EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000016665 (Gene tree)
Gene ID: 103041585
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5071 bases
Position: chr13:29953449-29958519
Accession: 103041585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017163	dsrm	PF00035.26	3.9e-35	1	2
ENSAMXP00000017163	dsrm	PF00035.26	3.9e-35	2	2
ENSAMXP00000017163	DND1_DSRM	PF14709.7	5.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017163	-	1335	XM_007253373	ENSAMXP00000017163	344 (aa)	XP_007253435	W5LBF1

Gene Model

Click here to download ENSAMXG00000016665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000016665	tarbp2	98	44.940	ENSAMXG00000034602	prkra	98	44.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016665	tarbp2	99	64.481	ENSG00000139546	TARBP2	100	66.954	Homo_sapiens
ENSAMXG00000016665	tarbp2	100	82.948	ENSAPOG00000019892	tarbp2	100	84.104	Acanthochromis_polyacanthus
ENSAMXG00000016665	tarbp2	99	65.301	ENSAMEG00000012601	TARBP2	99	65.847	Ailuropoda_melanoleuca
ENSAMXG00000016665	tarbp2	100	82.081	ENSACIG00000016780	tarbp2	100	82.370	Amphilophus_citrinellus
ENSAMXG00000016665	tarbp2	100	83.237	ENSAOCG00000005201	tarbp2	100	84.393	Amphiprion_ocellaris
ENSAMXG00000016665	tarbp2	100	83.237	ENSAPEG00000008376	tarbp2	100	84.393	Amphiprion_percula
ENSAMXG00000016665	tarbp2	100	82.659	ENSATEG00000025012	tarbp2	100	83.815	Anabas_testudineus
ENSAMXG00000016665	tarbp2	100	70.083	ENSACAG00000001100	TARBP2	58	77.404	Anolis_carolinensis
ENSAMXG00000016665	tarbp2	99	64.754	ENSANAG00000034453	TARBP2	90	78.873	Aotus_nancymaae
ENSAMXG00000016665	tarbp2	95	83.587	ENSACLG00000018569	tarbp2	97	82.440	Astatotilapia_calliptera
ENSAMXG00000016665	tarbp2	99	65.301	ENSBTAG00000000435	TARBP2	99	65.574	Bos_taurus
ENSAMXG00000016665	tarbp2	99	64.754	ENSCJAG00000018668	TARBP2	99	65.027	Callithrix_jacchus
ENSAMXG00000016665	tarbp2	99	68.696	ENSCAFG00000006874	TARBP2	99	68.406	Canis_familiaris
ENSAMXG00000016665	tarbp2	99	64.481	ENSCAFG00020020735	TARBP2	100	67.529	Canis_lupus_dingo
ENSAMXG00000016665	tarbp2	99	64.324	ENSCHIG00000026017	TARBP2	99	64.324	Capra_hircus
ENSAMXG00000016665	tarbp2	99	65.301	ENSTSYG00000035683	TARBP2	90	78.873	Carlito_syrichta
ENSAMXG00000016665	tarbp2	64	69.196	ENSCAPG00000008981	TARBP2	94	71.090	Cavia_aperea
ENSAMXG00000016665	tarbp2	99	65.027	ENSCPOG00000001009	TARBP2	99	65.027	Cavia_porcellus
ENSAMXG00000016665	tarbp2	99	65.123	ENSCCAG00000033025	TARBP2	91	94.340	Cebus_capucinus
ENSAMXG00000016665	tarbp2	96	66.197	ENSCATG00000026344	TARBP2	92	79.452	Cercocebus_atys
ENSAMXG00000016665	tarbp2	99	65.110	ENSCLAG00000009175	TARBP2	99	64.754	Chinchilla_lanigera
ENSAMXG00000016665	tarbp2	96	66.479	ENSCSAG00000005479	TARBP2	96	67.042	Chlorocebus_sabaeus
ENSAMXG00000016665	tarbp2	99	70.308	ENSCPBG00000000654	TARBP2	61	77.404	Chrysemys_picta_bellii
ENSAMXG00000016665	tarbp2	99	64.578	ENSCANG00000040415	TARBP2	91	92.453	Colobus_angolensis_palliatus
ENSAMXG00000016665	tarbp2	99	65.470	ENSCGRG00001011856	TARBP2	99	64.932	Cricetulus_griseus_chok1gshd
ENSAMXG00000016665	tarbp2	99	65.470	ENSCGRG00000009088	TARBP2	100	65.447	Cricetulus_griseus_crigri
ENSAMXG00000016665	tarbp2	100	83.237	ENSCSEG00000010631	tarbp2	100	83.237	Cynoglossus_semilaevis
ENSAMXG00000016665	tarbp2	100	84.393	ENSCVAG00000009832	tarbp2	100	84.393	Cyprinodon_variegatus
ENSAMXG00000016665	tarbp2	100	88.793	ENSDARG00000070471	tarbp2	100	88.793	Danio_rerio
ENSAMXG00000016665	tarbp2	99	64.754	ENSDNOG00000002144	TARBP2	99	65.027	Dasypus_novemcinctus
ENSAMXG00000016665	tarbp2	63	70.588	ENSDORG00000001390	Tarbp2	87	72.038	Dipodomys_ordii
ENSAMXG00000016665	tarbp2	86	80.412	ENSETEG00000002458	TARBP2	76	78.947	Echinops_telfairi
ENSAMXG00000016665	tarbp2	95	59.146	ENSEBUG00000002377	tarbp2	98	58.788	Eptatretus_burgeri
ENSAMXG00000016665	tarbp2	99	65.301	ENSEASG00005010030	TARBP2	99	65.574	Equus_asinus_asinus
ENSAMXG00000016665	tarbp2	99	68.195	ENSECAG00000011695	TARBP2	90	78.873	Equus_caballus
ENSAMXG00000016665	tarbp2	84	63.430	ENSEEUG00000001128	-	74	78.947	Erinaceus_europaeus
ENSAMXG00000016665	tarbp2	100	84.726	ENSELUG00000010642	tarbp2	100	85.303	Esox_lucius
ENSAMXG00000016665	tarbp2	99	64.754	ENSFCAG00000007757	TARBP2	99	66.120	Felis_catus
ENSAMXG00000016665	tarbp2	99	65.565	ENSFDAG00000011932	TARBP2	100	66.397	Fukomys_damarensis
ENSAMXG00000016665	tarbp2	94	85.231	ENSFHEG00000016118	tarbp2	100	85.231	Fundulus_heteroclitus
ENSAMXG00000016665	tarbp2	100	80.460	ENSGMOG00000001290	tarbp2	100	80.460	Gadus_morhua
ENSAMXG00000016665	tarbp2	65	73.543	ENSGALG00000038939	-	79	76.555	Gallus_gallus
ENSAMXG00000016665	tarbp2	100	83.526	ENSGAFG00000013341	tarbp2	100	80.791	Gambusia_affinis
ENSAMXG00000016665	tarbp2	100	80.845	ENSGACG00000006645	tarbp2	100	81.127	Gasterosteus_aculeatus
ENSAMXG00000016665	tarbp2	97	71.714	ENSGAGG00000021169	TARBP2	58	77.885	Gopherus_agassizii
ENSAMXG00000016665	tarbp2	99	64.850	ENSGGOG00000012637	TARBP2	92	79.452	Gorilla_gorilla
ENSAMXG00000016665	tarbp2	100	82.659	ENSHBUG00000018639	tarbp2	100	82.948	Haplochromis_burtoni
ENSAMXG00000016665	tarbp2	99	64.481	ENSHGLG00000001284	TARBP2	99	64.754	Heterocephalus_glaber_female
ENSAMXG00000016665	tarbp2	99	64.481	ENSHGLG00100011274	TARBP2	99	64.754	Heterocephalus_glaber_male
ENSAMXG00000016665	tarbp2	100	79.769	ENSHCOG00000001027	tarbp2	100	79.769	Hippocampus_comes
ENSAMXG00000016665	tarbp2	100	88.793	ENSIPUG00000023701	tarbp2	100	88.793	Ictalurus_punctatus
ENSAMXG00000016665	tarbp2	99	65.934	ENSSTOG00000003678	TARBP2	77	72.512	Ictidomys_tridecemlineatus
ENSAMXG00000016665	tarbp2	100	85.549	ENSKMAG00000012142	tarbp2	100	85.260	Kryptolebias_marmoratus
ENSAMXG00000016665	tarbp2	100	83.099	ENSLBEG00000015027	tarbp2	100	82.817	Labrus_bergylta
ENSAMXG00000016665	tarbp2	99	64.223	ENSLACG00000007087	TARBP2	80	78.571	Latimeria_chalumnae
ENSAMXG00000016665	tarbp2	100	83.573	ENSLOCG00000005711	tarbp2	100	83.285	Lepisosteus_oculatus
ENSAMXG00000016665	tarbp2	73	61.765	ENSLAFG00000002620	TARBP2	95	60.662	Loxodonta_africana
ENSAMXG00000016665	tarbp2	96	66.197	ENSMFAG00000013567	TARBP2	92	79.452	Macaca_fascicularis
ENSAMXG00000016665	tarbp2	96	66.479	ENSMMUG00000018492	TARBP2	96	67.324	Macaca_mulatta
ENSAMXG00000016665	tarbp2	96	66.197	ENSMNEG00000036477	TARBP2	92	79.452	Macaca_nemestrina
ENSAMXG00000016665	tarbp2	99	65.318	ENSMLEG00000029583	TARBP2	92	79.452	Mandrillus_leucophaeus
ENSAMXG00000016665	tarbp2	95	82.317	ENSMAMG00000010272	tarbp2	97	81.871	Mastacembelus_armatus
ENSAMXG00000016665	tarbp2	100	82.659	ENSMZEG00005006895	tarbp2	100	82.948	Maylandia_zebra
ENSAMXG00000016665	tarbp2	99	65.470	ENSMAUG00000019805	Tarbp2	99	64.932	Mesocricetus_auratus
ENSAMXG00000016665	tarbp2	94	66.092	ENSMICG00000027441	TARBP2	90	78.873	Microcebus_murinus
ENSAMXG00000016665	tarbp2	99	66.484	ENSMOCG00000003691	Tarbp2	99	65.385	Microtus_ochrogaster
ENSAMXG00000016665	tarbp2	94	84.290	ENSMMOG00000010374	tarbp2	100	81.711	Mola_mola
ENSAMXG00000016665	tarbp2	100	81.792	ENSMALG00000009773	tarbp2	100	82.370	Monopterus_albus
ENSAMXG00000016665	tarbp2	99	65.301	MGP_CAROLIEiJ_G0020356	Tarbp2	91	94.340	Mus_caroli
ENSAMXG00000016665	tarbp2	99	65.301	ENSMUSG00000023051	Tarbp2	91	94.340	Mus_musculus
ENSAMXG00000016665	tarbp2	99	65.301	MGP_PahariEiJ_G0020355	Tarbp2	91	94.340	Mus_pahari
ENSAMXG00000016665	tarbp2	99	65.301	MGP_SPRETEiJ_G0021249	Tarbp2	91	94.340	Mus_spretus
ENSAMXG00000016665	tarbp2	99	66.027	ENSMPUG00000005944	TARBP2	99	65.205	Mustela_putorius_furo
ENSAMXG00000016665	tarbp2	99	66.120	ENSMLUG00000010035	TARBP2	99	66.120	Myotis_lucifugus
ENSAMXG00000016665	tarbp2	99	64.481	ENSNLEG00000017690	TARBP2	90	78.873	Nomascus_leucogenys
ENSAMXG00000016665	tarbp2	96	72.289	ENSMEUG00000001916	TARBP2	96	70.695	Notamacropus_eugenii
ENSAMXG00000016665	tarbp2	64	70.089	ENSOPRG00000011397	TARBP2	94	71.564	Ochotona_princeps
ENSAMXG00000016665	tarbp2	60	69.469	ENSODEG00000013413	TARBP2	100	68.559	Octodon_degus
ENSAMXG00000016665	tarbp2	95	79.083	ENSONIG00000005115	tarbp2	96	79.083	Oreochromis_niloticus
ENSAMXG00000016665	tarbp2	99	66.485	ENSOCUG00000005700	TARBP2	79	80.769	Oryctolagus_cuniculus
ENSAMXG00000016665	tarbp2	100	83.237	ENSORLG00000005209	tarbp2	100	80.791	Oryzias_latipes
ENSAMXG00000016665	tarbp2	100	83.237	ENSORLG00020017755	tarbp2	100	80.791	Oryzias_latipes_hni
ENSAMXG00000016665	tarbp2	100	83.237	ENSORLG00015013237	tarbp2	100	80.791	Oryzias_latipes_hsok
ENSAMXG00000016665	tarbp2	100	84.682	ENSOMEG00000018860	tarbp2	100	81.638	Oryzias_melastigma
ENSAMXG00000016665	tarbp2	99	64.208	ENSOGAG00000001744	TARBP2	58	71.090	Otolemur_garnettii
ENSAMXG00000016665	tarbp2	99	65.027	ENSOARG00000016437	TARBP2	99	66.120	Ovis_aries
ENSAMXG00000016665	tarbp2	99	64.481	ENSPPAG00000030429	TARBP2	90	78.873	Pan_paniscus
ENSAMXG00000016665	tarbp2	99	64.754	ENSPPRG00000000189	TARBP2	99	65.574	Panthera_pardus
ENSAMXG00000016665	tarbp2	99	68.079	ENSPTIG00000007859	TARBP2	99	67.131	Panthera_tigris_altaica
ENSAMXG00000016665	tarbp2	99	64.481	ENSPTRG00000005020	TARBP2	90	78.873	Pan_troglodytes
ENSAMXG00000016665	tarbp2	96	66.197	ENSPANG00000010689	TARBP2	92	79.452	Papio_anubis
ENSAMXG00000016665	tarbp2	100	82.303	ENSPKIG00000002455	tarbp2	100	82.535	Paramormyrops_kingsleyae
ENSAMXG00000016665	tarbp2	100	83.815	ENSPMGG00000006497	tarbp2	100	81.073	Periophthalmus_magnuspinnatus
ENSAMXG00000016665	tarbp2	99	65.205	ENSPEMG00000014285	Tarbp2	99	64.658	Peromyscus_maniculatus_bairdii
ENSAMXG00000016665	tarbp2	93	61.875	ENSPMAG00000000105	tarbp2	99	57.500	Petromyzon_marinus
ENSAMXG00000016665	tarbp2	96	72.508	ENSPCIG00000006672	TARBP2	89	72.508	Phascolarctos_cinereus
ENSAMXG00000016665	tarbp2	100	84.393	ENSPFOG00000007586	tarbp2	100	81.638	Poecilia_formosa
ENSAMXG00000016665	tarbp2	100	84.104	ENSPLAG00000017659	tarbp2	100	81.356	Poecilia_latipinna
ENSAMXG00000016665	tarbp2	100	84.393	ENSPMEG00000007775	tarbp2	100	81.638	Poecilia_mexicana
ENSAMXG00000016665	tarbp2	100	84.104	ENSPREG00000007815	tarbp2	100	81.356	Poecilia_reticulata
ENSAMXG00000016665	tarbp2	99	66.185	ENSPPYG00000004583	TARBP2	99	67.147	Pongo_abelii
ENSAMXG00000016665	tarbp2	63	71.041	ENSPCAG00000005352	TARBP2	58	72.512	Procavia_capensis
ENSAMXG00000016665	tarbp2	99	65.027	ENSPCOG00000013102	TARBP2	90	78.873	Propithecus_coquereli
ENSAMXG00000016665	tarbp2	99	65.289	ENSPVAG00000012286	TARBP2	78	80.263	Pteropus_vampyrus
ENSAMXG00000016665	tarbp2	100	82.659	ENSPNYG00000014125	tarbp2	100	82.948	Pundamilia_nyererei
ENSAMXG00000016665	tarbp2	100	95.362	ENSPNAG00000011128	tarbp2	100	95.362	Pygocentrus_nattereri
ENSAMXG00000016665	tarbp2	99	64.481	ENSRNOG00000042355	Tarbp2	99	64.481	Rattus_norvegicus
ENSAMXG00000016665	tarbp2	99	65.123	ENSRBIG00000027150	TARBP2	92	79.452	Rhinopithecus_bieti
ENSAMXG00000016665	tarbp2	99	65.123	ENSRROG00000044783	TARBP2	92	79.452	Rhinopithecus_roxellana
ENSAMXG00000016665	tarbp2	99	64.481	ENSSBOG00000027305	TARBP2	90	78.873	Saimiri_boliviensis_boliviensis
ENSAMXG00000016665	tarbp2	94	72.615	ENSSHAG00000007064	TARBP2	100	71.605	Sarcophilus_harrisii
ENSAMXG00000016665	tarbp2	100	81.513	ENSSFOG00015010784	tarbp2	100	80.392	Scleropages_formosus
ENSAMXG00000016665	tarbp2	100	82.102	ENSSMAG00000012769	tarbp2	100	82.955	Scophthalmus_maximus
ENSAMXG00000016665	tarbp2	100	84.393	ENSSDUG00000018818	tarbp2	100	85.549	Seriola_dumerili
ENSAMXG00000016665	tarbp2	100	84.104	ENSSLDG00000001835	tarbp2	100	85.260	Seriola_lalandi_dorsalis
ENSAMXG00000016665	tarbp2	75	67.164	ENSSARG00000001010	TARBP2	71	67.164	Sorex_araneus
ENSAMXG00000016665	tarbp2	63	91.228	ENSSPUG00000005895	TARBP2	67	89.831	Sphenodon_punctatus
ENSAMXG00000016665	tarbp2	100	84.971	ENSSPAG00000022797	tarbp2	100	81.921	Stegastes_partitus
ENSAMXG00000016665	tarbp2	99	64.754	ENSSSCG00000000276	TARBP2	100	66.954	Sus_scrofa
ENSAMXG00000016665	tarbp2	71	57.480	ENSTGUG00000017031	TARBP2	70	81.967	Taeniopygia_guttata
ENSAMXG00000016665	tarbp2	100	84.971	ENSTRUG00000014379	tarbp2	100	81.921	Takifugu_rubripes
ENSAMXG00000016665	tarbp2	100	84.104	ENSTNIG00000007065	tarbp2	100	83.815	Tetraodon_nigroviridis
ENSAMXG00000016665	tarbp2	96	66.761	ENSTTRG00000017177	TARBP2	96	67.887	Tursiops_truncatus
ENSAMXG00000016665	tarbp2	99	65.301	ENSUAMG00000009011	TARBP2	99	66.393	Ursus_americanus
ENSAMXG00000016665	tarbp2	99	64.754	ENSUMAG00000010461	TARBP2	99	65.847	Ursus_maritimus
ENSAMXG00000016665	tarbp2	99	64.481	ENSVVUG00000028150	TARBP2	100	67.529	Vulpes_vulpes
ENSAMXG00000016665	tarbp2	98	70.809	ENSXETG00000012644	tarbp2	98	69.364	Xenopus_tropicalis
ENSAMXG00000016665	tarbp2	100	84.682	ENSXMAG00000017836	tarbp2	100	81.921	Xiphophorus_maculatus