EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016080 (Gene tree)
Gene ID: 103035881
Gene Symbol: gnl1
Alias: zgc:154008
Full Name: G protein nucleolar 1 (putative)
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 15229 bases
Position: chrAPWO02000026.1:1504635-1519863
Accession: 103035881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028332	MMR_HSR1	PF01926.23	1.6e-13	1	1
ENSAMXP00000016557	MMR_HSR1	PF01926.23	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057676	-	1719	-	ENSAMXP00000028332	572 (aa)	-	-
ENSAMXT00000016557	-	1771	XM_022666978	ENSAMXP00000016557	590 (aa)	XP_022522699	W5L9P5

Gene Model

Click here to download ENSAMXG00000016080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016080	gnl1	91	58.484	ENSG00000204590	GNL1	92	58.140	Homo_sapiens
ENSAMXG00000016080	gnl1	100	70.292	ENSAPOG00000006315	gnl1	100	70.033	Acanthochromis_polyacanthus
ENSAMXG00000016080	gnl1	99	53.323	ENSAMEG00000013421	GNL1	92	58.497	Ailuropoda_melanoleuca
ENSAMXG00000016080	gnl1	100	71.237	ENSACIG00000013539	gnl1	100	70.924	Amphilophus_citrinellus
ENSAMXG00000016080	gnl1	100	70.081	ENSAOCG00000008320	gnl1	100	70.147	Amphiprion_ocellaris
ENSAMXG00000016080	gnl1	100	70.909	ENSAPEG00000011154	gnl1	100	70.978	Amphiprion_percula
ENSAMXG00000016080	gnl1	100	68.954	ENSATEG00000020647	gnl1	100	69.067	Anabas_testudineus
ENSAMXG00000016080	gnl1	89	58.867	ENSACAG00000010395	GNL1	89	57.876	Anolis_carolinensis
ENSAMXG00000016080	gnl1	99	53.834	ENSANAG00000028106	GNL1	92	57.932	Aotus_nancymaae
ENSAMXG00000016080	gnl1	100	69.707	ENSACLG00000025394	gnl1	100	69.394	Astatotilapia_calliptera
ENSAMXG00000016080	gnl1	99	53.344	ENSBTAG00000025516	GNL1	92	58.318	Bos_taurus
ENSAMXG00000016080	gnl1	99	53.809	ENSCJAG00000019996	GNL1	92	57.932	Callithrix_jacchus
ENSAMXG00000016080	gnl1	99	53.181	ENSCAFG00000000396	GNL1	92	58.140	Canis_familiaris
ENSAMXG00000016080	gnl1	99	53.181	ENSCAFG00020017556	GNL1	92	58.140	Canis_lupus_dingo
ENSAMXG00000016080	gnl1	99	53.398	ENSCHIG00000019763	GNL1	92	58.318	Capra_hircus
ENSAMXG00000016080	gnl1	99	53.344	ENSTSYG00000000164	GNL1	92	58.140	Carlito_syrichta
ENSAMXG00000016080	gnl1	87	52.583	ENSCAPG00000006662	GNL1	88	57.732	Cavia_aperea
ENSAMXG00000016080	gnl1	99	52.836	ENSCPOG00000001944	GNL1	91	57.321	Cavia_porcellus
ENSAMXG00000016080	gnl1	99	53.846	ENSCCAG00000037467	GNL1	92	58.140	Cebus_capucinus
ENSAMXG00000016080	gnl1	99	53.821	ENSCATG00000045232	GNL1	92	58.318	Cercocebus_atys
ENSAMXG00000016080	gnl1	92	52.373	ENSCLAG00000012557	GNL1	90	56.685	Chinchilla_lanigera
ENSAMXG00000016080	gnl1	99	53.821	ENSCSAG00000008202	GNL1	92	58.318	Chlorocebus_sabaeus
ENSAMXG00000016080	gnl1	86	48.821	ENSCHOG00000010907	GNL1	75	62.500	Choloepus_hoffmanni
ENSAMXG00000016080	gnl1	89	59.450	ENSCPBG00000018821	GNL1	91	59.357	Chrysemys_picta_bellii
ENSAMXG00000016080	gnl1	89	47.575	ENSCING00000014499	-	100	47.523	Ciona_intestinalis
ENSAMXG00000016080	gnl1	95	45.487	ENSCSAVG00000007354	-	92	46.266	Ciona_savignyi
ENSAMXG00000016080	gnl1	99	53.659	ENSCANG00000012933	GNL1	92	58.140	Colobus_angolensis_palliatus
ENSAMXG00000016080	gnl1	99	52.932	ENSCGRG00001004986	Gnl1	91	58.214	Cricetulus_griseus_chok1gshd
ENSAMXG00000016080	gnl1	92	52.465	ENSCGRG00000014309	Gnl1	90	57.519	Cricetulus_griseus_crigri
ENSAMXG00000016080	gnl1	95	62.635	ENSCSEG00000019714	gnl1	91	64.865	Cynoglossus_semilaevis
ENSAMXG00000016080	gnl1	100	66.993	ENSCVAG00000022650	gnl1	100	66.993	Cyprinodon_variegatus
ENSAMXG00000016080	gnl1	100	73.582	ENSDARG00000061789	gnl1	100	76.442	Danio_rerio
ENSAMXG00000016080	gnl1	99	50.081	ENSDNOG00000041571	GNL1	92	51.408	Dasypus_novemcinctus
ENSAMXG00000016080	gnl1	93	39.416	FBgn0032882	Ns4	82	40.447	Drosophila_melanogaster
ENSAMXG00000016080	gnl1	51	52.201	ENSETEG00000005518	-	83	60.153	Echinops_telfairi
ENSAMXG00000016080	gnl1	99	53.507	ENSEASG00005018610	GNL1	92	58.497	Equus_asinus_asinus
ENSAMXG00000016080	gnl1	99	53.507	ENSECAG00000023081	GNL1	92	58.497	Equus_caballus
ENSAMXG00000016080	gnl1	100	68.013	ENSELUG00000006281	gnl1	100	68.336	Esox_lucius
ENSAMXG00000016080	gnl1	99	53.018	ENSFCAG00000007676	GNL1	92	57.782	Felis_catus
ENSAMXG00000016080	gnl1	87	54.135	ENSFDAG00000000584	GNL1	90	59.081	Fukomys_damarensis
ENSAMXG00000016080	gnl1	100	66.176	ENSFHEG00000011353	gnl1	100	66.013	Fundulus_heteroclitus
ENSAMXG00000016080	gnl1	99	67.987	ENSGMOG00000015224	gnl1	100	66.337	Gadus_morhua
ENSAMXG00000016080	gnl1	99	68.040	ENSGAFG00000014611	gnl1	99	68.040	Gambusia_affinis
ENSAMXG00000016080	gnl1	99	67.374	ENSGACG00000009765	gnl1	100	65.090	Gasterosteus_aculeatus
ENSAMXG00000016080	gnl1	91	58.303	ENSGGOG00000014590	GNL1	92	57.961	Gorilla_gorilla
ENSAMXG00000016080	gnl1	100	69.544	ENSHBUG00000016745	gnl1	100	69.394	Haplochromis_burtoni
ENSAMXG00000016080	gnl1	99	53.247	ENSHGLG00000017193	GNL1	91	57.679	Heterocephalus_glaber_female
ENSAMXG00000016080	gnl1	87	52.158	ENSHGLG00100009994	GNL1	90	57.083	Heterocephalus_glaber_male
ENSAMXG00000016080	gnl1	100	66.340	ENSHCOG00000012493	gnl1	100	66.393	Hippocampus_comes
ENSAMXG00000016080	gnl1	100	74.545	ENSIPUG00000004850	gnl1	100	72.893	Ictalurus_punctatus
ENSAMXG00000016080	gnl1	99	52.941	ENSSTOG00000011822	GNL1	92	58.065	Ictidomys_tridecemlineatus
ENSAMXG00000016080	gnl1	99	52.913	ENSJJAG00000010831	-	91	58.318	Jaculus_jaculus
ENSAMXG00000016080	gnl1	99	68.903	ENSKMAG00000009059	gnl1	99	69.231	Kryptolebias_marmoratus
ENSAMXG00000016080	gnl1	99	66.722	ENSLBEG00000011038	gnl1	99	67.053	Labrus_bergylta
ENSAMXG00000016080	gnl1	99	53.821	ENSLACG00000001713	GNL1	91	57.932	Latimeria_chalumnae
ENSAMXG00000016080	gnl1	99	53.595	ENSLAFG00000030406	GNL1	92	58.214	Loxodonta_africana
ENSAMXG00000016080	gnl1	99	53.821	ENSMFAG00000001167	GNL1	92	58.318	Macaca_fascicularis
ENSAMXG00000016080	gnl1	99	53.821	ENSMMUG00000020077	GNL1	92	58.318	Macaca_mulatta
ENSAMXG00000016080	gnl1	99	53.821	ENSMNEG00000031618	GNL1	92	58.318	Macaca_nemestrina
ENSAMXG00000016080	gnl1	99	53.821	ENSMLEG00000030252	GNL1	92	58.318	Mandrillus_leucophaeus
ENSAMXG00000016080	gnl1	100	68.842	ENSMAMG00000003554	gnl1	100	68.903	Mastacembelus_armatus
ENSAMXG00000016080	gnl1	100	69.707	ENSMZEG00005018216	gnl1	100	69.394	Maylandia_zebra
ENSAMXG00000016080	gnl1	99	52.606	ENSMAUG00000015596	Gnl1	91	56.964	Mesocricetus_auratus
ENSAMXG00000016080	gnl1	99	53.236	ENSMICG00000014708	GNL1	92	58.036	Microcebus_murinus
ENSAMXG00000016080	gnl1	99	53.018	ENSMOCG00000020934	Gnl1	92	58.214	Microtus_ochrogaster
ENSAMXG00000016080	gnl1	100	69.732	ENSMMOG00000015833	gnl1	100	70.134	Mola_mola
ENSAMXG00000016080	gnl1	89	59.199	ENSMODG00000015964	GNL1	87	58.750	Monodelphis_domestica
ENSAMXG00000016080	gnl1	100	67.374	ENSMALG00000022523	gnl1	100	66.993	Monopterus_albus
ENSAMXG00000016080	gnl1	91	58.393	MGP_CAROLIEiJ_G0021547	Gnl1	92	57.679	Mus_caroli
ENSAMXG00000016080	gnl1	99	53.560	ENSMUSG00000024429	Gnl1	92	57.857	Mus_musculus
ENSAMXG00000016080	gnl1	99	53.398	MGP_PahariEiJ_G0020539	Gnl1	92	57.679	Mus_pahari
ENSAMXG00000016080	gnl1	99	53.236	MGP_SPRETEiJ_G0022452	Gnl1	92	57.679	Mus_spretus
ENSAMXG00000016080	gnl1	92	53.616	ENSMPUG00000011828	GNL1	71	57.815	Mustela_putorius_furo
ENSAMXG00000016080	gnl1	92	52.098	ENSMLUG00000008722	GNL1	87	57.467	Myotis_lucifugus
ENSAMXG00000016080	gnl1	99	53.670	ENSNGAG00000000745	Gnl1	92	57.961	Nannospalax_galili
ENSAMXG00000016080	gnl1	100	69.771	ENSNBRG00000020813	gnl1	100	69.458	Neolamprologus_brichardi
ENSAMXG00000016080	gnl1	91	55.216	ENSNLEG00000005058	GNL1	80	54.902	Nomascus_leucogenys
ENSAMXG00000016080	gnl1	87	51.970	ENSOPRG00000000007	GNL1	90	58.038	Ochotona_princeps
ENSAMXG00000016080	gnl1	99	52.443	ENSODEG00000018111	GNL1	91	56.964	Octodon_degus
ENSAMXG00000016080	gnl1	100	68.954	ENSONIG00000013044	gnl1	100	69.016	Oreochromis_niloticus
ENSAMXG00000016080	gnl1	91	57.040	ENSOCUG00000002110	GNL1	92	56.028	Oryctolagus_cuniculus
ENSAMXG00000016080	gnl1	90	73.761	ENSORLG00000012862	gnl1	90	73.285	Oryzias_latipes
ENSAMXG00000016080	gnl1	90	73.394	ENSORLG00020003923	gnl1	90	73.007	Oryzias_latipes_hni
ENSAMXG00000016080	gnl1	90	73.394	ENSORLG00015009552	gnl1	90	73.007	Oryzias_latipes_hsok
ENSAMXG00000016080	gnl1	100	68.464	ENSOMEG00000014409	gnl1	100	68.197	Oryzias_melastigma
ENSAMXG00000016080	gnl1	99	53.507	ENSOGAG00000004428	-	92	58.318	Otolemur_garnettii
ENSAMXG00000016080	gnl1	95	54.188	ENSOGAG00000024106	-	95	56.437	Otolemur_garnettii
ENSAMXG00000016080	gnl1	99	52.389	ENSOARG00000012966	GNL1	92	57.193	Ovis_aries
ENSAMXG00000016080	gnl1	91	58.484	ENSPPAG00000044009	GNL1	92	58.140	Pan_paniscus
ENSAMXG00000016080	gnl1	99	53.181	ENSPPRG00000007039	GNL1	92	58.140	Panthera_pardus
ENSAMXG00000016080	gnl1	99	53.018	ENSPTIG00000011307	GNL1	92	57.961	Panthera_tigris_altaica
ENSAMXG00000016080	gnl1	91	58.303	ENSPTRG00000017928	GNL1	92	57.754	Pan_troglodytes
ENSAMXG00000016080	gnl1	99	53.821	ENSPANG00000020097	GNL1	92	58.318	Papio_anubis
ENSAMXG00000016080	gnl1	100	64.830	ENSPKIG00000002200	gnl1	100	66.060	Paramormyrops_kingsleyae
ENSAMXG00000016080	gnl1	82	49.307	ENSPSIG00000008441	GNL1	86	50.099	Pelodiscus_sinensis
ENSAMXG00000016080	gnl1	100	70.558	ENSPMGG00000007259	gnl1	100	70.897	Periophthalmus_magnuspinnatus
ENSAMXG00000016080	gnl1	92	52.197	ENSPEMG00000002731	Gnl1	89	57.278	Peromyscus_maniculatus_bairdii
ENSAMXG00000016080	gnl1	89	60.146	ENSPCIG00000014975	GNL1	92	59.498	Phascolarctos_cinereus
ENSAMXG00000016080	gnl1	100	68.637	ENSPFOG00000015398	gnl1	100	68.637	Poecilia_formosa
ENSAMXG00000016080	gnl1	99	68.204	ENSPLAG00000003231	gnl1	99	68.204	Poecilia_latipinna
ENSAMXG00000016080	gnl1	100	68.637	ENSPMEG00000005001	gnl1	100	68.637	Poecilia_mexicana
ENSAMXG00000016080	gnl1	100	68.473	ENSPREG00000012818	gnl1	100	68.473	Poecilia_reticulata
ENSAMXG00000016080	gnl1	99	53.846	ENSPPYG00000016408	GNL1	92	58.140	Pongo_abelii
ENSAMXG00000016080	gnl1	59	64.748	ENSPCAG00000004522	-	70	64.748	Procavia_capensis
ENSAMXG00000016080	gnl1	99	53.344	ENSPCOG00000015669	GNL1	92	58.140	Propithecus_coquereli
ENSAMXG00000016080	gnl1	99	53.984	ENSPVAG00000003970	GNL1	91	59.034	Pteropus_vampyrus
ENSAMXG00000016080	gnl1	100	69.381	ENSPNYG00000022614	gnl1	100	69.231	Pundamilia_nyererei
ENSAMXG00000016080	gnl1	100	82.513	ENSPNAG00000021257	gnl1	100	81.494	Pygocentrus_nattereri
ENSAMXG00000016080	gnl1	99	53.722	ENSRNOG00000000798	Gnl1	92	58.036	Rattus_norvegicus
ENSAMXG00000016080	gnl1	99	53.821	ENSRBIG00000019143	GNL1	92	58.318	Rhinopithecus_bieti
ENSAMXG00000016080	gnl1	99	53.821	ENSRROG00000030029	GNL1	92	58.318	Rhinopithecus_roxellana
ENSAMXG00000016080	gnl1	99	53.846	ENSSBOG00000031909	GNL1	92	58.140	Saimiri_boliviensis_boliviensis
ENSAMXG00000016080	gnl1	99	53.871	ENSSHAG00000007557	GNL1	93	57.270	Sarcophilus_harrisii
ENSAMXG00000016080	gnl1	90	75.233	ENSSFOG00015013921	gnl1	100	66.227	Scleropages_formosus
ENSAMXG00000016080	gnl1	100	69.836	ENSSMAG00000010147	gnl1	100	68.361	Scophthalmus_maximus
ENSAMXG00000016080	gnl1	100	70.779	ENSSDUG00000013824	gnl1	100	70.636	Seriola_dumerili
ENSAMXG00000016080	gnl1	100	70.550	ENSSLDG00000024560	gnl1	100	70.407	Seriola_lalandi_dorsalis
ENSAMXG00000016080	gnl1	51	60.938	ENSSARG00000006156	-	71	65.789	Sorex_araneus
ENSAMXG00000016080	gnl1	91	55.576	ENSSPUG00000015374	GNL1	92	55.965	Sphenodon_punctatus
ENSAMXG00000016080	gnl1	100	72.195	ENSSPAG00000017541	gnl1	100	69.919	Stegastes_partitus
ENSAMXG00000016080	gnl1	99	53.344	ENSSSCG00000001372	GNL1	97	59.218	Sus_scrofa
ENSAMXG00000016080	gnl1	100	64.874	ENSTRUG00000011226	gnl1	86	71.971	Takifugu_rubripes
ENSAMXG00000016080	gnl1	99	64.107	ENSTNIG00000008017	gnl1	100	63.987	Tetraodon_nigroviridis
ENSAMXG00000016080	gnl1	99	49.592	ENSTBEG00000007538	GNL1	91	54.122	Tupaia_belangeri
ENSAMXG00000016080	gnl1	99	53.105	ENSTTRG00000008287	GNL1	92	57.527	Tursiops_truncatus
ENSAMXG00000016080	gnl1	99	53.160	ENSUAMG00000007671	GNL1	92	58.497	Ursus_americanus
ENSAMXG00000016080	gnl1	99	50.403	ENSUMAG00000018935	GNL1	91	55.496	Ursus_maritimus
ENSAMXG00000016080	gnl1	99	53.181	ENSVVUG00000009537	GNL1	92	58.140	Vulpes_vulpes
ENSAMXG00000016080	gnl1	99	51.329	ENSXETG00000024087	gnl1	100	51.329	Xenopus_tropicalis
ENSAMXG00000016080	gnl1	100	69.179	ENSXCOG00000019185	gnl1	100	69.179	Xiphophorus_couchianus
ENSAMXG00000016080	gnl1	100	68.309	ENSXMAG00000011015	gnl1	100	68.309	Xiphophorus_maculatus