EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016051 (Gene tree)
Gene ID: 103041503
Gene Symbol: -
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 187291 bases
Position: chrAPWO02000113.1:2419686-2606976
Accession: 103041503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016530	cwf21	PF08312.12	4.7e-15	1	1
ENSAMXP00000016530	SRRM_C	PF15230.6	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016530	-	2997	XM_022665775	ENSAMXP00000016530	626 (aa)	XP_022521496	W5L9L8

Gene Model

Click here to download ENSAMXG00000016051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016051	-	87	56.507	ENSAPOG00000000288	SRRM3	87	55.479	Acanthochromis_polyacanthus
ENSAMXG00000016051	-	87	55.594	ENSACLG00000005269	SRRM3	87	53.596	Astatotilapia_calliptera
ENSAMXG00000016051	-	87	48.048	ENSCPBG00000027784	SRRM3	90	48.567	Chrysemys_picta_bellii
ENSAMXG00000016051	-	87	52.801	ENSCSEG00000010978	-	80	52.881	Cynoglossus_semilaevis
ENSAMXG00000016051	-	87	51.801	ENSGAFG00000014777	SRRM3	87	52.422	Gambusia_affinis
ENSAMXG00000016051	-	87	48.129	ENSGAGG00000021058	SRRM3	96	47.885	Gopherus_agassizii
ENSAMXG00000016051	-	88	56.089	ENSHBUG00000005061	SRRM3	87	54.017	Haplochromis_burtoni
ENSAMXG00000016051	-	87	74.147	ENSIPUG00000012467	srrm3	87	75.583	Ictalurus_punctatus
ENSAMXG00000016051	-	88	51.163	ENSKMAG00000013495	SRRM3	87	53.401	Kryptolebias_marmoratus
ENSAMXG00000016051	-	78	44.630	ENSLACG00000008008	SRRM3	96	43.126	Latimeria_chalumnae
ENSAMXG00000016051	-	52	61.329	ENSLOCG00000002879	SRRM3	98	62.651	Lepisosteus_oculatus
ENSAMXG00000016051	-	89	55.109	ENSMALG00000000844	-	89	53.413	Monopterus_albus
ENSAMXG00000016051	-	53	52.023	ENSONIG00000012732	-	99	45.349	Oreochromis_niloticus
ENSAMXG00000016051	-	100	52.576	ENSORLG00000026242	-	89	51.300	Oryzias_latipes
ENSAMXG00000016051	-	100	52.424	ENSORLG00020016592	-	89	51.300	Oryzias_latipes_hni
ENSAMXG00000016051	-	100	52.252	ENSORLG00015022712	SRRM3	89	50.940	Oryzias_latipes_hsok
ENSAMXG00000016051	-	100	51.677	ENSOMEG00000010768	-	88	52.850	Oryzias_melastigma
ENSAMXG00000016051	-	87	55.670	ENSPKIG00000017233	SRRM3	92	55.439	Paramormyrops_kingsleyae
ENSAMXG00000016051	-	61	68.841	ENSPFOG00000009007	SRRM3	89	45.408	Poecilia_formosa
ENSAMXG00000016051	-	87	52.870	ENSPMEG00000011981	-	87	51.557	Poecilia_mexicana
ENSAMXG00000016051	-	87	53.195	ENSPREG00000008138	-	87	52.768	Poecilia_reticulata
ENSAMXG00000016051	-	87	83.935	ENSPNAG00000009621	SRRM3	87	86.101	Pygocentrus_nattereri
ENSAMXG00000016051	-	60	55.614	ENSSFOG00015001696	SRRM3	89	57.937	Scleropages_formosus
ENSAMXG00000016051	-	87	56.485	ENSSMAG00000000476	SRRM3	88	54.949	Scophthalmus_maximus
ENSAMXG00000016051	-	87	57.358	ENSSLDG00000020070	SRRM3	87	55.537	Seriola_lalandi_dorsalis
ENSAMXG00000016051	-	81	49.369	ENSTNIG00000008549	-	84	48.208	Tetraodon_nigroviridis
ENSAMXG00000016051	-	54	55.866	ENSXMAG00000005663	-	87	52.422	Xiphophorus_maculatus