EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016463 (Gene tree)
Gene ID: 103043197
Gene Symbol: rexo1
Alias: fb77b11|si:dkey-45m5.5|wu:fb77b11
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 19209 bases
Position: chr6:12938038-12957246
Accession: 103043197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000016956	RNase_T	PF00929.24	4.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000016956	-	6344	XM_007245786	ENSAMXP00000016956	1283 (aa)	XP_007245848	W5LAU4

Gene Model

Click here to download ENSAMXG00000016463's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016463's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016463	rexo1	100	55.279	ENSCSEG00000016683	rexo1	100	55.131	Cynoglossus_semilaevis
ENSAMXG00000016463	rexo1	100	59.259	ENSELUG00000014078	rexo1	100	58.112	Esox_lucius
ENSAMXG00000016463	rexo1	82	60.729	ENSGMOG00000011119	rexo1	88	61.290	Gadus_morhua
ENSAMXG00000016463	rexo1	100	54.497	ENSLOCG00000001203	rexo1	100	53.951	Lepisosteus_oculatus
ENSAMXG00000016463	rexo1	100	56.339	ENSMMOG00000006931	rexo1	100	54.628	Mola_mola
ENSAMXG00000016463	rexo1	100	77.269	ENSPNAG00000025432	rexo1	100	77.519	Pygocentrus_nattereri
ENSAMXG00000016463	rexo1	99	57.564	ENSSFOG00015001227	rexo1	99	56.798	Scleropages_formosus