EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000016238 (Gene tree)
Gene ID: 103041470
Gene Symbol: exosc8
Alias: Opa-interacting protein 2 (3' exoribonuclease family)|wu:fb79a10|zgc:110381
Full Name: exosome component 8
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5894 bases
Position: chr20:35270631-35276524
Accession: 103041470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000028912	RNase_PH	PF01138.21	8.1e-29	1	1
ENSAMXP00000016789	RNase_PH	PF01138.21	8.2e-29	1	1
ENSAMXP00000028912	RNase_PH_C	PF03725.15	3.5e-11	1	1
ENSAMXP00000016789	RNase_PH_C	PF03725.15	3.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045719	-	1519	-	ENSAMXP00000028912	276 (aa)	-	-
ENSAMXT00000016789	-	1244	XM_007229763	ENSAMXP00000016789	277 (aa)	XP_007229825	W5LAC7

Gene Model

Click here to download ENSAMXG00000016238's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000016238	exosc8	57	32.911	ENSAMXG00000035439	exosc7	53	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016238	exosc8	99	72.993	ENSG00000120699	EXOSC8	96	80.000	Homo_sapiens
ENSAMXG00000016238	exosc8	94	65.862	ENSAPOG00000002211	exosc8	95	65.862	Acanthochromis_polyacanthus
ENSAMXG00000016238	exosc8	99	73.455	ENSAMEG00000015762	EXOSC8	99	73.455	Ailuropoda_melanoleuca
ENSAMXG00000016238	exosc8	100	73.285	ENSACIG00000023510	exosc8	100	73.285	Amphilophus_citrinellus
ENSAMXG00000016238	exosc8	100	73.913	ENSAOCG00000015357	exosc8	100	72.202	Amphiprion_ocellaris
ENSAMXG00000016238	exosc8	100	69.314	ENSAPEG00000020401	exosc8	100	69.314	Amphiprion_percula
ENSAMXG00000016238	exosc8	92	30.566	ENSATEG00000008157	exosc7	86	30.566	Anabas_testudineus
ENSAMXG00000016238	exosc8	100	74.368	ENSATEG00000002924	exosc8	100	74.368	Anabas_testudineus
ENSAMXG00000016238	exosc8	53	30.380	ENSAPLG00000012218	EXOSC7	65	30.380	Anas_platyrhynchos
ENSAMXG00000016238	exosc8	99	72.000	ENSAPLG00000007895	EXOSC8	89	72.000	Anas_platyrhynchos
ENSAMXG00000016238	exosc8	99	68.864	ENSACAG00000017648	EXOSC8	98	68.864	Anolis_carolinensis
ENSAMXG00000016238	exosc8	99	72.993	ENSANAG00000028910	EXOSC8	99	72.993	Aotus_nancymaae
ENSAMXG00000016238	exosc8	100	75.090	ENSACLG00000002981	exosc8	100	75.090	Astatotilapia_calliptera
ENSAMXG00000016238	exosc8	99	72.628	ENSBTAG00000011855	EXOSC8	99	72.628	Bos_taurus
ENSAMXG00000016238	exosc8	99	73.358	ENSCJAG00000018078	EXOSC8	99	73.358	Callithrix_jacchus
ENSAMXG00000016238	exosc8	99	74.088	ENSCAFG00000006115	EXOSC8	99	74.088	Canis_familiaris
ENSAMXG00000016238	exosc8	98	73.704	ENSCAFG00020021481	EXOSC8	85	73.704	Canis_lupus_dingo
ENSAMXG00000016238	exosc8	98	71.111	ENSCHIG00000008153	EXOSC8	98	71.111	Capra_hircus
ENSAMXG00000016238	exosc8	99	73.358	ENSTSYG00000013226	EXOSC8	99	73.358	Carlito_syrichta
ENSAMXG00000016238	exosc8	99	72.628	ENSCPOG00000004450	EXOSC8	99	72.628	Cavia_porcellus
ENSAMXG00000016238	exosc8	99	73.358	ENSCCAG00000023491	EXOSC8	99	73.358	Cebus_capucinus
ENSAMXG00000016238	exosc8	99	73.358	ENSCATG00000040502	EXOSC8	99	73.358	Cercocebus_atys
ENSAMXG00000016238	exosc8	98	72.426	ENSCLAG00000003456	EXOSC8	99	72.426	Chinchilla_lanigera
ENSAMXG00000016238	exosc8	99	73.358	ENSCSAG00000017867	EXOSC8	99	73.358	Chlorocebus_sabaeus
ENSAMXG00000016238	exosc8	97	73.134	ENSCHOG00000009005	EXOSC8	99	73.134	Choloepus_hoffmanni
ENSAMXG00000016238	exosc8	99	74.453	ENSCPBG00000003168	EXOSC8	99	74.453	Chrysemys_picta_bellii
ENSAMXG00000016238	exosc8	99	49.638	ENSCING00000004231	-	96	50.929	Ciona_intestinalis
ENSAMXG00000016238	exosc8	96	47.348	ENSCSAVG00000002321	-	98	47.191	Ciona_savignyi
ENSAMXG00000016238	exosc8	99	73.358	ENSCANG00000040247	EXOSC8	99	73.358	Colobus_angolensis_palliatus
ENSAMXG00000016238	exosc8	99	71.533	ENSCGRG00001012262	Exosc8	99	71.533	Cricetulus_griseus_chok1gshd
ENSAMXG00000016238	exosc8	97	70.896	ENSCGRG00000003184	Exosc8	99	70.896	Cricetulus_griseus_crigri
ENSAMXG00000016238	exosc8	100	70.036	ENSCSEG00000019201	exosc8	100	70.036	Cynoglossus_semilaevis
ENSAMXG00000016238	exosc8	95	74.330	ENSCVAG00000010277	exosc8	96	72.996	Cyprinodon_variegatus
ENSAMXG00000016238	exosc8	100	79.783	ENSDARG00000068755	exosc8	100	79.783	Danio_rerio
ENSAMXG00000016238	exosc8	99	72.993	ENSDNOG00000019133	EXOSC8	91	72.993	Dasypus_novemcinctus
ENSAMXG00000016238	exosc8	99	73.358	ENSDORG00000011062	Exosc8	99	73.358	Dipodomys_ordii
ENSAMXG00000016238	exosc8	99	49.635	ENSETEG00000003498	EXOSC8	99	49.635	Echinops_telfairi
ENSAMXG00000016238	exosc8	71	60.101	ENSEBUG00000008140	exosc8	95	60.101	Eptatretus_burgeri
ENSAMXG00000016238	exosc8	99	72.894	ENSEASG00005019832	EXOSC8	99	72.894	Equus_asinus_asinus
ENSAMXG00000016238	exosc8	99	73.358	ENSECAG00000012606	EXOSC8	99	73.358	Equus_caballus
ENSAMXG00000016238	exosc8	97	63.806	ENSEEUG00000000433	EXOSC8	99	63.806	Erinaceus_europaeus
ENSAMXG00000016238	exosc8	99	74.453	ENSELUG00000008648	exosc8	99	74.453	Esox_lucius
ENSAMXG00000016238	exosc8	99	74.088	ENSFCAG00000003815	EXOSC8	99	74.088	Felis_catus
ENSAMXG00000016238	exosc8	96	71.429	ENSFALG00000008262	EXOSC8	83	71.429	Ficedula_albicollis
ENSAMXG00000016238	exosc8	92	30.038	ENSFALG00000002600	EXOSC7	86	30.038	Ficedula_albicollis
ENSAMXG00000016238	exosc8	99	72.993	ENSFDAG00000000161	EXOSC8	83	72.993	Fukomys_damarensis
ENSAMXG00000016238	exosc8	100	75.090	ENSFHEG00000001409	exosc8	100	75.090	Fundulus_heteroclitus
ENSAMXG00000016238	exosc8	100	72.202	ENSGMOG00000012314	exosc8	100	72.202	Gadus_morhua
ENSAMXG00000016238	exosc8	99	72.263	ENSGALG00000017048	EXOSC8	99	72.263	Gallus_gallus
ENSAMXG00000016238	exosc8	100	73.118	ENSGAFG00000020868	exosc8	100	73.118	Gambusia_affinis
ENSAMXG00000016238	exosc8	100	72.924	ENSGACG00000020564	exosc8	100	72.924	Gasterosteus_aculeatus
ENSAMXG00000016238	exosc8	57	31.646	ENSGACG00000003085	exosc7	54	31.646	Gasterosteus_aculeatus
ENSAMXG00000016238	exosc8	76	71.429	ENSGAGG00000006811	EXOSC8	96	71.429	Gopherus_agassizii
ENSAMXG00000016238	exosc8	99	72.993	ENSGGOG00000011902	EXOSC8	99	72.993	Gorilla_gorilla
ENSAMXG00000016238	exosc8	98	74.539	ENSHBUG00000006959	exosc8	99	74.539	Haplochromis_burtoni
ENSAMXG00000016238	exosc8	99	72.263	ENSHGLG00000002963	EXOSC8	99	72.263	Heterocephalus_glaber_female
ENSAMXG00000016238	exosc8	99	72.263	ENSHGLG00100011167	-	99	72.263	Heterocephalus_glaber_male
ENSAMXG00000016238	exosc8	95	30.112	ENSHCOG00000013001	exosc9	62	30.112	Hippocampus_comes
ENSAMXG00000016238	exosc8	98	68.382	ENSHCOG00000011740	exosc8	99	68.382	Hippocampus_comes
ENSAMXG00000016238	exosc8	100	87.004	ENSIPUG00000009497	exosc8	86	87.004	Ictalurus_punctatus
ENSAMXG00000016238	exosc8	100	48.014	ENSSTOG00000033940	-	97	48.014	Ictidomys_tridecemlineatus
ENSAMXG00000016238	exosc8	98	70.480	ENSJJAG00000022752	-	99	71.269	Jaculus_jaculus
ENSAMXG00000016238	exosc8	99	70.803	ENSJJAG00000010023	-	99	70.803	Jaculus_jaculus
ENSAMXG00000016238	exosc8	100	74.368	ENSKMAG00000005249	exosc8	100	74.368	Kryptolebias_marmoratus
ENSAMXG00000016238	exosc8	99	75.458	ENSLBEG00000020568	exosc8	95	72.996	Labrus_bergylta
ENSAMXG00000016238	exosc8	86	75.630	ENSLACG00000009536	EXOSC8	98	75.630	Latimeria_chalumnae
ENSAMXG00000016238	exosc8	99	74.638	ENSLOCG00000008503	exosc8	99	74.638	Lepisosteus_oculatus
ENSAMXG00000016238	exosc8	99	72.993	ENSLAFG00000014242	EXOSC8	99	72.993	Loxodonta_africana
ENSAMXG00000016238	exosc8	99	73.358	ENSMFAG00000027794	EXOSC8	99	73.358	Macaca_fascicularis
ENSAMXG00000016238	exosc8	99	73.358	ENSMMUG00000003588	EXOSC8	96	80.000	Macaca_mulatta
ENSAMXG00000016238	exosc8	99	73.358	ENSMNEG00000032970	EXOSC8	99	73.358	Macaca_nemestrina
ENSAMXG00000016238	exosc8	99	69.485	ENSMLEG00000040861	EXOSC8	98	69.485	Mandrillus_leucophaeus
ENSAMXG00000016238	exosc8	100	74.007	ENSMAMG00000014077	exosc8	100	74.007	Mastacembelus_armatus
ENSAMXG00000016238	exosc8	100	75.090	ENSMZEG00005024472	exosc8	100	75.090	Maylandia_zebra
ENSAMXG00000016238	exosc8	99	71.533	ENSMGAG00000015057	EXOSC8	99	71.533	Meleagris_gallopavo
ENSAMXG00000016238	exosc8	84	68.670	ENSMAUG00000017812	Exosc8	96	68.670	Mesocricetus_auratus
ENSAMXG00000016238	exosc8	99	72.993	ENSMICG00000003353	EXOSC8	99	72.993	Microcebus_murinus
ENSAMXG00000016238	exosc8	85	68.936	ENSMOCG00000017293	Exosc8	94	68.936	Microtus_ochrogaster
ENSAMXG00000016238	exosc8	81	71.300	ENSMMOG00000010530	exosc8	100	71.300	Mola_mola
ENSAMXG00000016238	exosc8	99	71.533	ENSMODG00000010052	EXOSC8	99	71.533	Monodelphis_domestica
ENSAMXG00000016238	exosc8	95	72.797	ENSMALG00000010744	exosc8	99	72.587	Monopterus_albus
ENSAMXG00000016238	exosc8	99	71.898	MGP_CAROLIEiJ_G0024992	Exosc8	100	80.769	Mus_caroli
ENSAMXG00000016238	exosc8	99	71.533	ENSMUSG00000027752	Exosc8	100	80.000	Mus_musculus
ENSAMXG00000016238	exosc8	99	72.263	MGP_PahariEiJ_G0026433	Exosc8	100	81.538	Mus_pahari
ENSAMXG00000016238	exosc8	99	72.263	MGP_SPRETEiJ_G0025927	Exosc8	100	80.769	Mus_spretus
ENSAMXG00000016238	exosc8	99	74.088	ENSMPUG00000001833	EXOSC8	99	74.088	Mustela_putorius_furo
ENSAMXG00000016238	exosc8	98	70.330	ENSNGAG00000020518	Exosc8	99	71.053	Nannospalax_galili
ENSAMXG00000016238	exosc8	100	66.551	ENSNBRG00000012967	exosc8	100	66.551	Neolamprologus_brichardi
ENSAMXG00000016238	exosc8	99	73.723	ENSNLEG00000001745	EXOSC8	99	73.723	Nomascus_leucogenys
ENSAMXG00000016238	exosc8	99	67.518	ENSMEUG00000008050	EXOSC8	99	67.518	Notamacropus_eugenii
ENSAMXG00000016238	exosc8	99	69.708	ENSOPRG00000004966	EXOSC8	99	69.708	Ochotona_princeps
ENSAMXG00000016238	exosc8	99	65.328	ENSODEG00000014890	-	99	65.328	Octodon_degus
ENSAMXG00000016238	exosc8	99	71.898	ENSODEG00000009230	-	99	71.898	Octodon_degus
ENSAMXG00000016238	exosc8	99	64.855	ENSODEG00000017401	-	99	64.855	Octodon_degus
ENSAMXG00000016238	exosc8	96	68.421	ENSODEG00000003316	-	97	68.421	Octodon_degus
ENSAMXG00000016238	exosc8	100	73.646	ENSONIG00000012607	exosc8	100	73.646	Oreochromis_niloticus
ENSAMXG00000016238	exosc8	99	70.290	ENSOANG00000015500	EXOSC8	90	70.290	Ornithorhynchus_anatinus
ENSAMXG00000016238	exosc8	99	73.723	ENSOCUG00000007465	EXOSC8	99	73.723	Oryctolagus_cuniculus
ENSAMXG00000016238	exosc8	100	73.646	ENSORLG00000004025	exosc8	100	73.646	Oryzias_latipes
ENSAMXG00000016238	exosc8	100	73.646	ENSORLG00020013129	exosc8	100	73.646	Oryzias_latipes_hni
ENSAMXG00000016238	exosc8	100	73.285	ENSORLG00015019052	exosc8	100	73.285	Oryzias_latipes_hsok
ENSAMXG00000016238	exosc8	92	30.534	ENSOMEG00000007979	exosc7	86	30.534	Oryzias_melastigma
ENSAMXG00000016238	exosc8	100	73.285	ENSOMEG00000013266	exosc8	100	73.285	Oryzias_melastigma
ENSAMXG00000016238	exosc8	99	71.533	ENSOGAG00000002745	EXOSC8	99	71.533	Otolemur_garnettii
ENSAMXG00000016238	exosc8	99	71.898	ENSOARG00000010229	EXOSC8	99	71.898	Ovis_aries
ENSAMXG00000016238	exosc8	99	73.358	ENSPPAG00000027267	EXOSC8	99	73.358	Pan_paniscus
ENSAMXG00000016238	exosc8	99	74.088	ENSPPRG00000022901	-	99	74.088	Panthera_pardus
ENSAMXG00000016238	exosc8	99	56.044	ENSPPRG00000022630	-	98	56.554	Panthera_pardus
ENSAMXG00000016238	exosc8	99	73.529	ENSPTIG00000001519	EXOSC8	99	72.628	Panthera_tigris_altaica
ENSAMXG00000016238	exosc8	99	73.358	ENSPTRG00000005790	EXOSC8	99	73.358	Pan_troglodytes
ENSAMXG00000016238	exosc8	99	73.358	ENSPANG00000019344	EXOSC8	99	73.358	Papio_anubis
ENSAMXG00000016238	exosc8	86	73.529	ENSPKIG00000023257	exosc8	97	73.529	Paramormyrops_kingsleyae
ENSAMXG00000016238	exosc8	99	74.088	ENSPSIG00000002406	EXOSC8	100	74.088	Pelodiscus_sinensis
ENSAMXG00000016238	exosc8	75	30.476	ENSPMGG00000019387	exosc9	90	30.476	Periophthalmus_magnuspinnatus
ENSAMXG00000016238	exosc8	99	74.453	ENSPMGG00000018185	exosc8	99	74.453	Periophthalmus_magnuspinnatus
ENSAMXG00000016238	exosc8	99	72.263	ENSPEMG00000010801	Exosc8	99	72.263	Peromyscus_maniculatus_bairdii
ENSAMXG00000016238	exosc8	98	69.853	ENSPMAG00000004395	exosc8	98	69.853	Petromyzon_marinus
ENSAMXG00000016238	exosc8	99	70.803	ENSPCIG00000021634	EXOSC8	99	70.803	Phascolarctos_cinereus
ENSAMXG00000016238	exosc8	99	73.626	ENSPLAG00000020762	exosc8	97	74.444	Poecilia_latipinna
ENSAMXG00000016238	exosc8	100	75.090	ENSPMEG00000000980	exosc8	100	75.090	Poecilia_mexicana
ENSAMXG00000016238	exosc8	69	69.110	ENSPMEG00000023498	-	85	69.110	Poecilia_mexicana
ENSAMXG00000016238	exosc8	100	72.401	ENSPREG00000011598	exosc8	100	72.401	Poecilia_reticulata
ENSAMXG00000016238	exosc8	99	72.263	ENSPPYG00000005287	EXOSC8	99	72.263	Pongo_abelii
ENSAMXG00000016238	exosc8	85	55.128	ENSPCAG00000014966	EXOSC8	85	55.128	Procavia_capensis
ENSAMXG00000016238	exosc8	99	73.358	ENSPCOG00000018867	EXOSC8	99	73.358	Propithecus_coquereli
ENSAMXG00000016238	exosc8	98	74.265	ENSPVAG00000014610	EXOSC8	99	74.265	Pteropus_vampyrus
ENSAMXG00000016238	exosc8	95	66.090	ENSPNYG00000013016	exosc8	97	66.090	Pundamilia_nyererei
ENSAMXG00000016238	exosc8	100	90.253	ENSPNAG00000020509	exosc8	100	90.253	Pygocentrus_nattereri
ENSAMXG00000016238	exosc8	85	69.362	ENSRNOG00000051623	Exosc8	97	69.362	Rattus_norvegicus
ENSAMXG00000016238	exosc8	99	72.993	ENSRBIG00000027590	EXOSC8	99	72.993	Rhinopithecus_bieti
ENSAMXG00000016238	exosc8	99	72.993	ENSRROG00000022383	-	99	72.993	Rhinopithecus_roxellana
ENSAMXG00000016238	exosc8	99	69.343	ENSRROG00000026332	-	99	69.343	Rhinopithecus_roxellana
ENSAMXG00000016238	exosc8	99	72.993	ENSSBOG00000004631	EXOSC8	99	72.993	Saimiri_boliviensis_boliviensis
ENSAMXG00000016238	exosc8	99	72.263	ENSSHAG00000005532	EXOSC8	99	72.263	Sarcophilus_harrisii
ENSAMXG00000016238	exosc8	100	79.422	ENSSFOG00015005651	exosc8	100	79.422	Scleropages_formosus
ENSAMXG00000016238	exosc8	100	72.202	ENSSMAG00000018819	exosc8	100	72.202	Scophthalmus_maximus
ENSAMXG00000016238	exosc8	100	74.368	ENSSDUG00000014161	exosc8	100	74.368	Seriola_dumerili
ENSAMXG00000016238	exosc8	57	33.974	ENSSLDG00000024102	exosc7	51	33.974	Seriola_lalandi_dorsalis
ENSAMXG00000016238	exosc8	99	74.265	ENSSLDG00000023126	exosc8	96	74.265	Seriola_lalandi_dorsalis
ENSAMXG00000016238	exosc8	99	67.518	ENSSARG00000013914	EXOSC8	99	67.518	Sorex_araneus
ENSAMXG00000016238	exosc8	93	72.266	ENSSPUG00000016825	EXOSC8	99	72.266	Sphenodon_punctatus
ENSAMXG00000016238	exosc8	100	75.090	ENSSPAG00000003434	exosc8	100	75.090	Stegastes_partitus
ENSAMXG00000016238	exosc8	98	70.849	ENSSSCG00000009358	EXOSC8	85	71.111	Sus_scrofa
ENSAMXG00000016238	exosc8	96	71.269	ENSTGUG00000011908	EXOSC8	99	71.269	Taeniopygia_guttata
ENSAMXG00000016238	exosc8	92	30.038	ENSTGUG00000004961	EXOSC7	87	30.038	Taeniopygia_guttata
ENSAMXG00000016238	exosc8	99	70.290	ENSTRUG00000001657	exosc8	100	70.290	Takifugu_rubripes
ENSAMXG00000016238	exosc8	100	72.563	ENSTNIG00000009927	exosc8	100	72.563	Tetraodon_nigroviridis
ENSAMXG00000016238	exosc8	92	30.189	ENSTNIG00000003617	exosc7	86	30.189	Tetraodon_nigroviridis
ENSAMXG00000016238	exosc8	99	72.263	ENSTBEG00000012040	EXOSC8	99	72.263	Tupaia_belangeri
ENSAMXG00000016238	exosc8	96	48.120	ENSTBEG00000000079	-	99	48.120	Tupaia_belangeri
ENSAMXG00000016238	exosc8	98	67.528	ENSTTRG00000007906	EXOSC8	100	67.528	Tursiops_truncatus
ENSAMXG00000016238	exosc8	97	73.234	ENSUAMG00000000695	EXOSC8	92	73.234	Ursus_americanus
ENSAMXG00000016238	exosc8	99	73.455	ENSUMAG00000024024	EXOSC8	99	73.455	Ursus_maritimus
ENSAMXG00000016238	exosc8	99	67.153	ENSVPAG00000007287	EXOSC8	99	67.153	Vicugna_pacos
ENSAMXG00000016238	exosc8	99	74.453	ENSVVUG00000026660	EXOSC8	97	73.978	Vulpes_vulpes
ENSAMXG00000016238	exosc8	94	30.112	ENSXETG00000020144	exosc7	88	30.112	Xenopus_tropicalis
ENSAMXG00000016238	exosc8	99	67.636	ENSXETG00000001819	exosc8	99	67.636	Xenopus_tropicalis
ENSAMXG00000016238	exosc8	99	73.260	ENSXCOG00000010128	exosc8	99	73.022	Xiphophorus_couchianus
ENSAMXG00000016238	exosc8	100	76.895	ENSXMAG00000008621	exosc8	100	76.895	Xiphophorus_maculatus