EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000016000 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 468 bases
Position: chrAPWO02000027.1:2033313-2033780
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016477	PARP	PF00644.20	3.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016477	-	468	-	ENSAMXP00000016477	155 (aa)	-	W5L9G5

Gene Model

Click here to download ENSAMXG00000016000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000016000	-	83	56.489	ENSAMXG00000025187	gig2p	60	56.489
ENSAMXG00000016000	-	77	58.824	ENSAMXG00000043196	-	84	58.824
ENSAMXG00000016000	-	74	61.404	ENSAMXG00000041087	-	75	61.404
ENSAMXG00000016000	-	73	59.292	ENSAMXG00000026038	-	78	59.292
ENSAMXG00000016000	-	80	70.161	ENSAMXG00000030672	-	86	70.161
ENSAMXG00000016000	-	80	48.387	ENSAMXG00000026111	-	56	48.387
ENSAMXG00000016000	-	74	61.404	ENSAMXG00000026110	gig2d	75	61.404
ENSAMXG00000016000	-	83	57.031	ENSAMXG00000032512	gig2d	82	57.031
ENSAMXG00000016000	-	86	63.793	ENSAMXG00000004144	-	82	63.793
ENSAMXG00000016000	-	79	51.200	ENSAMXG00000025547	gig2o	60	51.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016000	-	83	55.385	ENSAPOG00000002358	gig2p	72	55.385	Acanthochromis_polyacanthus
ENSAMXG00000016000	-	77	57.983	ENSAPOG00000010190	gig2h	77	57.983	Acanthochromis_polyacanthus
ENSAMXG00000016000	-	75	58.974	ENSACIG00000023385	-	73	58.974	Amphilophus_citrinellus
ENSAMXG00000016000	-	77	62.500	ENSACIG00000009062	-	84	62.500	Amphilophus_citrinellus
ENSAMXG00000016000	-	76	60.000	ENSACIG00000006934	gig2p	57	60.000	Amphilophus_citrinellus
ENSAMXG00000016000	-	72	58.772	ENSACIG00000006917	-	71	58.772	Amphilophus_citrinellus
ENSAMXG00000016000	-	77	60.833	ENSACIG00000018452	-	77	60.833	Amphilophus_citrinellus
ENSAMXG00000016000	-	93	54.331	ENSAOCG00000010944	-	74	54.331	Amphiprion_ocellaris
ENSAMXG00000016000	-	83	54.615	ENSAOCG00000003416	gig2p	57	54.615	Amphiprion_ocellaris
ENSAMXG00000016000	-	83	54.615	ENSAPEG00000017256	gig2p	57	54.615	Amphiprion_percula
ENSAMXG00000016000	-	84	50.000	ENSATEG00000003204	gig2p	79	50.000	Anabas_testudineus
ENSAMXG00000016000	-	76	57.500	ENSATEG00000003163	gig2p	77	57.500	Anabas_testudineus
ENSAMXG00000016000	-	74	57.759	ENSATEG00000003250	gig2p	54	57.759	Anabas_testudineus
ENSAMXG00000016000	-	94	51.020	ENSATEG00000003229	gig2p	69	51.020	Anabas_testudineus
ENSAMXG00000016000	-	75	59.483	ENSACLG00000019044	gig2g	80	59.483	Astatotilapia_calliptera
ENSAMXG00000016000	-	75	54.622	ENSACLG00000006461	-	53	54.622	Astatotilapia_calliptera
ENSAMXG00000016000	-	85	55.303	ENSCVAG00000003718	-	87	55.303	Cyprinodon_variegatus
ENSAMXG00000016000	-	76	55.833	ENSCVAG00000006837	gig2p	57	55.833	Cyprinodon_variegatus
ENSAMXG00000016000	-	74	57.759	ENSCVAG00000006821	gig2p	68	57.759	Cyprinodon_variegatus
ENSAMXG00000016000	-	78	58.065	ENSCVAG00000003734	-	90	58.065	Cyprinodon_variegatus
ENSAMXG00000016000	-	87	57.778	ENSDARG00000099735	gig2f	85	57.778	Danio_rerio
ENSAMXG00000016000	-	77	57.143	ENSDARG00000098463	gig2g	76	57.143	Danio_rerio
ENSAMXG00000016000	-	77	57.983	ENSDARG00000069769	gig2j	76	57.983	Danio_rerio
ENSAMXG00000016000	-	74	62.281	ENSDARG00000091730	gig2l	100	62.281	Danio_rerio
ENSAMXG00000016000	-	79	52.000	ENSDARG00000086903	gig2o	57	52.000	Danio_rerio
ENSAMXG00000016000	-	75	62.393	ENSDARG00000099325	gig2i	73	62.393	Danio_rerio
ENSAMXG00000016000	-	77	56.303	ENSDARG00000098772	gig2d	77	56.303	Danio_rerio
ENSAMXG00000016000	-	83	63.478	ENSDARG00000075757	gig2e	85	63.478	Danio_rerio
ENSAMXG00000016000	-	83	54.962	ENSDARG00000088260	gig2p	59	54.962	Danio_rerio
ENSAMXG00000016000	-	77	57.143	ENSDARG00000103444	gig2h	76	57.143	Danio_rerio
ENSAMXG00000016000	-	76	53.333	ENSELUG00000017166	gig2o	56	53.333	Esox_lucius
ENSAMXG00000016000	-	83	53.846	ENSFHEG00000017724	gig2p	58	53.846	Fundulus_heteroclitus
ENSAMXG00000016000	-	81	53.543	ENSFHEG00000017712	-	52	53.543	Fundulus_heteroclitus
ENSAMXG00000016000	-	74	59.829	ENSGAFG00000009440	gig2p	76	59.829	Gambusia_affinis
ENSAMXG00000016000	-	77	57.025	ENSGAFG00000009453	gig2p	77	57.025	Gambusia_affinis
ENSAMXG00000016000	-	57	55.682	ENSGACG00000010431	gig2p	100	55.682	Gasterosteus_aculeatus
ENSAMXG00000016000	-	77	55.372	ENSHBUG00000010473	-	69	55.372	Haplochromis_burtoni
ENSAMXG00000016000	-	75	60.684	ENSHBUG00000019410	-	82	60.684	Haplochromis_burtoni
ENSAMXG00000016000	-	84	59.231	ENSHBUG00000018939	-	87	59.231	Haplochromis_burtoni
ENSAMXG00000016000	-	74	59.483	ENSHBUG00000010491	gig2p	52	59.483	Haplochromis_burtoni
ENSAMXG00000016000	-	75	65.254	ENSIPUG00000007003	-	86	65.254	Ictalurus_punctatus
ENSAMXG00000016000	-	86	48.551	ENSIPUG00000001531	-	63	48.551	Ictalurus_punctatus
ENSAMXG00000016000	-	79	56.452	ENSIPUG00000022554	gig2p	56	56.452	Ictalurus_punctatus
ENSAMXG00000016000	-	75	60.684	ENSIPUG00000007035	-	69	60.684	Ictalurus_punctatus
ENSAMXG00000016000	-	75	66.379	ENSIPUG00000000101	-	77	66.379	Ictalurus_punctatus
ENSAMXG00000016000	-	85	68.182	ENSIPUG00000005433	-	80	68.702	Ictalurus_punctatus
ENSAMXG00000016000	-	77	64.348	ENSIPUG00000001510	-	81	64.348	Ictalurus_punctatus
ENSAMXG00000016000	-	76	52.500	ENSIPUG00000009280	gig2o	50	52.500	Ictalurus_punctatus
ENSAMXG00000016000	-	76	57.500	ENSKMAG00000007923	-	53	57.500	Kryptolebias_marmoratus
ENSAMXG00000016000	-	83	51.538	ENSKMAG00000007907	gig2p	58	51.538	Kryptolebias_marmoratus
ENSAMXG00000016000	-	88	50.714	ENSLBEG00000018765	-	63	50.714	Labrus_bergylta
ENSAMXG00000016000	-	76	59.167	ENSLBEG00000018778	gig2p	57	59.167	Labrus_bergylta
ENSAMXG00000016000	-	75	61.017	ENSLACG00000000239	-	79	57.812	Latimeria_chalumnae
ENSAMXG00000016000	-	86	61.538	ENSLACG00000015833	-	83	61.538	Latimeria_chalumnae
ENSAMXG00000016000	-	88	54.348	ENSLACG00000015882	gig2p	64	54.348	Latimeria_chalumnae
ENSAMXG00000016000	-	83	51.938	ENSLACG00000018888	-	58	51.938	Latimeria_chalumnae
ENSAMXG00000016000	-	86	44.030	ENSLOCG00000005879	-	65	47.761	Lepisosteus_oculatus
ENSAMXG00000016000	-	77	59.829	ENSLOCG00000005897	gig2e	51	59.829	Lepisosteus_oculatus
ENSAMXG00000016000	-	76	58.333	ENSMAMG00000011285	gig2p	54	58.333	Mastacembelus_armatus
ENSAMXG00000016000	-	82	51.163	ENSMZEG00005013815	-	55	51.163	Maylandia_zebra
ENSAMXG00000016000	-	84	53.383	ENSMMOG00000005594	gig2p	58	53.383	Mola_mola
ENSAMXG00000016000	-	81	53.543	ENSMMOG00000005597	-	57	53.543	Mola_mola
ENSAMXG00000016000	-	79	56.800	ENSMALG00000008417	gig2p	55	56.800	Monopterus_albus
ENSAMXG00000016000	-	81	51.969	ENSNBRG00000000872	-	72	51.969	Neolamprologus_brichardi
ENSAMXG00000016000	-	79	54.098	ENSNBRG00000009049	-	76	54.098	Neolamprologus_brichardi
ENSAMXG00000016000	-	77	60.504	ENSNBRG00000009062	-	73	60.504	Neolamprologus_brichardi
ENSAMXG00000016000	-	75	59.664	ENSNBRG00000000843	gig2p	60	59.664	Neolamprologus_brichardi
ENSAMXG00000016000	-	81	58.333	ENSONIG00000011824	gig2p	77	58.333	Oreochromis_niloticus
ENSAMXG00000016000	-	77	60.504	ENSONIG00000009460	gig2h	85	60.504	Oreochromis_niloticus
ENSAMXG00000016000	-	81	55.906	ENSORLG00000010287	gig2p	58	55.906	Oryzias_latipes
ENSAMXG00000016000	-	80	51.587	ENSORLG00000028073	-	60	51.587	Oryzias_latipes
ENSAMXG00000016000	-	81	55.906	ENSORLG00020008422	gig2p	80	55.906	Oryzias_latipes_hni
ENSAMXG00000016000	-	74	54.701	ENSORLG00020008444	-	63	54.701	Oryzias_latipes_hni
ENSAMXG00000016000	-	81	55.906	ENSORLG00015022600	gig2p	92	55.906	Oryzias_latipes_hsok
ENSAMXG00000016000	-	77	57.143	ENSORLG00015008571	gig2g	81	57.143	Oryzias_latipes_hsok
ENSAMXG00000016000	-	80	50.794	ENSORLG00015022642	-	60	50.794	Oryzias_latipes_hsok
ENSAMXG00000016000	-	74	58.261	ENSOMEG00000013250	-	67	58.261	Oryzias_melastigma
ENSAMXG00000016000	-	73	58.261	ENSOMEG00000007340	-	65	58.261	Oryzias_melastigma
ENSAMXG00000016000	-	77	57.983	ENSOMEG00000013589	-	70	57.983	Oryzias_melastigma
ENSAMXG00000016000	-	77	55.462	ENSOMEG00000015239	-	75	55.462	Oryzias_melastigma
ENSAMXG00000016000	-	77	55.462	ENSOMEG00000015253	-	80	55.462	Oryzias_melastigma
ENSAMXG00000016000	-	77	63.025	ENSPKIG00000014377	-	89	63.025	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	77	69.167	ENSPKIG00000000863	-	73	69.167	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	75	65.517	ENSPKIG00000001665	-	79	65.517	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	85	61.364	ENSPKIG00000000927	-	74	61.364	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	77	65.833	ENSPKIG00000003192	-	75	65.833	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	78	66.116	ENSPKIG00000000878	-	92	66.116	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	77	67.227	ENSPKIG00000014390	-	89	67.227	Paramormyrops_kingsleyae
ENSAMXG00000016000	-	80	54.032	ENSPMAG00000010332	-	79	54.032	Petromyzon_marinus
ENSAMXG00000016000	-	87	51.145	ENSPMAG00000005660	-	94	51.145	Petromyzon_marinus
ENSAMXG00000016000	-	90	59.091	ENSPFOG00000005274	gig2g	96	59.091	Poecilia_formosa
ENSAMXG00000016000	-	83	56.911	ENSPFOG00000006191	gig2p	81	56.911	Poecilia_formosa
ENSAMXG00000016000	-	83	54.478	ENSPMEG00000018167	gig2p	60	54.478	Poecilia_mexicana
ENSAMXG00000016000	-	80	55.556	ENSPMEG00000018196	-	56	55.556	Poecilia_mexicana
ENSAMXG00000016000	-	77	59.664	ENSPMEG00000007652	gig2h	74	59.664	Poecilia_mexicana
ENSAMXG00000016000	-	80	54.762	ENSPREG00000005273	-	58	54.762	Poecilia_reticulata
ENSAMXG00000016000	-	76	58.333	ENSPREG00000005283	gig2p	74	58.333	Poecilia_reticulata
ENSAMXG00000016000	-	74	59.483	ENSPNYG00000021226	gig2p	52	59.483	Pundamilia_nyererei
ENSAMXG00000016000	-	77	53.279	ENSPNYG00000021214	-	68	53.279	Pundamilia_nyererei
ENSAMXG00000016000	-	83	58.594	ENSPNYG00000009627	-	72	58.594	Pundamilia_nyererei
ENSAMXG00000016000	-	81	62.931	ENSPNYG00000009654	-	92	62.931	Pundamilia_nyererei
ENSAMXG00000016000	-	74	61.739	ENSPNAG00000026634	-	87	61.739	Pygocentrus_nattereri
ENSAMXG00000016000	-	85	50.758	ENSPNAG00000015816	-	61	50.000	Pygocentrus_nattereri
ENSAMXG00000016000	-	76	63.559	ENSPNAG00000015845	gig2d	77	63.559	Pygocentrus_nattereri
ENSAMXG00000016000	-	81	56.250	ENSPNAG00000014831	gig2p	59	56.250	Pygocentrus_nattereri
ENSAMXG00000016000	-	83	66.406	ENSPNAG00000021255	-	82	66.406	Pygocentrus_nattereri
ENSAMXG00000016000	-	93	46.667	ENSPNAG00000012118	gig2o	72	46.667	Pygocentrus_nattereri
ENSAMXG00000016000	-	78	61.983	ENSPNAG00000015811	gig2d	80	61.983	Pygocentrus_nattereri
ENSAMXG00000016000	-	77	61.667	ENSPNAG00000026625	-	86	61.667	Pygocentrus_nattereri
ENSAMXG00000016000	-	81	56.800	ENSSFOG00015005876	-	78	56.800	Scleropages_formosus
ENSAMXG00000016000	-	79	50.400	ENSSFOG00015007829	gig2o	58	50.400	Scleropages_formosus
ENSAMXG00000016000	-	80	61.667	ENSSFOG00015005900	-	89	61.667	Scleropages_formosus
ENSAMXG00000016000	-	81	55.039	ENSSFOG00015009887	gig2p	59	55.039	Scleropages_formosus
ENSAMXG00000016000	-	80	50.806	ENSSFOG00015005862	-	57	50.806	Scleropages_formosus
ENSAMXG00000016000	-	78	58.678	ENSSFOG00015005869	-	56	58.678	Scleropages_formosus
ENSAMXG00000016000	-	76	56.667	ENSSMAG00000008317	gig2p	54	56.667	Scophthalmus_maximus
ENSAMXG00000016000	-	81	51.181	ENSSMAG00000008329	-	56	51.181	Scophthalmus_maximus
ENSAMXG00000016000	-	81	53.906	ENSSDUG00000018069	gig2p	60	53.906	Seriola_dumerili
ENSAMXG00000016000	-	95	50.000	ENSSDUG00000018079	-	86	50.000	Seriola_dumerili
ENSAMXG00000016000	-	81	53.125	ENSSLDG00000018358	gig2p	57	53.125	Seriola_lalandi_dorsalis
ENSAMXG00000016000	-	81	53.543	ENSSPAG00000005252	gig2p	65	53.543	Stegastes_partitus
ENSAMXG00000016000	-	83	54.615	ENSTRUG00000023008	gig2p	61	54.615	Takifugu_rubripes
ENSAMXG00000016000	-	90	59.200	ENSXETG00000032410	-	84	59.200	Xenopus_tropicalis
ENSAMXG00000016000	-	80	54.762	ENSXMAG00000019444	-	56	54.762	Xiphophorus_maculatus