EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016319 (Gene tree)
Gene ID: 103038826
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 23187 bases
Position: chr11:11517130-11540316
Accession: 103038826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016806	cwf18	PF08315.12	2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016806	-	940	XM_022674349	ENSAMXP00000016806	163 (aa)	XP_022530070	W5LAE4

Gene Model

Click here to download ENSAMXG00000016319's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016319's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016319	ccdc12	98	69.325	ENSG00000160799	CCDC12	95	69.325	Homo_sapiens
ENSAMXG00000016319	ccdc12	100	83.436	ENSAPOG00000014426	ccdc12	60	83.436	Acanthochromis_polyacanthus
ENSAMXG00000016319	ccdc12	98	68.902	ENSAMEG00000012658	CCDC12	96	68.902	Ailuropoda_melanoleuca
ENSAMXG00000016319	ccdc12	69	89.286	ENSACIG00000015192	ccdc12	80	89.286	Amphilophus_citrinellus
ENSAMXG00000016319	ccdc12	75	85.246	ENSACIG00000022676	-	86	85.246	Amphilophus_citrinellus
ENSAMXG00000016319	ccdc12	99	82.716	ENSAOCG00000024127	ccdc12	97	82.716	Amphiprion_ocellaris
ENSAMXG00000016319	ccdc12	100	83.436	ENSAPEG00000009155	ccdc12	86	83.436	Amphiprion_percula
ENSAMXG00000016319	ccdc12	82	84.328	ENSATEG00000004807	ccdc12	100	84.328	Anabas_testudineus
ENSAMXG00000016319	ccdc12	82	71.111	ENSAPLG00000005482	CCDC12	99	71.111	Anas_platyrhynchos
ENSAMXG00000016319	ccdc12	100	69.461	ENSACAG00000004727	CCDC12	86	69.461	Anolis_carolinensis
ENSAMXG00000016319	ccdc12	82	70.896	ENSANAG00000024483	CCDC12	100	70.896	Aotus_nancymaae
ENSAMXG00000016319	ccdc12	100	80.982	ENSACLG00000005356	ccdc12	100	80.982	Astatotilapia_calliptera
ENSAMXG00000016319	ccdc12	95	69.677	ENSACLG00000012742	-	96	69.677	Astatotilapia_calliptera
ENSAMXG00000016319	ccdc12	89	71.622	ENSBTAG00000011311	CCDC12	96	68.675	Bos_taurus
ENSAMXG00000016319	ccdc12	83	38.849	WBGene00022092	Y69A2AR.21	86	37.821	Caenorhabditis_elegans
ENSAMXG00000016319	ccdc12	98	68.902	ENSCJAG00000002280	CCDC12	96	68.902	Callithrix_jacchus
ENSAMXG00000016319	ccdc12	98	68.902	ENSCAFG00000013588	CCDC12	96	68.902	Canis_familiaris
ENSAMXG00000016319	ccdc12	98	68.902	ENSCAFG00020014024	CCDC12	89	68.902	Canis_lupus_dingo
ENSAMXG00000016319	ccdc12	89	71.622	ENSCHIG00000014512	CCDC12	96	68.712	Capra_hircus
ENSAMXG00000016319	ccdc12	98	68.293	ENSTSYG00000032837	CCDC12	96	68.293	Carlito_syrichta
ENSAMXG00000016319	ccdc12	98	70.732	ENSCPOG00000032515	CCDC12	96	70.732	Cavia_porcellus
ENSAMXG00000016319	ccdc12	98	68.902	ENSCCAG00000020126	CCDC12	89	68.902	Cebus_capucinus
ENSAMXG00000016319	ccdc12	98	58.537	ENSCATG00000033681	CCDC12	89	58.537	Cercocebus_atys
ENSAMXG00000016319	ccdc12	98	70.732	ENSCLAG00000016013	CCDC12	96	70.732	Chinchilla_lanigera
ENSAMXG00000016319	ccdc12	98	68.293	ENSCSAG00000016154	CCDC12	89	68.323	Chlorocebus_sabaeus
ENSAMXG00000016319	ccdc12	98	71.429	ENSCPBG00000015804	CCDC12	77	71.429	Chrysemys_picta_bellii
ENSAMXG00000016319	ccdc12	93	51.974	ENSCING00000005261	-	88	51.974	Ciona_intestinalis
ENSAMXG00000016319	ccdc12	98	68.293	ENSCANG00000020857	CCDC12	89	68.323	Colobus_angolensis_palliatus
ENSAMXG00000016319	ccdc12	98	70.122	ENSCGRG00001000459	Ccdc12	96	70.122	Cricetulus_griseus_chok1gshd
ENSAMXG00000016319	ccdc12	98	70.122	ENSCGRG00000012816	Ccdc12	96	70.122	Cricetulus_griseus_crigri
ENSAMXG00000016319	ccdc12	100	81.595	ENSCSEG00000004543	ccdc12	100	81.595	Cynoglossus_semilaevis
ENSAMXG00000016319	ccdc12	82	85.185	ENSCVAG00000011342	ccdc12	100	85.185	Cyprinodon_variegatus
ENSAMXG00000016319	ccdc12	100	88.957	ENSDARG00000023003	ccdc12	100	88.957	Danio_rerio
ENSAMXG00000016319	ccdc12	85	70.000	ENSDORG00000016567	-	96	68.944	Dipodomys_ordii
ENSAMXG00000016319	ccdc12	98	61.491	ENSDORG00000024399	-	96	61.491	Dipodomys_ordii
ENSAMXG00000016319	ccdc12	98	43.750	FBgn0039732	CG15525	92	43.750	Drosophila_melanogaster
ENSAMXG00000016319	ccdc12	66	64.865	ENSETEG00000000030	CCDC12	95	64.865	Echinops_telfairi
ENSAMXG00000016319	ccdc12	100	55.828	ENSEBUG00000005674	ccdc12	100	58.537	Eptatretus_burgeri
ENSAMXG00000016319	ccdc12	98	69.565	ENSEASG00005008148	-	66	69.565	Equus_asinus_asinus
ENSAMXG00000016319	ccdc12	98	64.024	ENSECAG00000008649	CCDC12	96	64.024	Equus_caballus
ENSAMXG00000016319	ccdc12	100	84.242	ENSELUG00000024105	ccdc12	100	85.455	Esox_lucius
ENSAMXG00000016319	ccdc12	98	69.512	ENSFCAG00000015474	CCDC12	96	69.512	Felis_catus
ENSAMXG00000016319	ccdc12	96	62.893	ENSFALG00000001895	CCDC12	98	62.893	Ficedula_albicollis
ENSAMXG00000016319	ccdc12	98	70.122	ENSFDAG00000002549	CCDC12	97	70.122	Fukomys_damarensis
ENSAMXG00000016319	ccdc12	100	82.209	ENSFHEG00000016247	ccdc12	93	82.209	Fundulus_heteroclitus
ENSAMXG00000016319	ccdc12	100	73.006	ENSGMOG00000016901	ccdc12	100	73.006	Gadus_morhua
ENSAMXG00000016319	ccdc12	100	81.595	ENSGAFG00000006762	ccdc12	100	81.595	Gambusia_affinis
ENSAMXG00000016319	ccdc12	100	80.368	ENSGACG00000008629	ccdc12	100	80.368	Gasterosteus_aculeatus
ENSAMXG00000016319	ccdc12	98	71.429	ENSGAGG00000019688	CCDC12	95	71.429	Gopherus_agassizii
ENSAMXG00000016319	ccdc12	98	69.325	ENSGGOG00000009012	CCDC12	88	69.375	Gorilla_gorilla
ENSAMXG00000016319	ccdc12	100	80.982	ENSHBUG00000016447	ccdc12	100	80.982	Haplochromis_burtoni
ENSAMXG00000016319	ccdc12	98	71.166	ENSHGLG00000014058	CCDC12	96	70.732	Heterocephalus_glaber_female
ENSAMXG00000016319	ccdc12	98	71.166	ENSHGLG00100005918	CCDC12	96	70.732	Heterocephalus_glaber_male
ENSAMXG00000016319	ccdc12	100	78.049	ENSHCOG00000015164	ccdc12	100	78.049	Hippocampus_comes
ENSAMXG00000016319	ccdc12	99	84.568	ENSIPUG00000001310	Ccdc12	99	84.568	Ictalurus_punctatus
ENSAMXG00000016319	ccdc12	98	70.732	ENSSTOG00000003085	CCDC12	96	70.732	Ictidomys_tridecemlineatus
ENSAMXG00000016319	ccdc12	98	68.293	ENSJJAG00000014918	Ccdc12	96	68.293	Jaculus_jaculus
ENSAMXG00000016319	ccdc12	100	79.394	ENSKMAG00000013891	ccdc12	100	79.394	Kryptolebias_marmoratus
ENSAMXG00000016319	ccdc12	99	84.568	ENSLBEG00000024714	ccdc12	86	84.568	Labrus_bergylta
ENSAMXG00000016319	ccdc12	100	80.982	ENSLOCG00000005683	ccdc12	92	81.595	Lepisosteus_oculatus
ENSAMXG00000016319	ccdc12	68	78.571	ENSLAFG00000022573	-	98	78.571	Loxodonta_africana
ENSAMXG00000016319	ccdc12	98	66.875	ENSLAFG00000027745	-	98	66.460	Loxodonta_africana
ENSAMXG00000016319	ccdc12	98	68.293	ENSMFAG00000002976	CCDC12	89	68.323	Macaca_fascicularis
ENSAMXG00000016319	ccdc12	98	68.293	ENSMMUG00000019810	CCDC12	89	68.323	Macaca_mulatta
ENSAMXG00000016319	ccdc12	98	68.293	ENSMNEG00000035785	CCDC12	89	68.323	Macaca_nemestrina
ENSAMXG00000016319	ccdc12	98	68.293	ENSMLEG00000038060	CCDC12	89	68.323	Mandrillus_leucophaeus
ENSAMXG00000016319	ccdc12	100	83.436	ENSMAMG00000012165	ccdc12	100	83.436	Mastacembelus_armatus
ENSAMXG00000016319	ccdc12	95	70.323	ENSMZEG00005019013	-	96	70.323	Maylandia_zebra
ENSAMXG00000016319	ccdc12	100	81.595	ENSMZEG00005014728	ccdc12	100	81.595	Maylandia_zebra
ENSAMXG00000016319	ccdc12	85	71.429	ENSMGAG00000002815	CCDC12	92	68.712	Meleagris_gallopavo
ENSAMXG00000016319	ccdc12	98	69.512	ENSMAUG00000008879	Ccdc12	96	69.512	Mesocricetus_auratus
ENSAMXG00000016319	ccdc12	98	68.485	ENSMICG00000032886	CCDC12	96	69.091	Microcebus_murinus
ENSAMXG00000016319	ccdc12	98	70.122	ENSMOCG00000004483	Ccdc12	96	70.122	Microtus_ochrogaster
ENSAMXG00000016319	ccdc12	68	85.586	ENSMMOG00000001860	ccdc12	77	85.586	Mola_mola
ENSAMXG00000016319	ccdc12	98	61.875	ENSMODG00000025021	-	96	61.875	Monodelphis_domestica
ENSAMXG00000016319	ccdc12	98	68.485	ENSMODG00000013967	-	96	69.136	Monodelphis_domestica
ENSAMXG00000016319	ccdc12	98	60.625	ENSMODG00000022615	-	96	60.625	Monodelphis_domestica
ENSAMXG00000016319	ccdc12	100	83.436	ENSMALG00000011850	ccdc12	100	83.436	Monopterus_albus
ENSAMXG00000016319	ccdc12	98	70.122	MGP_CAROLIEiJ_G0032737	-	96	70.122	Mus_caroli
ENSAMXG00000016319	ccdc12	98	70.122	ENSMUSG00000019659	Ccdc12	96	70.122	Mus_musculus
ENSAMXG00000016319	ccdc12	98	70.122	MGP_PahariEiJ_G0015604	Ccdc12	96	70.122	Mus_pahari
ENSAMXG00000016319	ccdc12	98	70.122	MGP_SPRETEiJ_G0033885	Ccdc12	96	70.122	Mus_spretus
ENSAMXG00000016319	ccdc12	98	66.871	ENSMLUG00000009547	CCDC12	96	66.871	Myotis_lucifugus
ENSAMXG00000016319	ccdc12	98	68.902	ENSNGAG00000004149	Ccdc12	96	68.902	Nannospalax_galili
ENSAMXG00000016319	ccdc12	100	76.074	ENSNBRG00000015275	ccdc12	100	76.074	Neolamprologus_brichardi
ENSAMXG00000016319	ccdc12	98	68.902	ENSNLEG00000006219	CCDC12	96	68.902	Nomascus_leucogenys
ENSAMXG00000016319	ccdc12	93	66.452	ENSOPRG00000005086	CCDC12	92	66.667	Ochotona_princeps
ENSAMXG00000016319	ccdc12	98	70.732	ENSODEG00000012202	CCDC12	96	70.732	Octodon_degus
ENSAMXG00000016319	ccdc12	100	81.595	ENSONIG00000003061	ccdc12	100	81.595	Oreochromis_niloticus
ENSAMXG00000016319	ccdc12	80	71.756	ENSOANG00000004263	-	98	71.756	Ornithorhynchus_anatinus
ENSAMXG00000016319	ccdc12	98	68.293	ENSOCUG00000012431	CCDC12	82	68.293	Oryctolagus_cuniculus
ENSAMXG00000016319	ccdc12	100	78.788	ENSORLG00000008126	ccdc12	100	78.788	Oryzias_latipes
ENSAMXG00000016319	ccdc12	100	80.982	ENSORLG00020013927	ccdc12	100	80.982	Oryzias_latipes_hni
ENSAMXG00000016319	ccdc12	100	80.982	ENSORLG00015020115	ccdc12	100	80.982	Oryzias_latipes_hsok
ENSAMXG00000016319	ccdc12	100	82.822	ENSOMEG00000014082	ccdc12	100	82.822	Oryzias_melastigma
ENSAMXG00000016319	ccdc12	100	82.822	ENSOMEG00000022304	ccdc12	100	82.822	Oryzias_melastigma
ENSAMXG00000016319	ccdc12	68	76.786	ENSOGAG00000016807	CCDC12	100	76.786	Otolemur_garnettii
ENSAMXG00000016319	ccdc12	73	73.950	ENSOARG00000006426	CCDC12	100	70.073	Ovis_aries
ENSAMXG00000016319	ccdc12	98	68.750	ENSPPAG00000028782	CCDC12	88	68.750	Pan_paniscus
ENSAMXG00000016319	ccdc12	98	69.512	ENSPPRG00000013547	CCDC12	96	69.512	Panthera_pardus
ENSAMXG00000016319	ccdc12	98	69.565	ENSPTIG00000014875	CCDC12	92	69.565	Panthera_tigris_altaica
ENSAMXG00000016319	ccdc12	98	69.325	ENSPTRG00000014862	CCDC12	88	69.375	Pan_troglodytes
ENSAMXG00000016319	ccdc12	98	68.293	ENSPANG00000017485	CCDC12	91	68.323	Papio_anubis
ENSAMXG00000016319	ccdc12	100	81.098	ENSPKIG00000019130	ccdc12	100	83.537	Paramormyrops_kingsleyae
ENSAMXG00000016319	ccdc12	68	82.883	ENSPSIG00000010867	CCDC12	100	82.883	Pelodiscus_sinensis
ENSAMXG00000016319	ccdc12	100	80.982	ENSPMGG00000012211	ccdc12	100	80.982	Periophthalmus_magnuspinnatus
ENSAMXG00000016319	ccdc12	98	70.122	ENSPEMG00000022196	-	96	70.122	Peromyscus_maniculatus_bairdii
ENSAMXG00000016319	ccdc12	99	55.828	ENSPEMG00000001376	-	97	55.828	Peromyscus_maniculatus_bairdii
ENSAMXG00000016319	ccdc12	96	70.701	ENSPMAG00000000005	ccdc12	92	70.701	Petromyzon_marinus
ENSAMXG00000016319	ccdc12	98	70.552	ENSPCIG00000025941	CCDC12	96	70.625	Phascolarctos_cinereus
ENSAMXG00000016319	ccdc12	100	82.209	ENSPFOG00000000343	ccdc12	100	82.209	Poecilia_formosa
ENSAMXG00000016319	ccdc12	100	82.209	ENSPLAG00000019010	ccdc12	100	82.209	Poecilia_latipinna
ENSAMXG00000016319	ccdc12	88	82.639	ENSPMEG00000022371	ccdc12	81	82.209	Poecilia_mexicana
ENSAMXG00000016319	ccdc12	100	82.822	ENSPREG00000020932	ccdc12	81	82.822	Poecilia_reticulata
ENSAMXG00000016319	ccdc12	98	68.902	ENSPPYG00000013924	CCDC12	79	68.902	Pongo_abelii
ENSAMXG00000016319	ccdc12	98	69.753	ENSPCAG00000005800	CCDC12	96	69.753	Procavia_capensis
ENSAMXG00000016319	ccdc12	98	68.485	ENSPCOG00000018682	CCDC12	89	69.091	Propithecus_coquereli
ENSAMXG00000016319	ccdc12	98	70.122	ENSPVAG00000004204	CCDC12	96	70.122	Pteropus_vampyrus
ENSAMXG00000016319	ccdc12	100	81.595	ENSPNYG00000016295	ccdc12	100	81.595	Pundamilia_nyererei
ENSAMXG00000016319	ccdc12	100	73.171	ENSPNAG00000028558	ccdc12	90	98.214	Pygocentrus_nattereri
ENSAMXG00000016319	ccdc12	98	70.122	ENSRNOG00000020946	Ccdc12	96	70.122	Rattus_norvegicus
ENSAMXG00000016319	ccdc12	98	68.293	ENSRBIG00000039910	CCDC12	89	68.323	Rhinopithecus_bieti
ENSAMXG00000016319	ccdc12	98	68.293	ENSRROG00000039721	CCDC12	96	68.323	Rhinopithecus_roxellana
ENSAMXG00000016319	ccdc12	98	68.902	ENSSBOG00000035443	CCDC12	89	68.902	Saimiri_boliviensis_boliviensis
ENSAMXG00000016319	ccdc12	98	70.000	ENSSHAG00000003265	-	96	70.000	Sarcophilus_harrisii
ENSAMXG00000016319	ccdc12	100	80.488	ENSSFOG00015001307	ccdc12	100	80.488	Scleropages_formosus
ENSAMXG00000016319	ccdc12	91	82.432	ENSSMAG00000019856	ccdc12	100	81.707	Scophthalmus_maximus
ENSAMXG00000016319	ccdc12	100	80.982	ENSSDUG00000006549	ccdc12	100	80.982	Seriola_dumerili
ENSAMXG00000016319	ccdc12	100	84.049	ENSSLDG00000015956	ccdc12	100	84.049	Seriola_lalandi_dorsalis
ENSAMXG00000016319	ccdc12	90	51.020	ENSSPUG00000013054	CCDC12	91	51.020	Sphenodon_punctatus
ENSAMXG00000016319	ccdc12	100	84.049	ENSSPAG00000007010	ccdc12	100	84.049	Stegastes_partitus
ENSAMXG00000016319	ccdc12	62	53.465	ENSSSCG00000007882	-	69	53.465	Sus_scrofa
ENSAMXG00000016319	ccdc12	98	69.325	ENSSSCG00000011329	-	96	69.325	Sus_scrofa
ENSAMXG00000016319	ccdc12	67	66.364	ENSTGUG00000000186	CCDC12	86	66.364	Taeniopygia_guttata
ENSAMXG00000016319	ccdc12	100	73.620	ENSTRUG00000014023	ccdc12	85	73.620	Takifugu_rubripes
ENSAMXG00000016319	ccdc12	100	79.755	ENSTNIG00000018407	ccdc12	98	79.755	Tetraodon_nigroviridis
ENSAMXG00000016319	ccdc12	98	46.667	ENSTBEG00000000048	CCDC12	96	46.667	Tupaia_belangeri
ENSAMXG00000016319	ccdc12	98	65.217	ENSTTRG00000015854	CCDC12	96	66.061	Tursiops_truncatus
ENSAMXG00000016319	ccdc12	98	62.805	ENSUAMG00000025548	CCDC12	93	71.014	Ursus_americanus
ENSAMXG00000016319	ccdc12	98	68.902	ENSUMAG00000004346	CCDC12	96	68.902	Ursus_maritimus
ENSAMXG00000016319	ccdc12	66	56.757	ENSVPAG00000000070	-	95	56.757	Vicugna_pacos
ENSAMXG00000016319	ccdc12	98	68.902	ENSVVUG00000004582	CCDC12	96	68.902	Vulpes_vulpes
ENSAMXG00000016319	ccdc12	84	73.723	ENSXETG00000013123	ccdc12	100	73.723	Xenopus_tropicalis
ENSAMXG00000016319	ccdc12	100	82.209	ENSXCOG00000019741	ccdc12	100	82.209	Xiphophorus_couchianus
ENSAMXG00000016319	ccdc12	100	82.209	ENSXMAG00000014098	ccdc12	81	82.209	Xiphophorus_maculatus