EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016168 (Gene tree)
Gene ID: 103027968
Gene Symbol: setdb1b
Alias: im:7143091|wu:fa04a12|wu:fj80h02|zgc:152899
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 18021 bases
Position: chr11:5503531-5521551
Accession: 103027968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016657	MBD	PF01429.19	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016657	-	3363	XM_022674041	ENSAMXP00000016657	1120 (aa)	XP_022529762	W5L9Z5

Gene Model

Click here to download ENSAMXG00000016168's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016168	setdb1b	81	74.286	ENSG00000143379	SETDB1	84	67.000	Homo_sapiens
ENSAMXG00000016168	setdb1b	91	75.158	ENSAPOG00000016228	setdb1b	93	74.029	Acanthochromis_polyacanthus
ENSAMXG00000016168	setdb1b	80	74.286	ENSAMEG00000001160	SETDB1	90	59.866	Ailuropoda_melanoleuca
ENSAMXG00000016168	setdb1b	99	75.267	ENSACIG00000007359	setdb1b	93	73.116	Amphilophus_citrinellus
ENSAMXG00000016168	setdb1b	98	74.419	ENSAOCG00000005586	setdb1b	93	72.485	Amphiprion_ocellaris
ENSAMXG00000016168	setdb1b	81	73.784	ENSAPEG00000007774	setdb1b	93	72.802	Amphiprion_percula
ENSAMXG00000016168	setdb1b	90	76.050	ENSATEG00000023520	setdb1b	93	73.878	Anabas_testudineus
ENSAMXG00000016168	setdb1b	99	66.505	ENSAPLG00000013908	SETDB1	85	66.176	Anas_platyrhynchos
ENSAMXG00000016168	setdb1b	81	74.286	ENSANAG00000001819	SETDB1	92	60.201	Aotus_nancymaae
ENSAMXG00000016168	setdb1b	98	75.899	ENSACLG00000020489	setdb1b	93	73.984	Astatotilapia_calliptera
ENSAMXG00000016168	setdb1b	81	75.000	ENSBTAG00000000098	SETDB1	90	59.866	Bos_taurus
ENSAMXG00000016168	setdb1b	81	74.286	ENSCJAG00000006972	SETDB1	90	59.866	Callithrix_jacchus
ENSAMXG00000016168	setdb1b	80	74.286	ENSCAFG00000023501	SETDB1	83	67.500	Canis_familiaris
ENSAMXG00000016168	setdb1b	97	74.286	ENSCAFG00020013596	SETDB1	86	67.500	Canis_lupus_dingo
ENSAMXG00000016168	setdb1b	82	74.286	ENSCHIG00000010698	SETDB1	84	67.000	Capra_hircus
ENSAMXG00000016168	setdb1b	65	59.468	ENSTSYG00000012646	SETDB1	86	59.866	Carlito_syrichta
ENSAMXG00000016168	setdb1b	66	79.808	ENSCAPG00000013619	SETDB1	96	50.515	Cavia_aperea
ENSAMXG00000016168	setdb1b	98	74.286	ENSCPOG00000001632	SETDB1	90	59.532	Cavia_porcellus
ENSAMXG00000016168	setdb1b	81	74.286	ENSCCAG00000024882	SETDB1	84	67.000	Cebus_capucinus
ENSAMXG00000016168	setdb1b	80	74.857	ENSCATG00000044888	SETDB1	90	60.201	Cercocebus_atys
ENSAMXG00000016168	setdb1b	82	74.286	ENSCLAG00000000242	SETDB1	90	59.532	Chinchilla_lanigera
ENSAMXG00000016168	setdb1b	63	74.694	ENSCSAG00000018034	SETDB1	88	59.866	Chlorocebus_sabaeus
ENSAMXG00000016168	setdb1b	95	78.767	ENSCHOG00000004013	SETDB1	80	78.472	Choloepus_hoffmanni
ENSAMXG00000016168	setdb1b	99	66.502	ENSCPBG00000008716	SETDB1	88	65.517	Chrysemys_picta_bellii
ENSAMXG00000016168	setdb1b	83	74.286	ENSCANG00000036388	SETDB1	89	59.468	Colobus_angolensis_palliatus
ENSAMXG00000016168	setdb1b	99	57.096	ENSCGRG00001010822	Setdb1	90	59.076	Cricetulus_griseus_chok1gshd
ENSAMXG00000016168	setdb1b	99	57.096	ENSCGRG00000005953	Setdb1	90	59.076	Cricetulus_griseus_crigri
ENSAMXG00000016168	setdb1b	98	72.990	ENSCSEG00000002988	setdb1b	93	73.608	Cynoglossus_semilaevis
ENSAMXG00000016168	setdb1b	99	73.181	ENSCVAG00000008877	setdb1b	93	71.573	Cyprinodon_variegatus
ENSAMXG00000016168	setdb1b	65	84.694	ENSDARG00000041243	setdb1a	63	84.694	Danio_rerio
ENSAMXG00000016168	setdb1b	100	83.369	ENSDARG00000099021	setdb1b	94	81.366	Danio_rerio
ENSAMXG00000016168	setdb1b	81	74.286	ENSDNOG00000007754	SETDB1	90	58.746	Dasypus_novemcinctus
ENSAMXG00000016168	setdb1b	88	74.419	ENSDORG00000006830	Setdb1	90	58.746	Dipodomys_ordii
ENSAMXG00000016168	setdb1b	64	47.038	ENSEBUG00000005735	setdb1b	88	47.217	Eptatretus_burgeri
ENSAMXG00000016168	setdb1b	81	74.286	ENSEASG00005002061	SETDB1	90	59.532	Equus_asinus_asinus
ENSAMXG00000016168	setdb1b	81	74.286	ENSECAG00000023954	SETDB1	90	59.532	Equus_caballus
ENSAMXG00000016168	setdb1b	74	84.211	ENSEEUG00000015825	SETDB1	65	75.229	Erinaceus_europaeus
ENSAMXG00000016168	setdb1b	69	70.213	ENSELUG00000006204	-	70	70.213	Esox_lucius
ENSAMXG00000016168	setdb1b	98	77.468	ENSELUG00000013948	setdb1b	93	75.417	Esox_lucius
ENSAMXG00000016168	setdb1b	80	74.286	ENSFCAG00000009655	SETDB1	90	61.592	Felis_catus
ENSAMXG00000016168	setdb1b	82	74.286	ENSFDAG00000021515	SETDB1	90	59.396	Fukomys_damarensis
ENSAMXG00000016168	setdb1b	95	74.059	ENSFHEG00000022195	setdb1b	93	73.225	Fundulus_heteroclitus
ENSAMXG00000016168	setdb1b	98	66.667	ENSGMOG00000005993	setdb1b	93	65.209	Gadus_morhua
ENSAMXG00000016168	setdb1b	99	68.627	ENSGALG00000024051	SETDB1	78	68.812	Gallus_gallus
ENSAMXG00000016168	setdb1b	90	72.769	ENSGAFG00000012805	setdb1b	93	70.732	Gambusia_affinis
ENSAMXG00000016168	setdb1b	90	73.000	ENSGACG00000011675	setdb1b	94	65.730	Gasterosteus_aculeatus
ENSAMXG00000016168	setdb1b	99	65.854	ENSGAGG00000005348	SETDB1	88	65.517	Gopherus_agassizii
ENSAMXG00000016168	setdb1b	81	74.286	ENSGGOG00000016308	SETDB1	84	67.000	Gorilla_gorilla
ENSAMXG00000016168	setdb1b	98	75.899	ENSHBUG00000004618	setdb1b	93	74.333	Haplochromis_burtoni
ENSAMXG00000016168	setdb1b	82	74.286	ENSHGLG00000011098	SETDB1	84	67.500	Heterocephalus_glaber_female
ENSAMXG00000016168	setdb1b	82	74.286	ENSHGLG00100009789	SETDB1	88	67.500	Heterocephalus_glaber_male
ENSAMXG00000016168	setdb1b	98	72.537	ENSHCOG00000014567	setdb1b	93	72.709	Hippocampus_comes
ENSAMXG00000016168	setdb1b	74	66.906	ENSIPUG00000007923	setdb1a	64	84.536	Ictalurus_punctatus
ENSAMXG00000016168	setdb1b	100	85.376	ENSIPUG00000004536	setdb1	95	82.672	Ictalurus_punctatus
ENSAMXG00000016168	setdb1b	89	74.286	ENSSTOG00000006770	SETDB1	91	59.076	Ictidomys_tridecemlineatus
ENSAMXG00000016168	setdb1b	90	72.917	ENSKMAG00000001197	setdb1b	94	71.053	Kryptolebias_marmoratus
ENSAMXG00000016168	setdb1b	98	73.739	ENSLBEG00000025862	setdb1b	93	72.165	Labrus_bergylta
ENSAMXG00000016168	setdb1b	99	65.347	ENSLACG00000011159	SETDB1	88	65.500	Latimeria_chalumnae
ENSAMXG00000016168	setdb1b	91	74.286	ENSLAFG00000004006	SETDB1	91	59.866	Loxodonta_africana
ENSAMXG00000016168	setdb1b	81	74.286	ENSMFAG00000042328	SETDB1	90	60.201	Macaca_fascicularis
ENSAMXG00000016168	setdb1b	81	74.286	ENSMMUG00000023235	SETDB1	84	67.000	Macaca_mulatta
ENSAMXG00000016168	setdb1b	81	74.286	ENSMNEG00000017223	SETDB1	90	60.201	Macaca_nemestrina
ENSAMXG00000016168	setdb1b	81	74.286	ENSMLEG00000033050	SETDB1	90	60.201	Mandrillus_leucophaeus
ENSAMXG00000016168	setdb1b	94	73.362	ENSMAMG00000015176	setdb1b	80	73.265	Mastacembelus_armatus
ENSAMXG00000016168	setdb1b	98	75.899	ENSMZEG00005016099	setdb1b	93	73.984	Maylandia_zebra
ENSAMXG00000016168	setdb1b	93	52.206	ENSMGAG00000001018	SETDB1	88	52.239	Meleagris_gallopavo
ENSAMXG00000016168	setdb1b	83	75.429	ENSMAUG00000021391	Setdb1	90	59.406	Mesocricetus_auratus
ENSAMXG00000016168	setdb1b	89	74.286	ENSMICG00000000425	SETDB1	84	67.000	Microcebus_murinus
ENSAMXG00000016168	setdb1b	90	74.286	ENSMOCG00000017407	Setdb1	92	53.782	Microtus_ochrogaster
ENSAMXG00000016168	setdb1b	98	74.316	ENSMMOG00000016162	setdb1b	92	74.526	Mola_mola
ENSAMXG00000016168	setdb1b	96	74.699	ENSMODG00000018821	SETDB1	74	74.390	Monodelphis_domestica
ENSAMXG00000016168	setdb1b	98	72.727	ENSMALG00000007801	setdb1b	89	82.759	Monopterus_albus
ENSAMXG00000016168	setdb1b	81	61.246	MGP_CAROLIEiJ_G0025342	Setdb1	92	59.076	Mus_caroli
ENSAMXG00000016168	setdb1b	89	74.857	ENSMUSG00000015697	Setdb1	90	59.076	Mus_musculus
ENSAMXG00000016168	setdb1b	80	74.286	ENSMPUG00000004298	SETDB1	90	59.866	Mustela_putorius_furo
ENSAMXG00000016168	setdb1b	88	74.286	ENSMLUG00000010486	SETDB1	84	67.000	Myotis_lucifugus
ENSAMXG00000016168	setdb1b	97	74.286	ENSNGAG00000020151	Setdb1	83	67.000	Nannospalax_galili
ENSAMXG00000016168	setdb1b	98	75.480	ENSNBRG00000003147	setdb1b	93	74.280	Neolamprologus_brichardi
ENSAMXG00000016168	setdb1b	80	68.617	ENSNLEG00000009996	SETDB1	84	62.441	Nomascus_leucogenys
ENSAMXG00000016168	setdb1b	83	74.286	ENSMEUG00000006544	-	71	69.608	Notamacropus_eugenii
ENSAMXG00000016168	setdb1b	98	52.174	ENSMEUG00000000555	-	92	50.709	Notamacropus_eugenii
ENSAMXG00000016168	setdb1b	95	60.417	ENSOPRG00000015349	SETDB1	92	58.667	Ochotona_princeps
ENSAMXG00000016168	setdb1b	82	74.286	ENSODEG00000012471	SETDB1	84	67.000	Octodon_degus
ENSAMXG00000016168	setdb1b	98	76.310	ENSONIG00000006454	setdb1b	93	74.745	Oreochromis_niloticus
ENSAMXG00000016168	setdb1b	80	71.429	ENSOCUG00000003642	SETDB1	84	67.000	Oryctolagus_cuniculus
ENSAMXG00000016168	setdb1b	81	74.583	ENSORLG00000010602	setdb1b	93	73.939	Oryzias_latipes
ENSAMXG00000016168	setdb1b	54	83.721	ENSORLG00020008638	setdb1b	91	78.495	Oryzias_latipes_hni
ENSAMXG00000016168	setdb1b	81	73.814	ENSORLG00015014543	setdb1b	93	73.200	Oryzias_latipes_hsok
ENSAMXG00000016168	setdb1b	98	73.729	ENSOMEG00000009457	setdb1b	93	74.494	Oryzias_melastigma
ENSAMXG00000016168	setdb1b	80	74.286	ENSOGAG00000010320	SETDB1	84	67.000	Otolemur_garnettii
ENSAMXG00000016168	setdb1b	82	74.286	ENSOARG00000020880	SETDB1	90	59.866	Ovis_aries
ENSAMXG00000016168	setdb1b	81	74.286	ENSPPAG00000041015	SETDB1	84	67.000	Pan_paniscus
ENSAMXG00000016168	setdb1b	81	74.286	ENSPPRG00000005462	SETDB1	90	59.406	Panthera_pardus
ENSAMXG00000016168	setdb1b	81	74.286	ENSPTIG00000014233	SETDB1	90	60.066	Panthera_tigris_altaica
ENSAMXG00000016168	setdb1b	81	74.286	ENSPTRG00000001267	SETDB1	84	67.000	Pan_troglodytes
ENSAMXG00000016168	setdb1b	81	74.286	ENSPANG00000020214	SETDB1	90	52.108	Papio_anubis
ENSAMXG00000016168	setdb1b	98	73.441	ENSPKIG00000010963	setdb1b	93	74.245	Paramormyrops_kingsleyae
ENSAMXG00000016168	setdb1b	50	66.667	ENSPSIG00000008407	SETDB1	76	66.667	Pelodiscus_sinensis
ENSAMXG00000016168	setdb1b	77	59.008	ENSPEMG00000010553	Setdb1	92	58.804	Peromyscus_maniculatus_bairdii
ENSAMXG00000016168	setdb1b	96	70.760	ENSPMAG00000001573	setdb1b	84	68.421	Petromyzon_marinus
ENSAMXG00000016168	setdb1b	99	74.627	ENSPFOG00000004429	setdb1b	91	85.093	Poecilia_formosa
ENSAMXG00000016168	setdb1b	98	73.276	ENSPFOG00000004623	-	86	72.650	Poecilia_formosa
ENSAMXG00000016168	setdb1b	91	71.625	ENSPLAG00000017117	setdb1b	93	69.623	Poecilia_latipinna
ENSAMXG00000016168	setdb1b	94	73.895	ENSPLAG00000019076	-	94	71.984	Poecilia_latipinna
ENSAMXG00000016168	setdb1b	93	73.684	ENSPMEG00000006468	setdb1b	93	71.779	Poecilia_mexicana
ENSAMXG00000016168	setdb1b	96	73.895	ENSPREG00000017459	setdb1b	93	71.984	Poecilia_reticulata
ENSAMXG00000016168	setdb1b	81	74.286	ENSPPYG00000000887	SETDB1	90	59.866	Pongo_abelii
ENSAMXG00000016168	setdb1b	65	59.406	ENSPCAG00000002527	SETDB1	81	59.406	Procavia_capensis
ENSAMXG00000016168	setdb1b	81	74.286	ENSPCOG00000027869	SETDB1	90	59.866	Propithecus_coquereli
ENSAMXG00000016168	setdb1b	80	64.173	ENSPVAG00000004355	SETDB1	81	62.030	Pteropus_vampyrus
ENSAMXG00000016168	setdb1b	98	74.684	ENSPNYG00000003997	setdb1b	91	75.957	Pundamilia_nyererei
ENSAMXG00000016168	setdb1b	100	86.555	ENSPNAG00000021617	setdb1b	95	84.490	Pygocentrus_nattereri
ENSAMXG00000016168	setdb1b	81	59.298	ENSRNOG00000021143	Setdb1	90	59.197	Rattus_norvegicus
ENSAMXG00000016168	setdb1b	81	74.286	ENSRBIG00000042359	SETDB1	90	59.866	Rhinopithecus_bieti
ENSAMXG00000016168	setdb1b	81	74.286	ENSRROG00000032628	SETDB1	90	59.866	Rhinopithecus_roxellana
ENSAMXG00000016168	setdb1b	81	74.286	ENSSBOG00000028608	SETDB1	91	59.532	Saimiri_boliviensis_boliviensis
ENSAMXG00000016168	setdb1b	97	74.286	ENSSHAG00000012701	SETDB1	92	52.769	Sarcophilus_harrisii
ENSAMXG00000016168	setdb1b	98	73.747	ENSSFOG00015022183	setdb1	93	74.349	Scleropages_formosus
ENSAMXG00000016168	setdb1b	90	73.554	ENSSMAG00000015398	setdb1b	93	73.347	Scophthalmus_maximus
ENSAMXG00000016168	setdb1b	99	74.633	ENSSDUG00000007513	setdb1b	93	73.780	Seriola_dumerili
ENSAMXG00000016168	setdb1b	98	74.843	ENSSLDG00000015209	setdb1b	93	73.984	Seriola_lalandi_dorsalis
ENSAMXG00000016168	setdb1b	99	52.564	ENSSPUG00000002969	SETDB1	92	52.564	Sphenodon_punctatus
ENSAMXG00000016168	setdb1b	97	74.857	ENSSSCG00000006645	SETDB1	91	59.197	Sus_scrofa
ENSAMXG00000016168	setdb1b	92	70.787	ENSTGUG00000004684	SETDB1	86	63.547	Taeniopygia_guttata
ENSAMXG00000016168	setdb1b	100	71.670	ENSTRUG00000014641	setdb1b	93	72.041	Takifugu_rubripes
ENSAMXG00000016168	setdb1b	98	63.469	ENSTNIG00000008065	setdb1b	92	62.230	Tetraodon_nigroviridis
ENSAMXG00000016168	setdb1b	74	74.286	ENSTBEG00000009306	SETDB1	92	59.866	Tupaia_belangeri
ENSAMXG00000016168	setdb1b	65	76.027	ENSTTRG00000006966	SETDB1	76	59.197	Tursiops_truncatus
ENSAMXG00000016168	setdb1b	80	74.286	ENSUAMG00000026724	SETDB1	90	59.866	Ursus_americanus
ENSAMXG00000016168	setdb1b	81	74.286	ENSUMAG00000003141	SETDB1	91	59.866	Ursus_maritimus
ENSAMXG00000016168	setdb1b	58	84.211	ENSVPAG00000005440	SETDB1	70	75.229	Vicugna_pacos
ENSAMXG00000016168	setdb1b	80	74.286	ENSVVUG00000011637	SETDB1	90	59.866	Vulpes_vulpes
ENSAMXG00000016168	setdb1b	97	75.862	ENSXETG00000008936	setdb1	84	68.159	Xenopus_tropicalis
ENSAMXG00000016168	setdb1b	98	77.083	ENSXCOG00000019497	setdb1b	83	77.083	Xiphophorus_couchianus
ENSAMXG00000016168	setdb1b	95	75.789	ENSXMAG00000016600	setdb1b	93	73.211	Xiphophorus_maculatus