EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016671 (Gene tree)
Gene ID: 103045322
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 24519 bases
Position: chrAPWO02002203.1:167161-191679
Accession: 103045322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017177	ARS2	PF04959.13	2.2e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017177	-	4185	XM_022664224	ENSAMXP00000017177	891 (aa)	XP_022519945	W5LBG5

Gene Model

Click here to download ENSAMXG00000016671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016671	srrt	50	77.042	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSAMXG00000016671	srrt	93	64.937	ENSAMEG00000014506	SRRT	50	77.111	Ailuropoda_melanoleuca
ENSAMXG00000016671	srrt	81	82.851	ENSACIG00000015795	srrt	89	81.292	Amphilophus_citrinellus
ENSAMXG00000016671	srrt	81	82.301	ENSAOCG00000009693	srrt	87	81.292	Amphiprion_ocellaris
ENSAMXG00000016671	srrt	89	54.028	ENSAOCG00000009189	-	51	65.208	Amphiprion_ocellaris
ENSAMXG00000016671	srrt	81	82.080	ENSAPEG00000003646	srrt	89	81.069	Amphiprion_percula
ENSAMXG00000016671	srrt	89	54.028	ENSAPEG00000020016	-	51	65.208	Amphiprion_percula
ENSAMXG00000016671	srrt	92	74.408	ENSATEG00000014425	srrt	87	82.143	Anabas_testudineus
ENSAMXG00000016671	srrt	52	60.494	ENSATEG00000003652	-	84	63.261	Anabas_testudineus
ENSAMXG00000016671	srrt	50	75.778	ENSACAG00000001014	SRRT	51	77.009	Anolis_carolinensis
ENSAMXG00000016671	srrt	50	75.870	ENSANAG00000031718	SRRT	52	75.381	Aotus_nancymaae
ENSAMXG00000016671	srrt	50	75.652	ENSBTAG00000001134	SRRT	52	75.163	Bos_taurus
ENSAMXG00000016671	srrt	72	42.350	WBGene00017085	E01A2.2	84	41.113	Caenorhabditis_elegans
ENSAMXG00000016671	srrt	50	75.217	ENSCJAG00000014917	SRRT	52	75.163	Callithrix_jacchus
ENSAMXG00000016671	srrt	93	65.258	ENSCAFG00000023538	SRRT	52	75.163	Canis_familiaris
ENSAMXG00000016671	srrt	95	64.787	ENSCAFG00020013358	SRRT	51	77.578	Canis_lupus_dingo
ENSAMXG00000016671	srrt	93	64.046	ENSCHIG00000010495	SRRT	82	75.711	Capra_hircus
ENSAMXG00000016671	srrt	92	62.877	ENSTSYG00000036426	SRRT	55	76.149	Carlito_syrichta
ENSAMXG00000016671	srrt	50	76.667	ENSCAPG00000013586	SRRT	88	71.121	Cavia_aperea
ENSAMXG00000016671	srrt	93	64.327	ENSCPOG00000001739	SRRT	52	74.783	Cavia_porcellus
ENSAMXG00000016671	srrt	50	75.870	ENSCCAG00000015877	SRRT	52	75.381	Cebus_capucinus
ENSAMXG00000016671	srrt	50	75.930	ENSCATG00000036306	SRRT	54	74.200	Cercocebus_atys
ENSAMXG00000016671	srrt	93	65.023	ENSCLAG00000007568	SRRT	88	71.367	Chinchilla_lanigera
ENSAMXG00000016671	srrt	50	75.870	ENSCSAG00000017996	SRRT	52	75.381	Chlorocebus_sabaeus
ENSAMXG00000016671	srrt	54	71.154	ENSCHOG00000007815	SRRT	67	71.154	Choloepus_hoffmanni
ENSAMXG00000016671	srrt	71	69.811	ENSCPBG00000011553	SRRT	83	68.841	Chrysemys_picta_bellii
ENSAMXG00000016671	srrt	97	41.477	ENSCING00000003506	-	54	51.875	Ciona_intestinalis
ENSAMXG00000016671	srrt	86	43.532	ENSCSAVG00000008394	-	81	56.980	Ciona_savignyi
ENSAMXG00000016671	srrt	50	75.930	ENSCANG00000034556	SRRT	52	75.930	Colobus_angolensis_palliatus
ENSAMXG00000016671	srrt	93	64.335	ENSCGRG00001001594	Srrt	52	75.599	Cricetulus_griseus_chok1gshd
ENSAMXG00000016671	srrt	86	78.481	ENSCGRG00000007292	Srrt	87	71.800	Cricetulus_griseus_crigri
ENSAMXG00000016671	srrt	52	61.684	ENSCSEG00000005233	-	53	63.797	Cynoglossus_semilaevis
ENSAMXG00000016671	srrt	88	54.569	ENSCVAG00000017344	-	52	63.844	Cyprinodon_variegatus
ENSAMXG00000016671	srrt	92	82.921	ENSDARG00000017762	srrt	95	83.039	Danio_rerio
ENSAMXG00000016671	srrt	50	75.870	ENSDNOG00000003851	SRRT	52	75.381	Dasypus_novemcinctus
ENSAMXG00000016671	srrt	93	64.535	ENSDORG00000005584	Srrt	88	72.648	Dipodomys_ordii
ENSAMXG00000016671	srrt	87	41.592	FBgn0033062	Ars2	68	51.392	Drosophila_melanogaster
ENSAMXG00000016671	srrt	81	68.500	ENSETEG00000016175	SRRT	70	76.129	Echinops_telfairi
ENSAMXG00000016671	srrt	60	59.494	ENSEBUG00000008517	-	75	59.524	Eptatretus_burgeri
ENSAMXG00000016671	srrt	93	65.574	ENSEASG00005016956	SRRT	52	75.381	Equus_asinus_asinus
ENSAMXG00000016671	srrt	93	65.691	ENSECAG00000012292	SRRT	52	75.381	Equus_caballus
ENSAMXG00000016671	srrt	78	75.248	ENSEEUG00000009117	SRRT	56	83.784	Erinaceus_europaeus
ENSAMXG00000016671	srrt	89	56.956	ENSELUG00000021216	-	52	66.883	Esox_lucius
ENSAMXG00000016671	srrt	93	65.493	ENSFCAG00000006855	SRRT	52	75.381	Felis_catus
ENSAMXG00000016671	srrt	50	73.034	ENSFDAG00000021347	SRRT	87	70.112	Fukomys_damarensis
ENSAMXG00000016671	srrt	52	56.639	ENSFHEG00000004105	-	92	56.774	Fundulus_heteroclitus
ENSAMXG00000016671	srrt	71	84.716	ENSFHEG00000002756	srrt	86	84.848	Fundulus_heteroclitus
ENSAMXG00000016671	srrt	92	68.787	ENSGMOG00000018619	srrt	50	77.354	Gadus_morhua
ENSAMXG00000016671	srrt	63	64.465	ENSGMOG00000018694	-	76	64.692	Gadus_morhua
ENSAMXG00000016671	srrt	50	62.963	ENSGAFG00000020383	-	53	63.077	Gambusia_affinis
ENSAMXG00000016671	srrt	89	51.643	ENSGACG00000001100	-	51	63.297	Gasterosteus_aculeatus
ENSAMXG00000016671	srrt	50	75.930	ENSGGOG00000001508	SRRT	60	71.271	Gorilla_gorilla
ENSAMXG00000016671	srrt	93	64.794	ENSHGLG00000008344	Srrt	88	70.933	Heterocephalus_glaber_female
ENSAMXG00000016671	srrt	93	64.557	ENSHGLG00100018857	Srrt	88	72.648	Heterocephalus_glaber_male
ENSAMXG00000016671	srrt	95	71.972	ENSHCOG00000005403	srrt	55	76.821	Hippocampus_comes
ENSAMXG00000016671	srrt	89	53.250	ENSHCOG00000008904	-	54	62.889	Hippocampus_comes
ENSAMXG00000016671	srrt	89	83.231	ENSIPUG00000021150	srrt	95	82.464	Ictalurus_punctatus
ENSAMXG00000016671	srrt	50	75.930	ENSSTOG00000013776	SRRT	52	75.930	Ictidomys_tridecemlineatus
ENSAMXG00000016671	srrt	93	64.795	ENSJJAG00000010446	Srrt	88	71.991	Jaculus_jaculus
ENSAMXG00000016671	srrt	92	71.498	ENSKMAG00000013599	srrt	54	80.357	Kryptolebias_marmoratus
ENSAMXG00000016671	srrt	52	62.012	ENSKMAG00000008468	-	52	62.845	Kryptolebias_marmoratus
ENSAMXG00000016671	srrt	92	55.634	ENSLACG00000001089	SRRT	50	60.274	Latimeria_chalumnae
ENSAMXG00000016671	srrt	77	82.958	ENSLOCG00000013658	srrt	71	83.923	Lepisosteus_oculatus
ENSAMXG00000016671	srrt	50	75.870	ENSLAFG00000007725	SRRT	52	75.381	Loxodonta_africana
ENSAMXG00000016671	srrt	50	75.930	ENSMFAG00000033745	SRRT	55	74.200	Macaca_fascicularis
ENSAMXG00000016671	srrt	93	62.683	ENSMMUG00000021255	SRRT	52	75.381	Macaca_mulatta
ENSAMXG00000016671	srrt	50	75.870	ENSMNEG00000041864	SRRT	52	75.381	Macaca_nemestrina
ENSAMXG00000016671	srrt	50	75.930	ENSMLEG00000029479	SRRT	54	74.200	Mandrillus_leucophaeus
ENSAMXG00000016671	srrt	50	75.652	ENSMAUG00000011386	Srrt	88	71.678	Mesocricetus_auratus
ENSAMXG00000016671	srrt	50	75.870	ENSMICG00000009471	SRRT	54	74.200	Microcebus_murinus
ENSAMXG00000016671	srrt	93	64.253	ENSMOCG00000001971	Srrt	88	72.113	Microtus_ochrogaster
ENSAMXG00000016671	srrt	50	73.319	ENSMODG00000004862	SRRT	87	73.102	Monodelphis_domestica
ENSAMXG00000016671	srrt	55	47.571	ENSMALG00000005567	-	82	50.219	Monopterus_albus
ENSAMXG00000016671	srrt	84	68.823	ENSMALG00000018604	srrt	83	76.116	Monopterus_albus
ENSAMXG00000016671	srrt	50	77.111	MGP_CAROLIEiJ_G0027870	Srrt	99	73.333	Mus_caroli
ENSAMXG00000016671	srrt	50	77.111	ENSMUSG00000037364	Srrt	99	73.333	Mus_musculus
ENSAMXG00000016671	srrt	50	77.333	MGP_PahariEiJ_G0024456	Srrt	99	73.333	Mus_pahari
ENSAMXG00000016671	srrt	50	77.111	MGP_SPRETEiJ_G0028875	Srrt	99	73.333	Mus_spretus
ENSAMXG00000016671	srrt	93	65.728	ENSMPUG00000015839	SRRT	52	75.381	Mustela_putorius_furo
ENSAMXG00000016671	srrt	93	64.344	ENSMLUG00000009975	SRRT	52	74.946	Myotis_lucifugus
ENSAMXG00000016671	srrt	93	65.057	ENSNGAG00000023715	Srrt	63	75.381	Nannospalax_galili
ENSAMXG00000016671	srrt	92	58.493	ENSNLEG00000011987	SRRT	86	67.803	Nomascus_leucogenys
ENSAMXG00000016671	srrt	91	55.542	ENSMEUG00000011941	SRRT	51	62.391	Notamacropus_eugenii
ENSAMXG00000016671	srrt	59	75.000	ENSOPRG00000002502	-	66	78.788	Ochotona_princeps
ENSAMXG00000016671	srrt	50	76.889	ENSODEG00000016856	SRRT	88	72.210	Octodon_degus
ENSAMXG00000016671	srrt	50	82.628	ENSONIG00000004242	srrt	51	79.694	Oreochromis_niloticus
ENSAMXG00000016671	srrt	95	71.709	ENSORLG00000008120	srrt	51	80.134	Oryzias_latipes
ENSAMXG00000016671	srrt	95	72.005	ENSORLG00020003058	srrt	51	79.911	Oryzias_latipes_hni
ENSAMXG00000016671	srrt	95	72.005	ENSORLG00015008062	srrt	51	79.911	Oryzias_latipes_hsok
ENSAMXG00000016671	srrt	89	56.280	ENSOMEG00000006963	-	52	65.198	Oryzias_melastigma
ENSAMXG00000016671	srrt	95	70.704	ENSOMEG00000003155	srrt	90	81.473	Oryzias_melastigma
ENSAMXG00000016671	srrt	50	75.870	ENSOGAG00000017242	SRRT	52	75.381	Otolemur_garnettii
ENSAMXG00000016671	srrt	93	64.037	ENSOARG00000015645	SRRT	52	75.711	Ovis_aries
ENSAMXG00000016671	srrt	50	75.930	ENSPPAG00000041090	SRRT	52	75.930	Pan_paniscus
ENSAMXG00000016671	srrt	93	65.607	ENSPPRG00000009557	SRRT	52	75.492	Panthera_pardus
ENSAMXG00000016671	srrt	93	65.493	ENSPTIG00000014355	SRRT	52	75.381	Panthera_tigris_altaica
ENSAMXG00000016671	srrt	50	75.930	ENSPTRG00000019511	SRRT	52	75.930	Pan_troglodytes
ENSAMXG00000016671	srrt	50	74.304	ENSPANG00000020763	SRRT	53	74.200	Papio_anubis
ENSAMXG00000016671	srrt	91	70.531	ENSPKIG00000022212	-	51	81.333	Paramormyrops_kingsleyae
ENSAMXG00000016671	srrt	95	78.082	ENSPKIG00000005434	srrt	95	77.310	Paramormyrops_kingsleyae
ENSAMXG00000016671	srrt	92	64.976	ENSPSIG00000016311	SRRT	51	74.944	Pelodiscus_sinensis
ENSAMXG00000016671	srrt	95	68.925	ENSPMGG00000002841	srrt	55	78.556	Periophthalmus_magnuspinnatus
ENSAMXG00000016671	srrt	93	64.344	ENSPEMG00000010834	Srrt	87	71.991	Peromyscus_maniculatus_bairdii
ENSAMXG00000016671	srrt	92	52.941	ENSPMAG00000009614	-	54	60.645	Petromyzon_marinus
ENSAMXG00000016671	srrt	50	74.130	ENSPCIG00000000816	SRRT	52	74.946	Phascolarctos_cinereus
ENSAMXG00000016671	srrt	50	62.882	ENSPFOG00000016554	-	54	62.939	Poecilia_formosa
ENSAMXG00000016671	srrt	50	62.309	ENSPLAG00000004526	-	54	62.582	Poecilia_latipinna
ENSAMXG00000016671	srrt	74	86.256	ENSPMEG00000001182	srrt	82	86.385	Poecilia_mexicana
ENSAMXG00000016671	srrt	50	75.930	ENSPCOG00000025751	SRRT	52	75.930	Propithecus_coquereli
ENSAMXG00000016671	srrt	63	67.756	ENSPVAG00000000834	SRRT	84	67.249	Pteropus_vampyrus
ENSAMXG00000016671	srrt	92	64.377	ENSPNAG00000010629	srrt	94	67.105	Pygocentrus_nattereri
ENSAMXG00000016671	srrt	50	66.004	ENSRNOG00000048277	AABR07035787.1	90	65.487	Rattus_norvegicus
ENSAMXG00000016671	srrt	50	75.870	ENSRBIG00000035718	SRRT	52	75.381	Rhinopithecus_bieti
ENSAMXG00000016671	srrt	50	75.870	ENSRROG00000030622	SRRT	52	75.381	Rhinopithecus_roxellana
ENSAMXG00000016671	srrt	50	75.930	ENSSBOG00000033570	SRRT	53	75.930	Saimiri_boliviensis_boliviensis
ENSAMXG00000016671	srrt	69	60.896	ENSSHAG00000007349	-	73	74.837	Sarcophilus_harrisii
ENSAMXG00000016671	srrt	91	77.857	ENSSFOG00015017293	srrt	50	86.384	Scleropages_formosus
ENSAMXG00000016671	srrt	52	53.734	ENSSDUG00000002051	-	92	54.936	Seriola_dumerili
ENSAMXG00000016671	srrt	81	82.262	ENSSLDG00000017477	srrt	85	81.473	Seriola_lalandi_dorsalis
ENSAMXG00000016671	srrt	50	56.114	ENSSPAG00000018943	-	91	56.332	Stegastes_partitus
ENSAMXG00000016671	srrt	88	52.882	ENSTRUG00000000023	-	51	60.137	Takifugu_rubripes
ENSAMXG00000016671	srrt	71	64.438	ENSTNIG00000011779	srrt	71	77.657	Tetraodon_nigroviridis
ENSAMXG00000016671	srrt	89	51.446	ENSTNIG00000003111	-	52	62.500	Tetraodon_nigroviridis
ENSAMXG00000016671	srrt	58	77.961	ENSTBEG00000005212	SRRT	57	78.873	Tupaia_belangeri
ENSAMXG00000016671	srrt	97	65.876	ENSTTRG00000011104	SRRT	52	75.381	Tursiops_truncatus
ENSAMXG00000016671	srrt	92	65.762	ENSUAMG00000027997	SRRT	54	75.381	Ursus_americanus
ENSAMXG00000016671	srrt	93	65.340	ENSUMAG00000011295	SRRT	52	75.381	Ursus_maritimus
ENSAMXG00000016671	srrt	93	65.258	ENSVVUG00000023572	SRRT	52	75.163	Vulpes_vulpes
ENSAMXG00000016671	srrt	80	75.410	ENSXETG00000025124	srrt	71	79.503	Xenopus_tropicalis
ENSAMXG00000016671	srrt	52	50.529	ENSXCOG00000013105	-	89	52.993	Xiphophorus_couchianus
ENSAMXG00000016671	srrt	50	62.281	ENSXMAG00000002090	-	53	63.516	Xiphophorus_maculatus
ENSAMXG00000016671	srrt	95	72.643	ENSXMAG00000007627	srrt	89	80.752	Xiphophorus_maculatus