EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016236 (Gene tree)
Gene ID: 103043090
Gene Symbol: tnpo3
Alias: zgc:55409
Full Name: transportin 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 26376 bases
Position: chr7:30307626-30334001
Accession: 103043090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016745	Xpo1	PF08389.12	4.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016745	-	8034	XM_007245012	ENSAMXP00000016745	923 (aa)	XP_007245074	W5LA83

Gene Model

Click here to download ENSAMXG00000016236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016236	tnpo3	100	86.241	ENSG00000064419	TNPO3	100	86.241	Homo_sapiens
ENSAMXG00000016236	tnpo3	100	93.499	ENSAPOG00000018347	tnpo3	100	93.499	Acanthochromis_polyacanthus
ENSAMXG00000016236	tnpo3	99	83.193	ENSAMEG00000005135	TNPO3	98	83.193	Ailuropoda_melanoleuca
ENSAMXG00000016236	tnpo3	96	90.225	ENSACIG00000005897	tnpo3	100	90.225	Amphilophus_citrinellus
ENSAMXG00000016236	tnpo3	100	93.608	ENSAOCG00000008264	tnpo3	100	93.608	Amphiprion_ocellaris
ENSAMXG00000016236	tnpo3	96	93.658	ENSAPEG00000024300	tnpo3	100	93.658	Amphiprion_percula
ENSAMXG00000016236	tnpo3	100	92.308	ENSATEG00000003197	tnpo3	100	92.308	Anabas_testudineus
ENSAMXG00000016236	tnpo3	72	82.623	ENSAPLG00000005946	TNPO3	91	82.623	Anas_platyrhynchos
ENSAMXG00000016236	tnpo3	82	85.263	ENSACAG00000013470	TNPO3	95	85.263	Anolis_carolinensis
ENSAMXG00000016236	tnpo3	100	86.241	ENSANAG00000037940	TNPO3	100	86.241	Aotus_nancymaae
ENSAMXG00000016236	tnpo3	100	92.741	ENSACLG00000005561	tnpo3	100	92.741	Astatotilapia_calliptera
ENSAMXG00000016236	tnpo3	100	86.349	ENSBTAG00000004992	TNPO3	100	86.349	Bos_taurus
ENSAMXG00000016236	tnpo3	100	86.349	ENSCJAG00000018085	TNPO3	100	86.349	Callithrix_jacchus
ENSAMXG00000016236	tnpo3	100	86.241	ENSCAFG00000001543	TNPO3	100	86.241	Canis_familiaris
ENSAMXG00000016236	tnpo3	100	86.241	ENSCAFG00020022462	TNPO3	99	85.853	Canis_lupus_dingo
ENSAMXG00000016236	tnpo3	100	86.457	ENSCHIG00000011721	TNPO3	100	86.457	Capra_hircus
ENSAMXG00000016236	tnpo3	100	86.349	ENSTSYG00000002989	TNPO3	100	86.349	Carlito_syrichta
ENSAMXG00000016236	tnpo3	72	86.022	ENSCAPG00000005843	TNPO3	91	86.022	Cavia_aperea
ENSAMXG00000016236	tnpo3	100	86.024	ENSCPOG00000039784	TNPO3	100	86.024	Cavia_porcellus
ENSAMXG00000016236	tnpo3	100	86.349	ENSCCAG00000033826	TNPO3	100	86.349	Cebus_capucinus
ENSAMXG00000016236	tnpo3	100	86.241	ENSCATG00000030018	TNPO3	100	86.241	Cercocebus_atys
ENSAMXG00000016236	tnpo3	100	85.329	ENSCLAG00000016298	TNPO3	100	85.329	Chinchilla_lanigera
ENSAMXG00000016236	tnpo3	100	86.349	ENSCSAG00000009966	TNPO3	100	86.349	Chlorocebus_sabaeus
ENSAMXG00000016236	tnpo3	99	61.409	ENSCHOG00000011547	TNPO3	99	61.409	Choloepus_hoffmanni
ENSAMXG00000016236	tnpo3	93	84.947	ENSCPBG00000017497	TNPO3	100	84.947	Chrysemys_picta_bellii
ENSAMXG00000016236	tnpo3	99	48.693	ENSCING00000005042	-	99	48.693	Ciona_intestinalis
ENSAMXG00000016236	tnpo3	99	47.437	ENSCSAVG00000008623	-	94	53.818	Ciona_savignyi
ENSAMXG00000016236	tnpo3	100	86.241	ENSCANG00000033070	TNPO3	100	86.241	Colobus_angolensis_palliatus
ENSAMXG00000016236	tnpo3	100	86.024	ENSCGRG00001015925	Tnpo3	100	86.024	Cricetulus_griseus_chok1gshd
ENSAMXG00000016236	tnpo3	100	86.024	ENSCGRG00000010379	Tnpo3	100	86.024	Cricetulus_griseus_crigri
ENSAMXG00000016236	tnpo3	100	91.333	ENSCSEG00000005952	tnpo3	100	91.333	Cynoglossus_semilaevis
ENSAMXG00000016236	tnpo3	100	91.766	ENSCVAG00000020285	tnpo3	100	91.766	Cyprinodon_variegatus
ENSAMXG00000016236	tnpo3	100	91.874	ENSDARG00000045680	tnpo3	100	91.874	Danio_rerio
ENSAMXG00000016236	tnpo3	100	86.132	ENSDNOG00000002556	TNPO3	100	86.132	Dasypus_novemcinctus
ENSAMXG00000016236	tnpo3	62	84.974	ENSDORG00000002433	Tnpo3	95	84.974	Dipodomys_ordii
ENSAMXG00000016236	tnpo3	99	43.488	FBgn0031456	Tnpo-SR	99	43.488	Drosophila_melanogaster
ENSAMXG00000016236	tnpo3	95	86.154	ENSETEG00000002101	TNPO3	90	86.154	Echinops_telfairi
ENSAMXG00000016236	tnpo3	99	70.217	ENSEBUG00000016931	tnpo3	99	70.217	Eptatretus_burgeri
ENSAMXG00000016236	tnpo3	100	86.132	ENSEASG00005008677	TNPO3	100	86.132	Equus_asinus_asinus
ENSAMXG00000016236	tnpo3	100	86.132	ENSECAG00000012815	TNPO3	100	86.132	Equus_caballus
ENSAMXG00000016236	tnpo3	99	80.851	ENSEEUG00000005178	TNPO3	98	80.851	Erinaceus_europaeus
ENSAMXG00000016236	tnpo3	60	30.806	ENSEEUG00000011681	IPO13	72	30.806	Erinaceus_europaeus
ENSAMXG00000016236	tnpo3	99	94.342	ENSELUG00000012153	tnpo3	99	94.342	Esox_lucius
ENSAMXG00000016236	tnpo3	100	86.241	ENSFCAG00000018186	TNPO3	100	86.241	Felis_catus
ENSAMXG00000016236	tnpo3	96	80.936	ENSFALG00000010667	TNPO3	100	80.936	Ficedula_albicollis
ENSAMXG00000016236	tnpo3	100	85.838	ENSFDAG00000019578	TNPO3	100	85.838	Fukomys_damarensis
ENSAMXG00000016236	tnpo3	99	91.739	ENSFHEG00000012859	tnpo3	99	91.739	Fundulus_heteroclitus
ENSAMXG00000016236	tnpo3	100	93.066	ENSGMOG00000007324	tnpo3	100	93.066	Gadus_morhua
ENSAMXG00000016236	tnpo3	61	84.629	ENSGALG00000039420	TNPO3	99	84.629	Gallus_gallus
ENSAMXG00000016236	tnpo3	100	92.091	ENSGACG00000000699	tnpo3	100	92.091	Gasterosteus_aculeatus
ENSAMXG00000016236	tnpo3	93	85.064	ENSGAGG00000006777	TNPO3	100	85.064	Gopherus_agassizii
ENSAMXG00000016236	tnpo3	100	86.241	ENSGGOG00000008339	TNPO3	100	86.241	Gorilla_gorilla
ENSAMXG00000016236	tnpo3	100	92.741	ENSHBUG00000008351	tnpo3	100	92.741	Haplochromis_burtoni
ENSAMXG00000016236	tnpo3	100	86.349	ENSHGLG00000004463	TNPO3	100	86.349	Heterocephalus_glaber_female
ENSAMXG00000016236	tnpo3	100	86.349	ENSHGLG00100005509	TNPO3	100	86.349	Heterocephalus_glaber_male
ENSAMXG00000016236	tnpo3	100	90.683	ENSHCOG00000007221	tnpo3	100	90.683	Hippocampus_comes
ENSAMXG00000016236	tnpo3	100	94.583	ENSIPUG00000014979	TNPO3	99	94.583	Ictalurus_punctatus
ENSAMXG00000016236	tnpo3	100	86.132	ENSSTOG00000004885	TNPO3	100	86.132	Ictidomys_tridecemlineatus
ENSAMXG00000016236	tnpo3	100	80.454	ENSJJAG00000013530	Tnpo3	100	80.454	Jaculus_jaculus
ENSAMXG00000016236	tnpo3	100	91.766	ENSKMAG00000010497	tnpo3	100	91.766	Kryptolebias_marmoratus
ENSAMXG00000016236	tnpo3	96	87.542	ENSLBEG00000011988	-	99	87.542	Labrus_bergylta
ENSAMXG00000016236	tnpo3	96	90.034	ENSLBEG00000016595	tnpo3	100	90.034	Labrus_bergylta
ENSAMXG00000016236	tnpo3	84	88.055	ENSLACG00000002351	TNPO3	99	88.055	Latimeria_chalumnae
ENSAMXG00000016236	tnpo3	100	92.308	ENSLOCG00000015556	tnpo3	100	92.308	Lepisosteus_oculatus
ENSAMXG00000016236	tnpo3	100	85.545	ENSLAFG00000002738	TNPO3	100	85.545	Loxodonta_africana
ENSAMXG00000016236	tnpo3	100	86.241	ENSMFAG00000032385	TNPO3	100	86.241	Macaca_fascicularis
ENSAMXG00000016236	tnpo3	100	86.241	ENSMMUG00000004311	TNPO3	100	86.241	Macaca_mulatta
ENSAMXG00000016236	tnpo3	100	86.241	ENSMNEG00000045277	TNPO3	100	86.241	Macaca_nemestrina
ENSAMXG00000016236	tnpo3	100	86.241	ENSMLEG00000037881	TNPO3	100	86.241	Mandrillus_leucophaeus
ENSAMXG00000016236	tnpo3	100	92.849	ENSMAMG00000021096	tnpo3	100	92.849	Mastacembelus_armatus
ENSAMXG00000016236	tnpo3	100	92.741	ENSMZEG00005015084	tnpo3	100	92.741	Maylandia_zebra
ENSAMXG00000016236	tnpo3	78	81.103	ENSMGAG00000002839	TNPO3	99	81.103	Meleagris_gallopavo
ENSAMXG00000016236	tnpo3	100	85.915	ENSMAUG00000013463	Tnpo3	100	85.915	Mesocricetus_auratus
ENSAMXG00000016236	tnpo3	73	32.800	ENSMICG00000011003	IPO13	83	31.953	Microcebus_murinus
ENSAMXG00000016236	tnpo3	100	86.241	ENSMICG00000000140	TNPO3	100	86.241	Microcebus_murinus
ENSAMXG00000016236	tnpo3	100	86.024	ENSMOCG00000013264	Tnpo3	100	86.024	Microtus_ochrogaster
ENSAMXG00000016236	tnpo3	100	91.874	ENSMMOG00000005887	tnpo3	100	91.874	Mola_mola
ENSAMXG00000016236	tnpo3	100	86.132	ENSMODG00000014700	TNPO3	100	86.132	Monodelphis_domestica
ENSAMXG00000016236	tnpo3	100	91.983	ENSMALG00000006675	tnpo3	100	91.983	Monopterus_albus
ENSAMXG00000016236	tnpo3	100	85.915	MGP_CAROLIEiJ_G0028176	Tnpo3	100	85.915	Mus_caroli
ENSAMXG00000016236	tnpo3	100	85.915	ENSMUSG00000012535	Tnpo3	100	85.915	Mus_musculus
ENSAMXG00000016236	tnpo3	100	85.807	MGP_PahariEiJ_G0021934	Tnpo3	100	85.807	Mus_pahari
ENSAMXG00000016236	tnpo3	100	85.807	MGP_SPRETEiJ_G0029176	Tnpo3	100	85.807	Mus_spretus
ENSAMXG00000016236	tnpo3	100	86.241	ENSMPUG00000006021	TNPO3	100	86.241	Mustela_putorius_furo
ENSAMXG00000016236	tnpo3	100	77.573	ENSMLUG00000000947	TNPO3	100	77.573	Myotis_lucifugus
ENSAMXG00000016236	tnpo3	100	86.132	ENSNGAG00000008722	Tnpo3	100	86.132	Nannospalax_galili
ENSAMXG00000016236	tnpo3	100	91.116	ENSNBRG00000019001	tnpo3	100	92.672	Neolamprologus_brichardi
ENSAMXG00000016236	tnpo3	100	82.968	ENSNLEG00000012491	TNPO3	100	82.968	Nomascus_leucogenys
ENSAMXG00000016236	tnpo3	92	71.842	ENSMEUG00000002445	TNPO3	91	71.842	Notamacropus_eugenii
ENSAMXG00000016236	tnpo3	91	85.870	ENSOPRG00000006163	TNPO3	90	85.870	Ochotona_princeps
ENSAMXG00000016236	tnpo3	98	86.031	ENSODEG00000012826	TNPO3	100	86.031	Octodon_degus
ENSAMXG00000016236	tnpo3	100	92.849	ENSONIG00000007604	tnpo3	100	92.849	Oreochromis_niloticus
ENSAMXG00000016236	tnpo3	95	82.519	ENSOANG00000011451	TNPO3	100	82.519	Ornithorhynchus_anatinus
ENSAMXG00000016236	tnpo3	99	83.403	ENSOCUG00000010105	TNPO3	99	83.403	Oryctolagus_cuniculus
ENSAMXG00000016236	tnpo3	100	91.658	ENSORLG00000029369	tnpo3	100	91.658	Oryzias_latipes
ENSAMXG00000016236	tnpo3	100	91.658	ENSORLG00020003464	tnpo3	100	91.658	Oryzias_latipes_hni
ENSAMXG00000016236	tnpo3	100	91.766	ENSORLG00015002610	tnpo3	100	91.766	Oryzias_latipes_hsok
ENSAMXG00000016236	tnpo3	100	92.091	ENSOMEG00000021006	tnpo3	100	92.091	Oryzias_melastigma
ENSAMXG00000016236	tnpo3	100	86.132	ENSOGAG00000015340	TNPO3	100	86.132	Otolemur_garnettii
ENSAMXG00000016236	tnpo3	100	86.457	ENSOARG00000004026	TNPO3	100	86.457	Ovis_aries
ENSAMXG00000016236	tnpo3	100	86.241	ENSPPAG00000034975	TNPO3	100	86.241	Pan_paniscus
ENSAMXG00000016236	tnpo3	100	86.241	ENSPPRG00000002050	TNPO3	100	86.241	Panthera_pardus
ENSAMXG00000016236	tnpo3	100	86.241	ENSPTIG00000016167	TNPO3	100	86.241	Panthera_tigris_altaica
ENSAMXG00000016236	tnpo3	100	86.241	ENSPTRG00000019676	TNPO3	100	86.241	Pan_troglodytes
ENSAMXG00000016236	tnpo3	98	86.188	ENSPANG00000022226	TNPO3	99	86.188	Papio_anubis
ENSAMXG00000016236	tnpo3	100	85.097	ENSPKIG00000008628	-	100	85.097	Paramormyrops_kingsleyae
ENSAMXG00000016236	tnpo3	100	89.274	ENSPKIG00000023234	tnpo3	100	89.274	Paramormyrops_kingsleyae
ENSAMXG00000016236	tnpo3	62	85.915	ENSPMGG00000009763	tnpo3	99	85.915	Periophthalmus_magnuspinnatus
ENSAMXG00000016236	tnpo3	100	85.915	ENSPEMG00000000422	Tnpo3	100	85.915	Peromyscus_maniculatus_bairdii
ENSAMXG00000016236	tnpo3	95	72.480	ENSPMAG00000008621	tnpo3	100	72.480	Petromyzon_marinus
ENSAMXG00000016236	tnpo3	100	85.699	ENSPCIG00000011366	TNPO3	100	85.699	Phascolarctos_cinereus
ENSAMXG00000016236	tnpo3	100	92.091	ENSPFOG00000013592	tnpo3	99	92.091	Poecilia_formosa
ENSAMXG00000016236	tnpo3	100	92.091	ENSPLAG00000010188	tnpo3	100	92.091	Poecilia_latipinna
ENSAMXG00000016236	tnpo3	100	92.091	ENSPMEG00000022731	tnpo3	100	92.091	Poecilia_mexicana
ENSAMXG00000016236	tnpo3	100	86.241	ENSPPYG00000017990	TNPO3	100	86.241	Pongo_abelii
ENSAMXG00000016236	tnpo3	99	77.125	ENSPCAG00000010158	TNPO3	98	77.125	Procavia_capensis
ENSAMXG00000016236	tnpo3	87	86.513	ENSPCOG00000023901	TNPO3	96	86.513	Propithecus_coquereli
ENSAMXG00000016236	tnpo3	99	80.357	ENSPVAG00000015757	TNPO3	98	80.357	Pteropus_vampyrus
ENSAMXG00000016236	tnpo3	100	92.741	ENSPNYG00000002349	tnpo3	100	92.741	Pundamilia_nyererei
ENSAMXG00000016236	tnpo3	100	96.533	ENSPNAG00000001142	tnpo3	100	96.533	Pygocentrus_nattereri
ENSAMXG00000016236	tnpo3	100	85.807	ENSRNOG00000021758	Tnpo3	100	85.807	Rattus_norvegicus
ENSAMXG00000016236	tnpo3	100	86.132	ENSRBIG00000042549	TNPO3	100	86.132	Rhinopithecus_bieti
ENSAMXG00000016236	tnpo3	100	86.132	ENSRROG00000039264	TNPO3	100	86.132	Rhinopithecus_roxellana
ENSAMXG00000016236	tnpo3	100	69.906	ENSSBOG00000029642	TNPO3	100	69.906	Saimiri_boliviensis_boliviensis
ENSAMXG00000016236	tnpo3	96	86.183	ENSSHAG00000006837	TNPO3	100	86.183	Sarcophilus_harrisii
ENSAMXG00000016236	tnpo3	100	85.150	ENSSFOG00015004256	tnpo3	100	85.150	Scleropages_formosus
ENSAMXG00000016236	tnpo3	100	89.599	ENSSFOG00015001474	tnpo3	100	89.599	Scleropages_formosus
ENSAMXG00000016236	tnpo3	100	92.524	ENSSMAG00000010422	tnpo3	97	92.524	Scophthalmus_maximus
ENSAMXG00000016236	tnpo3	100	93.066	ENSSDUG00000004850	tnpo3	100	93.066	Seriola_dumerili
ENSAMXG00000016236	tnpo3	100	93.066	ENSSLDG00000016927	tnpo3	100	93.066	Seriola_lalandi_dorsalis
ENSAMXG00000016236	tnpo3	95	75.138	ENSSARG00000013893	TNPO3	98	75.138	Sorex_araneus
ENSAMXG00000016236	tnpo3	99	81.453	ENSSPUG00000007457	TNPO3	99	81.494	Sphenodon_punctatus
ENSAMXG00000016236	tnpo3	79	93.802	ENSSPAG00000014209	tnpo3	99	93.802	Stegastes_partitus
ENSAMXG00000016236	tnpo3	100	86.241	ENSSSCG00000016572	TNPO3	100	86.241	Sus_scrofa
ENSAMXG00000016236	tnpo3	100	91.577	ENSTNIG00000003347	tnpo3	100	91.577	Tetraodon_nigroviridis
ENSAMXG00000016236	tnpo3	88	85.761	ENSTBEG00000007220	TNPO3	90	85.761	Tupaia_belangeri
ENSAMXG00000016236	tnpo3	99	73.634	ENSTTRG00000014618	TNPO3	98	73.634	Tursiops_truncatus
ENSAMXG00000016236	tnpo3	100	86.241	ENSUAMG00000021281	TNPO3	100	86.241	Ursus_americanus
ENSAMXG00000016236	tnpo3	100	86.241	ENSUMAG00000006882	TNPO3	100	86.241	Ursus_maritimus
ENSAMXG00000016236	tnpo3	85	73.145	ENSVPAG00000006166	TNPO3	88	73.145	Vicugna_pacos
ENSAMXG00000016236	tnpo3	100	86.241	ENSVVUG00000011004	TNPO3	100	86.198	Vulpes_vulpes
ENSAMXG00000016236	tnpo3	99	78.007	ENSXETG00000015009	tnpo3	99	78.007	Xenopus_tropicalis
ENSAMXG00000016236	tnpo3	100	91.983	ENSXMAG00000013062	tnpo3	100	91.983	Xiphophorus_maculatus