EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016657 (Gene tree)
Gene ID: 103037618
Gene Symbol: parp4
Alias: si:dkey-174k18.1
Full Name: poly(ADP-ribose) polymerase family member 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 34101 bases
Position: chrAPWO02001502.1:33395-67495
Accession: 103037618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017153	PARP	PF00644.20	2.7e-29	1	1
ENSAMXP00000045749	PARP	PF00644.20	2.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017153	-	9444	-	ENSAMXP00000017153	1748 (aa)	-	W5LBE1
ENSAMXT00000034316	-	9444	XM_022662996	ENSAMXP00000045749	1748 (aa)	XP_022518717	UPI000BBDA783

Gene Model

Click here to download ENSAMXG00000016657's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03410	Base excision repair	KEGG
amex04210	Apoptosis	KEGG
amex04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016657	parp4	78	47.087	ENSG00000102699	PARP4	80	47.087	Homo_sapiens
ENSAMXG00000016657	parp4	71	61.290	ENSAPOG00000020678	parp4	95	61.811	Acanthochromis_polyacanthus
ENSAMXG00000016657	parp4	77	47.592	ENSAMEG00000017377	PARP4	99	47.862	Ailuropoda_melanoleuca
ENSAMXG00000016657	parp4	76	66.412	ENSACIG00000021890	parp4	99	66.412	Amphilophus_citrinellus
ENSAMXG00000016657	parp4	70	63.788	ENSATEG00000023758	parp4	82	64.532	Anabas_testudineus
ENSAMXG00000016657	parp4	69	49.674	ENSAPLG00000005053	PARP4	99	51.750	Anas_platyrhynchos
ENSAMXG00000016657	parp4	76	47.227	ENSACAG00000001725	PARP4	75	47.227	Anolis_carolinensis
ENSAMXG00000016657	parp4	93	42.675	ENSANAG00000021254	PARP4	81	46.955	Aotus_nancymaae
ENSAMXG00000016657	parp4	79	63.179	ENSACLG00000009783	parp4	76	62.168	Astatotilapia_calliptera
ENSAMXG00000016657	parp4	77	47.261	ENSBTAG00000025400	PARP4	74	47.261	Bos_taurus
ENSAMXG00000016657	parp4	78	46.898	ENSCJAG00000004452	PARP4	81	46.898	Callithrix_jacchus
ENSAMXG00000016657	parp4	76	46.521	ENSCAFG00000007375	PARP4	85	46.559	Canis_familiaris
ENSAMXG00000016657	parp4	76	46.464	ENSCAFG00020002104	PARP4	99	46.464	Canis_lupus_dingo
ENSAMXG00000016657	parp4	77	47.506	ENSCHIG00000016066	PARP4	78	47.506	Capra_hircus
ENSAMXG00000016657	parp4	76	46.982	ENSTSYG00000014701	PARP4	83	46.982	Carlito_syrichta
ENSAMXG00000016657	parp4	77	45.928	ENSCPOG00000014672	PARP4	80	45.928	Cavia_porcellus
ENSAMXG00000016657	parp4	79	46.737	ENSCCAG00000032863	PARP4	81	46.737	Cebus_capucinus
ENSAMXG00000016657	parp4	78	46.110	ENSCATG00000035770	PARP4	80	46.067	Cercocebus_atys
ENSAMXG00000016657	parp4	78	47.731	ENSCSAG00000018004	PARP4	80	47.731	Chlorocebus_sabaeus
ENSAMXG00000016657	parp4	51	52.083	ENSCHOG00000006882	-	74	52.083	Choloepus_hoffmanni
ENSAMXG00000016657	parp4	79	48.430	ENSCPBG00000020893	PARP4	81	48.430	Chrysemys_picta_bellii
ENSAMXG00000016657	parp4	77	45.565	ENSCANG00000014573	PARP4	79	45.477	Colobus_angolensis_palliatus
ENSAMXG00000016657	parp4	77	46.267	ENSCGRG00001021886	Parp4	78	46.432	Cricetulus_griseus_chok1gshd
ENSAMXG00000016657	parp4	77	46.267	ENSCGRG00000011944	Parp4	77	46.432	Cricetulus_griseus_crigri
ENSAMXG00000016657	parp4	78	59.494	ENSCSEG00000004631	parp4	86	59.494	Cynoglossus_semilaevis
ENSAMXG00000016657	parp4	71	67.424	ENSCVAG00000010227	parp4	99	67.424	Cyprinodon_variegatus
ENSAMXG00000016657	parp4	80	69.176	ENSDARG00000069934	parp4	79	69.593	Danio_rerio
ENSAMXG00000016657	parp4	77	47.068	ENSDNOG00000037733	PARP4	70	47.231	Dasypus_novemcinctus
ENSAMXG00000016657	parp4	77	47.122	ENSDORG00000029090	Parp4	97	46.957	Dipodomys_ordii
ENSAMXG00000016657	parp4	77	47.170	ENSEASG00005000229	PARP4	96	50.570	Equus_asinus_asinus
ENSAMXG00000016657	parp4	77	47.141	ENSECAG00000009458	PARP4	80	47.141	Equus_caballus
ENSAMXG00000016657	parp4	86	66.532	ENSELUG00000005711	parp4	78	65.902	Esox_lucius
ENSAMXG00000016657	parp4	77	47.798	ENSFCAG00000031561	PARP4	81	47.805	Felis_catus
ENSAMXG00000016657	parp4	78	46.423	ENSFDAG00000010439	PARP4	81	46.423	Fukomys_damarensis
ENSAMXG00000016657	parp4	70	63.043	ENSFHEG00000021894	parp4	96	63.043	Fundulus_heteroclitus
ENSAMXG00000016657	parp4	64	72.862	ENSGMOG00000001674	parp4	73	72.862	Gadus_morhua
ENSAMXG00000016657	parp4	77	47.990	ENSGALG00000034473	PARP4	86	47.990	Gallus_gallus
ENSAMXG00000016657	parp4	77	62.674	ENSGACG00000008521	parp4	80	62.745	Gasterosteus_aculeatus
ENSAMXG00000016657	parp4	76	48.716	ENSGAGG00000006063	PARP4	78	49.001	Gopherus_agassizii
ENSAMXG00000016657	parp4	74	45.830	ENSGGOG00000002940	PARP4	76	45.830	Gorilla_gorilla
ENSAMXG00000016657	parp4	62	68.087	ENSHBUG00000018539	parp4	98	69.538	Haplochromis_burtoni
ENSAMXG00000016657	parp4	78	46.431	ENSHGLG00000008309	PARP4	80	46.431	Heterocephalus_glaber_female
ENSAMXG00000016657	parp4	78	46.431	ENSHGLG00100012331	PARP4	80	46.431	Heterocephalus_glaber_male
ENSAMXG00000016657	parp4	79	57.639	ENSHCOG00000017842	parp4	80	57.639	Hippocampus_comes
ENSAMXG00000016657	parp4	80	79.268	ENSIPUG00000003181	parp4	77	79.268	Ictalurus_punctatus
ENSAMXG00000016657	parp4	62	52.621	ENSSTOG00000027869	PARP4	77	52.621	Ictidomys_tridecemlineatus
ENSAMXG00000016657	parp4	57	67.554	ENSKMAG00000018334	parp4	96	67.554	Kryptolebias_marmoratus
ENSAMXG00000016657	parp4	77	63.188	ENSLBEG00000013362	parp4	72	63.188	Labrus_bergylta
ENSAMXG00000016657	parp4	78	46.340	ENSLACG00000005075	-	79	46.340	Latimeria_chalumnae
ENSAMXG00000016657	parp4	77	57.143	ENSLOCG00000010789	parp4	80	57.143	Lepisosteus_oculatus
ENSAMXG00000016657	parp4	69	47.197	ENSLAFG00000002022	-	99	49.266	Loxodonta_africana
ENSAMXG00000016657	parp4	78	47.368	ENSMMUG00000012297	PARP4	80	47.368	Macaca_mulatta
ENSAMXG00000016657	parp4	69	48.454	ENSMNEG00000044999	PARP4	77	48.454	Macaca_nemestrina
ENSAMXG00000016657	parp4	78	47.654	ENSMLEG00000041053	PARP4	80	47.654	Mandrillus_leucophaeus
ENSAMXG00000016657	parp4	65	64.218	ENSMAMG00000020871	parp4	92	64.218	Mastacembelus_armatus
ENSAMXG00000016657	parp4	76	63.179	ENSMZEG00005014412	parp4	76	62.168	Maylandia_zebra
ENSAMXG00000016657	parp4	78	48.629	ENSMGAG00000015136	PARP4	89	47.218	Meleagris_gallopavo
ENSAMXG00000016657	parp4	69	47.283	ENSMICG00000028028	PARP4	80	47.454	Microcebus_murinus
ENSAMXG00000016657	parp4	76	46.749	ENSMOCG00000016582	Parp4	76	46.634	Microtus_ochrogaster
ENSAMXG00000016657	parp4	71	58.333	ENSMMOG00000019397	parp4	98	57.337	Mola_mola
ENSAMXG00000016657	parp4	80	47.925	ENSMODG00000007894	PARP4	73	47.925	Monodelphis_domestica
ENSAMXG00000016657	parp4	59	61.509	ENSMALG00000004027	parp4	99	60.951	Monopterus_albus
ENSAMXG00000016657	parp4	76	46.405	MGP_CAROLIEiJ_G0019339	-	69	45.900	Mus_caroli
ENSAMXG00000016657	parp4	76	46.148	ENSMUSG00000054509	Parp4	69	46.229	Mus_musculus
ENSAMXG00000016657	parp4	77	46.198	MGP_PahariEiJ_G0030357	Parp4	70	46.036	Mus_pahari
ENSAMXG00000016657	parp4	76	45.820	MGP_SPRETEiJ_G0020230	Parp4	69	46.154	Mus_spretus
ENSAMXG00000016657	parp4	68	49.209	ENSMPUG00000013318	PARP4	77	49.209	Mustela_putorius_furo
ENSAMXG00000016657	parp4	77	47.188	ENSMLUG00000003797	PARP4	79	47.351	Myotis_lucifugus
ENSAMXG00000016657	parp4	90	42.126	ENSNGAG00000018396	Parp4	89	42.374	Nannospalax_galili
ENSAMXG00000016657	parp4	53	71.186	ENSMEUG00000015644	-	78	71.186	Notamacropus_eugenii
ENSAMXG00000016657	parp4	99	52.042	ENSONIG00000010261	parp4	78	64.336	Oreochromis_niloticus
ENSAMXG00000016657	parp4	77	46.667	ENSOCUG00000014529	PARP4	76	46.667	Oryctolagus_cuniculus
ENSAMXG00000016657	parp4	55	62.371	ENSORLG00000018162	parp4	86	62.123	Oryzias_latipes
ENSAMXG00000016657	parp4	55	65.078	ENSORLG00020011392	parp4	87	64.854	Oryzias_latipes_hni
ENSAMXG00000016657	parp4	69	62.263	ENSORLG00015007534	parp4	94	62.263	Oryzias_latipes_hsok
ENSAMXG00000016657	parp4	76	64.925	ENSOMEG00000012305	parp4	87	64.925	Oryzias_melastigma
ENSAMXG00000016657	parp4	78	47.145	ENSOGAG00000016230	PARP4	88	43.949	Otolemur_garnettii
ENSAMXG00000016657	parp4	77	47.343	ENSOARG00000014415	PARP4	79	47.343	Ovis_aries
ENSAMXG00000016657	parp4	78	47.206	ENSPPAG00000024134	PARP4	80	47.206	Pan_paniscus
ENSAMXG00000016657	parp4	77	48.124	ENSPPRG00000009047	PARP4	81	48.130	Panthera_pardus
ENSAMXG00000016657	parp4	78	47.368	ENSPTRG00000005711	PARP4	80	47.368	Pan_troglodytes
ENSAMXG00000016657	parp4	78	47.854	ENSPANG00000006504	PARP4	80	47.854	Papio_anubis
ENSAMXG00000016657	parp4	67	56.132	ENSPSIG00000014196	PARP4	75	56.132	Pelodiscus_sinensis
ENSAMXG00000016657	parp4	60	69.767	ENSPMGG00000007212	parp4	90	63.523	Periophthalmus_magnuspinnatus
ENSAMXG00000016657	parp4	73	47.159	ENSPCIG00000017800	-	98	50.051	Phascolarctos_cinereus
ENSAMXG00000016657	parp4	78	61.576	ENSPFOG00000002081	parp4	99	61.835	Poecilia_formosa
ENSAMXG00000016657	parp4	60	62.268	ENSPLAG00000019059	parp4	91	61.954	Poecilia_latipinna
ENSAMXG00000016657	parp4	62	65.846	ENSPLAG00000021665	parp4	86	65.564	Poecilia_latipinna
ENSAMXG00000016657	parp4	60	62.268	ENSPMEG00000016931	-	91	61.954	Poecilia_mexicana
ENSAMXG00000016657	parp4	58	61.464	ENSPMEG00000017006	parp4	89	61.464	Poecilia_mexicana
ENSAMXG00000016657	parp4	78	45.090	ENSPCOG00000022852	PARP4	91	45.090	Propithecus_coquereli
ENSAMXG00000016657	parp4	75	46.949	ENSPVAG00000016461	PARP4	80	46.949	Pteropus_vampyrus
ENSAMXG00000016657	parp4	75	63.659	ENSPNYG00000015691	parp4	73	62.101	Pundamilia_nyererei
ENSAMXG00000016657	parp4	58	83.060	ENSPNAG00000019054	parp4	68	83.264	Pygocentrus_nattereri
ENSAMXG00000016657	parp4	78	46.154	ENSRBIG00000040334	PARP4	80	46.154	Rhinopithecus_bieti
ENSAMXG00000016657	parp4	78	45.904	ENSRROG00000040417	PARP4	80	45.904	Rhinopithecus_roxellana
ENSAMXG00000016657	parp4	67	66.064	ENSSDUG00000014635	parp4	94	66.064	Seriola_dumerili
ENSAMXG00000016657	parp4	71	63.570	ENSSLDG00000022915	parp4	76	63.317	Seriola_lalandi_dorsalis
ENSAMXG00000016657	parp4	65	67.925	ENSSPAG00000010424	parp4	89	67.925	Stegastes_partitus
ENSAMXG00000016657	parp4	78	47.600	ENSSSCG00000022957	PARP4	72	47.364	Sus_scrofa
ENSAMXG00000016657	parp4	79	59.518	ENSTNIG00000015654	parp4	99	60.511	Tetraodon_nigroviridis
ENSAMXG00000016657	parp4	63	43.186	ENSUAMG00000027134	-	92	46.354	Ursus_americanus
ENSAMXG00000016657	parp4	77	47.390	ENSUMAG00000013978	PARP4	80	47.390	Ursus_maritimus
ENSAMXG00000016657	parp4	76	46.769	ENSVVUG00000006363	PARP4	80	46.769	Vulpes_vulpes
ENSAMXG00000016657	parp4	69	46.753	ENSXETG00000002639	-	98	46.375	Xenopus_tropicalis