EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000015953 (Gene tree)
Gene ID: 103040756
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11422 bases
Position: chrAPWO02000027.1:7002815-7014236
Accession: 103040756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016461	Ribosomal_L7Ae	PF01248.26	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016461	-	2494	XM_007230017	ENSAMXP00000016461	783 (aa)	XP_007230079	W5L9E9

Gene Model

Click here to download ENSAMXG00000015953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000015953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000015953	secisbp2	60	42.015	ENSAMXG00000037811	SECISBP2L	50	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000015953	secisbp2	62	48.185	ENSG00000187742	SECISBP2	57	49.190	Homo_sapiens
ENSAMXG00000015953	secisbp2	51	45.585	ENSG00000138593	SECISBP2L	57	47.453	Homo_sapiens
ENSAMXG00000015953	secisbp2	98	48.162	ENSAPOG00000005939	secisbp2	87	51.362	Acanthochromis_polyacanthus
ENSAMXG00000015953	secisbp2	62	48.381	ENSAMEG00000003349	SECISBP2	53	47.071	Ailuropoda_melanoleuca
ENSAMXG00000015953	secisbp2	50	58.376	ENSACIG00000024185	secisbp2	76	64.286	Amphilophus_citrinellus
ENSAMXG00000015953	secisbp2	96	49.100	ENSAOCG00000019052	secisbp2	85	52.066	Amphiprion_ocellaris
ENSAMXG00000015953	secisbp2	96	50.000	ENSAPEG00000012971	secisbp2	85	51.762	Amphiprion_percula
ENSAMXG00000015953	secisbp2	51	47.857	ENSATEG00000018252	SECISBP2L	51	39.078	Anabas_testudineus
ENSAMXG00000015953	secisbp2	95	48.956	ENSATEG00000001095	secisbp2	84	51.185	Anabas_testudineus
ENSAMXG00000015953	secisbp2	69	47.059	ENSAPLG00000013053	SECISBP2	61	46.774	Anas_platyrhynchos
ENSAMXG00000015953	secisbp2	82	42.297	ENSACAG00000016594	SECISBP2	73	43.328	Anolis_carolinensis
ENSAMXG00000015953	secisbp2	73	38.154	ENSACLG00000017020	SECISBP2L	52	39.298	Astatotilapia_calliptera
ENSAMXG00000015953	secisbp2	98	48.656	ENSACLG00000019976	secisbp2	87	50.621	Astatotilapia_calliptera
ENSAMXG00000015953	secisbp2	62	49.595	ENSBTAG00000001939	SECISBP2	52	50.790	Bos_taurus
ENSAMXG00000015953	secisbp2	62	48.387	ENSCJAG00000007806	SECISBP2	53	49.091	Callithrix_jacchus
ENSAMXG00000015953	secisbp2	62	49.095	ENSCAFG00000002188	SECISBP2	53	48.290	Canis_familiaris
ENSAMXG00000015953	secisbp2	62	49.095	ENSCAFG00020007224	SECISBP2	53	48.290	Canis_lupus_dingo
ENSAMXG00000015953	secisbp2	60	47.510	ENSTSYG00000014119	SECISBP2	55	47.454	Carlito_syrichta
ENSAMXG00000015953	secisbp2	64	47.817	ENSCPOG00000014270	SECISBP2	54	47.628	Cavia_porcellus
ENSAMXG00000015953	secisbp2	62	48.790	ENSCCAG00000013350	SECISBP2	53	48.303	Cebus_capucinus
ENSAMXG00000015953	secisbp2	62	47.368	ENSCATG00000008304	SECISBP2	51	52.607	Cercocebus_atys
ENSAMXG00000015953	secisbp2	62	49.698	ENSCLAG00000001166	SECISBP2	51	48.992	Chinchilla_lanigera
ENSAMXG00000015953	secisbp2	62	48.185	ENSCSAG00000007310	SECISBP2	53	48.303	Chlorocebus_sabaeus
ENSAMXG00000015953	secisbp2	62	49.712	ENSCPBG00000005608	SECISBP2	99	49.338	Chrysemys_picta_bellii
ENSAMXG00000015953	secisbp2	62	48.400	ENSCANG00000034551	SECISBP2	57	48.889	Colobus_angolensis_palliatus
ENSAMXG00000015953	secisbp2	62	48.374	ENSCGRG00001013930	Secisbp2	53	47.984	Cricetulus_griseus_chok1gshd
ENSAMXG00000015953	secisbp2	62	48.374	ENSCGRG00000002600	Secisbp2	53	47.984	Cricetulus_griseus_crigri
ENSAMXG00000015953	secisbp2	73	38.117	ENSCVAG00000010490	SECISBP2L	51	39.832	Cyprinodon_variegatus
ENSAMXG00000015953	secisbp2	90	48.801	ENSCVAG00000015876	secisbp2	85	49.169	Cyprinodon_variegatus
ENSAMXG00000015953	secisbp2	75	63.435	ENSDARG00000073892	secisbp2	99	62.437	Danio_rerio
ENSAMXG00000015953	secisbp2	61	51.033	ENSDNOG00000009432	SECISBP2	51	50.928	Dasypus_novemcinctus
ENSAMXG00000015953	secisbp2	62	50.507	ENSEASG00005013960	SECISBP2	53	50.507	Equus_asinus_asinus
ENSAMXG00000015953	secisbp2	62	50.304	ENSECAG00000015868	SECISBP2	53	50.304	Equus_caballus
ENSAMXG00000015953	secisbp2	55	58.756	ENSELUG00000014795	-	91	58.199	Esox_lucius
ENSAMXG00000015953	secisbp2	62	47.862	ENSFCAG00000004214	SECISBP2	50	50.698	Felis_catus
ENSAMXG00000015953	secisbp2	70	47.789	ENSFALG00000012441	SECISBP2	64	48.041	Ficedula_albicollis
ENSAMXG00000015953	secisbp2	63	49.497	ENSFDAG00000021183	SECISBP2	52	49.701	Fukomys_damarensis
ENSAMXG00000015953	secisbp2	88	49.650	ENSFHEG00000004095	secisbp2	84	49.025	Fundulus_heteroclitus
ENSAMXG00000015953	secisbp2	73	37.904	ENSFHEG00000002604	SECISBP2L	51	39.597	Fundulus_heteroclitus
ENSAMXG00000015953	secisbp2	72	45.199	ENSGALG00000010694	SECISBP2	62	44.572	Gallus_gallus
ENSAMXG00000015953	secisbp2	97	47.051	ENSGAFG00000016947	secisbp2	85	48.725	Gambusia_affinis
ENSAMXG00000015953	secisbp2	73	38.450	ENSGAFG00000005460	SECISBP2L	50	39.601	Gambusia_affinis
ENSAMXG00000015953	secisbp2	84	51.802	ENSGACG00000013757	secisbp2	100	51.874	Gasterosteus_aculeatus
ENSAMXG00000015953	secisbp2	62	48.089	ENSGGOG00000000453	SECISBP2	57	49.301	Gorilla_gorilla
ENSAMXG00000015953	secisbp2	53	64.387	ENSHBUG00000007014	secisbp2	99	64.066	Haplochromis_burtoni
ENSAMXG00000015953	secisbp2	63	48.089	ENSHGLG00000014380	SECISBP2	51	48.089	Heterocephalus_glaber_female
ENSAMXG00000015953	secisbp2	63	48.089	ENSHGLG00100006953	SECISBP2	51	48.089	Heterocephalus_glaber_male
ENSAMXG00000015953	secisbp2	81	48.837	ENSHCOG00000008010	secisbp2	74	51.505	Hippocampus_comes
ENSAMXG00000015953	secisbp2	99	62.897	ENSIPUG00000015393	secisbp2	97	63.091	Ictalurus_punctatus
ENSAMXG00000015953	secisbp2	61	50.103	ENSSTOG00000000921	SECISBP2	51	49.689	Ictidomys_tridecemlineatus
ENSAMXG00000015953	secisbp2	96	49.219	ENSKMAG00000007129	secisbp2	89	48.262	Kryptolebias_marmoratus
ENSAMXG00000015953	secisbp2	97	51.266	ENSLBEG00000026023	secisbp2	85	53.562	Labrus_bergylta
ENSAMXG00000015953	secisbp2	74	40.219	ENSLACG00000012542	SECISBP2L	54	41.794	Latimeria_chalumnae
ENSAMXG00000015953	secisbp2	62	51.468	ENSLACG00000005735	SECISBP2	90	51.468	Latimeria_chalumnae
ENSAMXG00000015953	secisbp2	73	57.290	ENSLOCG00000011742	secisbp2	97	56.208	Lepisosteus_oculatus
ENSAMXG00000015953	secisbp2	71	39.095	ENSLOCG00000013180	SECISBP2L	50	40.603	Lepisosteus_oculatus
ENSAMXG00000015953	secisbp2	62	47.984	ENSMFAG00000003045	SECISBP2	57	47.904	Macaca_fascicularis
ENSAMXG00000015953	secisbp2	62	48.185	ENSMMUG00000012532	SECISBP2	57	48.104	Macaca_mulatta
ENSAMXG00000015953	secisbp2	62	47.782	ENSMNEG00000031737	SECISBP2	57	47.705	Macaca_nemestrina
ENSAMXG00000015953	secisbp2	62	48.185	ENSMLEG00000028868	SECISBP2	57	48.104	Mandrillus_leucophaeus
ENSAMXG00000015953	secisbp2	97	48.550	ENSMAMG00000006644	secisbp2	86	51.247	Mastacembelus_armatus
ENSAMXG00000015953	secisbp2	98	48.656	ENSMZEG00005013614	secisbp2	87	50.621	Maylandia_zebra
ENSAMXG00000015953	secisbp2	62	48.000	ENSMAUG00000008659	Secisbp2	54	48.178	Mesocricetus_auratus
ENSAMXG00000015953	secisbp2	60	49.793	ENSMICG00000001176	SECISBP2	55	48.963	Microcebus_murinus
ENSAMXG00000015953	secisbp2	84	40.368	ENSMOCG00000000616	Secisbp2	53	48.096	Microtus_ochrogaster
ENSAMXG00000015953	secisbp2	50	65.075	ENSMMOG00000017977	secisbp2	82	67.935	Mola_mola
ENSAMXG00000015953	secisbp2	51	47.518	ENSMODG00000002516	SECISBP2L	51	40.234	Monodelphis_domestica
ENSAMXG00000015953	secisbp2	61	49.419	ENSMODG00000013365	SECISBP2	55	50.288	Monodelphis_domestica
ENSAMXG00000015953	secisbp2	90	50.280	ENSMALG00000004907	secisbp2	88	49.306	Monopterus_albus
ENSAMXG00000015953	secisbp2	51	47.059	MGP_CAROLIEiJ_G0024231	Secisbp2l	76	50.592	Mus_caroli
ENSAMXG00000015953	secisbp2	63	48.310	MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.921	Mus_caroli
ENSAMXG00000015953	secisbp2	62	48.800	ENSMUSG00000035139	Secisbp2	53	48.805	Mus_musculus
ENSAMXG00000015953	secisbp2	51	47.059	ENSMUSG00000035093	Secisbp2l	75	50.592	Mus_musculus
ENSAMXG00000015953	secisbp2	51	47.059	MGP_PahariEiJ_G0025677	Secisbp2l	76	50.592	Mus_pahari
ENSAMXG00000015953	secisbp2	62	48.795	MGP_PahariEiJ_G0019584	Secisbp2	53	48.400	Mus_pahari
ENSAMXG00000015953	secisbp2	51	47.059	MGP_SPRETEiJ_G0025151	Secisbp2l	76	50.592	Mus_spretus
ENSAMXG00000015953	secisbp2	62	48.713	MGP_SPRETEiJ_G0019399	Secisbp2	53	48.521	Mus_spretus
ENSAMXG00000015953	secisbp2	61	49.174	ENSMPUG00000008495	-	70	50.230	Mustela_putorius_furo
ENSAMXG00000015953	secisbp2	68	47.103	ENSMLUG00000012348	SECISBP2	51	49.693	Myotis_lucifugus
ENSAMXG00000015953	secisbp2	62	46.856	ENSNGAG00000002364	Secisbp2	53	47.262	Nannospalax_galili
ENSAMXG00000015953	secisbp2	98	48.469	ENSNBRG00000022804	secisbp2	87	50.274	Neolamprologus_brichardi
ENSAMXG00000015953	secisbp2	62	48.387	ENSNLEG00000008739	SECISBP2	57	48.687	Nomascus_leucogenys
ENSAMXG00000015953	secisbp2	62	49.087	ENSODEG00000000675	SECISBP2	53	48.387	Octodon_degus
ENSAMXG00000015953	secisbp2	63	60.772	ENSONIG00000016931	secisbp2	99	65.586	Oreochromis_niloticus
ENSAMXG00000015953	secisbp2	73	38.235	ENSONIG00000013343	SECISBP2L	54	39.369	Oreochromis_niloticus
ENSAMXG00000015953	secisbp2	68	47.124	ENSOCUG00000012932	SECISBP2	59	45.781	Oryctolagus_cuniculus
ENSAMXG00000015953	secisbp2	87	50.287	ENSORLG00000000343	secisbp2	96	49.213	Oryzias_latipes
ENSAMXG00000015953	secisbp2	87	49.714	ENSORLG00020012878	secisbp2	90	50.746	Oryzias_latipes_hni
ENSAMXG00000015953	secisbp2	87	50.495	ENSORLG00015004559	secisbp2	82	51.274	Oryzias_latipes_hsok
ENSAMXG00000015953	secisbp2	84	51.724	ENSOMEG00000008595	secisbp2	82	50.445	Oryzias_melastigma
ENSAMXG00000015953	secisbp2	62	47.695	ENSOGAG00000000317	SECISBP2	51	48.566	Otolemur_garnettii
ENSAMXG00000015953	secisbp2	62	49.000	ENSPPAG00000012385	SECISBP2	57	49.495	Pan_paniscus
ENSAMXG00000015953	secisbp2	62	47.755	ENSPPRG00000023911	SECISBP2	53	47.551	Panthera_pardus
ENSAMXG00000015953	secisbp2	62	48.491	ENSPTRG00000021094	SECISBP2	58	47.921	Pan_troglodytes
ENSAMXG00000015953	secisbp2	62	48.185	ENSPANG00000024873	SECISBP2	51	52.607	Papio_anubis
ENSAMXG00000015953	secisbp2	86	50.817	ENSPKIG00000006499	SECISBP2	81	50.683	Paramormyrops_kingsleyae
ENSAMXG00000015953	secisbp2	88	42.952	ENSPSIG00000016257	SECISBP2	89	42.154	Pelodiscus_sinensis
ENSAMXG00000015953	secisbp2	62	47.251	ENSPEMG00000020212	Secisbp2	53	47.368	Peromyscus_maniculatus_bairdii
ENSAMXG00000015953	secisbp2	75	37.333	ENSPCIG00000018047	SECISBP2L	51	39.535	Phascolarctos_cinereus
ENSAMXG00000015953	secisbp2	61	49.310	ENSPCIG00000010304	SECISBP2	55	48.728	Phascolarctos_cinereus
ENSAMXG00000015953	secisbp2	98	46.523	ENSPFOG00000008146	secisbp2	98	47.376	Poecilia_formosa
ENSAMXG00000015953	secisbp2	73	38.295	ENSPFOG00000004217	SECISBP2L	52	41.075	Poecilia_formosa
ENSAMXG00000015953	secisbp2	73	38.295	ENSPLAG00000017301	SECISBP2L	51	39.504	Poecilia_latipinna
ENSAMXG00000015953	secisbp2	53	61.882	ENSPLAG00000004505	secisbp2	96	61.882	Poecilia_latipinna
ENSAMXG00000015953	secisbp2	98	46.379	ENSPMEG00000013702	secisbp2	86	48.954	Poecilia_mexicana
ENSAMXG00000015953	secisbp2	73	38.295	ENSPMEG00000000627	SECISBP2L	51	39.504	Poecilia_mexicana
ENSAMXG00000015953	secisbp2	73	38.213	ENSPREG00000008660	SECISBP2L	53	38.907	Poecilia_reticulata
ENSAMXG00000015953	secisbp2	89	49.153	ENSPREG00000008117	secisbp2	87	48.805	Poecilia_reticulata
ENSAMXG00000015953	secisbp2	63	48.317	ENSPPYG00000019359	SECISBP2	53	49.509	Pongo_abelii
ENSAMXG00000015953	secisbp2	60	50.622	ENSPCOG00000013354	SECISBP2	51	50.622	Propithecus_coquereli
ENSAMXG00000015953	secisbp2	98	48.656	ENSPNYG00000016799	secisbp2	87	50.621	Pundamilia_nyererei
ENSAMXG00000015953	secisbp2	99	64.331	ENSPNAG00000029922	secisbp2	98	65.390	Pygocentrus_nattereri
ENSAMXG00000015953	secisbp2	62	48.491	ENSRNOG00000013773	Secisbp2	53	48.297	Rattus_norvegicus
ENSAMXG00000015953	secisbp2	62	47.677	ENSRBIG00000044115	SECISBP2	52	47.535	Rhinopithecus_bieti
ENSAMXG00000015953	secisbp2	62	48.185	ENSRROG00000030742	SECISBP2	53	52.844	Rhinopithecus_roxellana
ENSAMXG00000015953	secisbp2	62	48.387	ENSSBOG00000015392	SECISBP2	61	49.095	Saimiri_boliviensis_boliviensis
ENSAMXG00000015953	secisbp2	62	48.907	ENSSHAG00000005947	SECISBP2	53	50.800	Sarcophilus_harrisii
ENSAMXG00000015953	secisbp2	74	38.333	ENSSHAG00000016105	SECISBP2L	51	40.199	Sarcophilus_harrisii
ENSAMXG00000015953	secisbp2	86	51.297	ENSSFOG00015010409	secisbp2	80	50.000	Scleropages_formosus
ENSAMXG00000015953	secisbp2	96	50.379	ENSSMAG00000008472	secisbp2	98	54.692	Scophthalmus_maximus
ENSAMXG00000015953	secisbp2	51	47.005	ENSSDUG00000016367	SECISBP2L	51	40.436	Seriola_dumerili
ENSAMXG00000015953	secisbp2	97	50.064	ENSSDUG00000002089	secisbp2	85	52.762	Seriola_dumerili
ENSAMXG00000015953	secisbp2	97	49.936	ENSSLDG00000003510	secisbp2	85	52.843	Seriola_lalandi_dorsalis
ENSAMXG00000015953	secisbp2	51	46.667	ENSSLDG00000009089	SECISBP2L	51	40.369	Seriola_lalandi_dorsalis
ENSAMXG00000015953	secisbp2	64	49.444	ENSSPUG00000009635	SECISBP2	65	48.507	Sphenodon_punctatus
ENSAMXG00000015953	secisbp2	92	52.941	ENSSPAG00000013606	secisbp2	90	52.778	Stegastes_partitus
ENSAMXG00000015953	secisbp2	70	45.913	ENSTGUG00000000440	SECISBP2	98	45.690	Taeniopygia_guttata
ENSAMXG00000015953	secisbp2	91	48.427	ENSTRUG00000016835	secisbp2	94	48.427	Takifugu_rubripes
ENSAMXG00000015953	secisbp2	73	37.227	ENSTRUG00000016925	SECISBP2L	51	38.842	Takifugu_rubripes
ENSAMXG00000015953	secisbp2	62	60.119	ENSTNIG00000015576	secisbp2	96	59.289	Tetraodon_nigroviridis
ENSAMXG00000015953	secisbp2	62	49.597	ENSTTRG00000003339	SECISBP2	52	48.893	Tursiops_truncatus
ENSAMXG00000015953	secisbp2	63	49.299	ENSUAMG00000016243	SECISBP2	53	53.521	Ursus_americanus
ENSAMXG00000015953	secisbp2	63	48.898	ENSUMAG00000016261	SECISBP2	53	51.544	Ursus_maritimus
ENSAMXG00000015953	secisbp2	62	49.095	ENSVVUG00000022278	SECISBP2	56	48.290	Vulpes_vulpes
ENSAMXG00000015953	secisbp2	62	51.292	ENSXETG00000029955	SECISBP2	84	50.895	Xenopus_tropicalis
ENSAMXG00000015953	secisbp2	50	60.101	ENSXCOG00000009547	secisbp2	64	64.507	Xiphophorus_couchianus
ENSAMXG00000015953	secisbp2	73	38.154	ENSXMAG00000002266	SECISBP2L	51	39.539	Xiphophorus_maculatus
ENSAMXG00000015953	secisbp2	97	46.470	ENSXMAG00000003090	secisbp2	85	48.464	Xiphophorus_maculatus