereri
ENSAMXG00000015890	smpd5	88	53.722	ENSSHAG00000006412	SMPD3	99	40.668	Sarcophilus_harrisii
ENSAMXG00000015890	smpd5	99	40.035	ENSSHAG00000004065	-	96	46.784	Sarcophilus_harrisii
ENSAMXG00000015890	smpd5	100	64.212	ENSSFOG00015000870	smpd5	99	64.212	Scleropages_formosus
ENSAMXG00000015890	smpd5	100	65.292	ENSSMAG00000020132	smpd5	99	65.464	Scophthalmus_maximus
ENSAMXG00000015890	smpd5	100	60.818	ENSSDUG00000005881	smpd5	99	60.818	Seriola_dumerili
ENSAMXG00000015890	smpd5	100	60.818	ENSSLDG00000015320	smpd5	99	60.818	Seriola_lalandi_dorsalis
ENSAMXG00000015890	smpd5	100	66.729	ENSSPAG00000007973	smpd5	99	66.729	Stegastes_partitus
ENSAMXG00000015890	smpd5	55	45.791	ENSSSCG00000005922	-	96	47.138	Sus_scrofa
ENSAMXG00000015890	smpd5	100	60.757	ENSTRUG00000014862	smpd5	99	60.757	Takifugu_rubripes
ENSAMXG00000015890	smpd5	100	60.568	ENSTNIG00000018420	smpd5	99	60.568	Tetraodon_nigroviridis
ENSAMXG00000015890	smpd5	99	55.799	ENSXETG00000006675	smpd3	89	55.799	Xenopus_tropicalis
ENSAMXG00000015890	smpd5	100	44.981	ENSXETG00000031246	-	96	50.595	Xenopus_tropicalis
ENSAMXG00000015890	smpd5	100	59.857	ENSXCOG00000019783	smpd5	99	59.857	Xiphophorus_couchianus
ENSAMXG00000015890	smpd5	100	60.145	ENSXMAG00000013998	smpd5	99	60.145	Xiphophorus_maculatus