EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000016812 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8368 bases
Position: chr13:29700862-29709229
Accession: 103042509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017307	dsrm	PF00035.26	3.1e-32	1	3
ENSAMXP00000017307	dsrm	PF00035.26	3.1e-32	2	3
ENSAMXP00000017307	dsrm	PF00035.26	3.1e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017307	-	1701	XM_022675658	ENSAMXP00000017307	566 (aa)	XP_022531379	W5LBU5

Gene Model

Click here to download ENSAMXG00000016812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000016812	stau1	98	45.703	ENSAMXG00000000460	stau2	70	44.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016812	stau1	99	70.884	ENSG00000124214	STAU1	100	74.349	Homo_sapiens
ENSAMXG00000016812	stau1	98	78.947	ENSAPOG00000017260	stau1	96	78.947	Acanthochromis_polyacanthus
ENSAMXG00000016812	stau1	99	70.522	ENSAMEG00000013681	STAU1	95	70.522	Ailuropoda_melanoleuca
ENSAMXG00000016812	stau1	98	79.198	ENSACIG00000015918	stau1	88	78.817	Amphilophus_citrinellus
ENSAMXG00000016812	stau1	98	80.075	ENSAOCG00000012224	stau1	96	80.075	Amphiprion_ocellaris
ENSAMXG00000016812	stau1	98	80.263	ENSAPEG00000012308	stau1	96	80.263	Amphiprion_percula
ENSAMXG00000016812	stau1	98	76.523	ENSATEG00000024600	stau1	100	76.799	Anabas_testudineus
ENSAMXG00000016812	stau1	98	75.096	ENSAPLG00000010527	STAU1	73	75.096	Anas_platyrhynchos
ENSAMXG00000016812	stau1	90	74.905	ENSACAG00000015909	STAU1	93	74.905	Anolis_carolinensis
ENSAMXG00000016812	stau1	99	69.811	ENSANAG00000032714	STAU1	100	69.980	Aotus_nancymaae
ENSAMXG00000016812	stau1	98	80.309	ENSACLG00000012270	stau1	96	80.309	Astatotilapia_calliptera
ENSAMXG00000016812	stau1	99	69.844	ENSBTAG00000000241	STAU1	95	72.051	Bos_taurus
ENSAMXG00000016812	stau1	99	70.537	ENSCJAG00000016233	STAU1	95	72.777	Callithrix_jacchus
ENSAMXG00000016812	stau1	99	70.092	ENSCAFG00000011347	STAU1	93	72.232	Canis_familiaris
ENSAMXG00000016812	stau1	99	70.092	ENSCAFG00020017123	STAU1	94	69.104	Canis_lupus_dingo
ENSAMXG00000016812	stau1	99	69.151	ENSCHIG00000001799	-	95	71.325	Capra_hircus
ENSAMXG00000016812	stau1	99	70.191	ENSTSYG00000036179	-	95	72.232	Carlito_syrichta
ENSAMXG00000016812	stau1	86	72.727	ENSCAPG00000017041	STAU1	100	72.525	Cavia_aperea
ENSAMXG00000016812	stau1	84	69.679	ENSCPOG00000005566	STAU1	100	69.679	Cavia_porcellus
ENSAMXG00000016812	stau1	99	69.811	ENSCCAG00000034339	STAU1	95	71.993	Cebus_capucinus
ENSAMXG00000016812	stau1	99	70.711	ENSCATG00000028474	STAU1	100	73.267	Cercocebus_atys
ENSAMXG00000016812	stau1	84	72.691	ENSCLAG00000006516	-	100	72.691	Chinchilla_lanigera
ENSAMXG00000016812	stau1	85	58.788	ENSCLAG00000002784	-	99	58.788	Chinchilla_lanigera
ENSAMXG00000016812	stau1	86	74.148	ENSCSAG00000014986	STAU1	100	74.148	Chlorocebus_sabaeus
ENSAMXG00000016812	stau1	99	70.761	ENSCHOG00000001511	STAU1	95	72.283	Choloepus_hoffmanni
ENSAMXG00000016812	stau1	99	75.665	ENSCPBG00000026741	STAU1	75	75.665	Chrysemys_picta_bellii
ENSAMXG00000016812	stau1	99	70.884	ENSCANG00000039220	STAU1	95	73.140	Colobus_angolensis_palliatus
ENSAMXG00000016812	stau1	84	68.273	ENSCGRG00001013453	Stau1	100	68.273	Cricetulus_griseus_chok1gshd
ENSAMXG00000016812	stau1	84	68.273	ENSCGRG00000007216	Stau1	100	68.273	Cricetulus_griseus_crigri
ENSAMXG00000016812	stau1	98	70.699	ENSCSEG00000000792	stau1	95	71.645	Cynoglossus_semilaevis
ENSAMXG00000016812	stau1	98	75.177	ENSCVAG00000005906	stau1	100	75.887	Cyprinodon_variegatus
ENSAMXG00000016812	stau1	98	82.463	ENSDARG00000044182	stau1	96	82.463	Danio_rerio
ENSAMXG00000016812	stau1	99	70.548	ENSDNOG00000014933	STAU1	93	72.283	Dasypus_novemcinctus
ENSAMXG00000016812	stau1	84	71.341	ENSDORG00000030220	Stau1	100	71.341	Dipodomys_ordii
ENSAMXG00000016812	stau1	86	74.098	ENSETEG00000018235	STAU1	83	74.098	Echinops_telfairi
ENSAMXG00000016812	stau1	99	74.023	ENSEASG00005023343	STAU1	95	71.993	Equus_asinus_asinus
ENSAMXG00000016812	stau1	99	71.375	ENSECAG00000012894	STAU1	95	72.777	Equus_caballus
ENSAMXG00000016812	stau1	68	75.315	ENSEEUG00000014344	STAU1	68	75.315	Erinaceus_europaeus
ENSAMXG00000016812	stau1	98	82.171	ENSELUG00000002529	stau1	91	82.171	Esox_lucius
ENSAMXG00000016812	stau1	99	70.711	ENSFCAG00000001447	STAU1	100	69.777	Felis_catus
ENSAMXG00000016812	stau1	90	75.769	ENSFALG00000012940	STAU1	75	75.769	Ficedula_albicollis
ENSAMXG00000016812	stau1	84	72.289	ENSFDAG00000014119	-	100	72.289	Fukomys_damarensis
ENSAMXG00000016812	stau1	86	57.230	ENSFDAG00000020837	-	100	56.212	Fukomys_damarensis
ENSAMXG00000016812	stau1	98	79.371	ENSFHEG00000013517	stau1	100	76.348	Fundulus_heteroclitus
ENSAMXG00000016812	stau1	98	70.152	ENSGMOG00000016850	stau1	85	70.152	Gadus_morhua
ENSAMXG00000016812	stau1	90	76.154	ENSGALG00000004736	STAU1	75	76.154	Gallus_gallus
ENSAMXG00000016812	stau1	98	79.568	ENSGAFG00000010437	stau1	85	79.568	Gambusia_affinis
ENSAMXG00000016812	stau1	98	78.947	ENSGACG00000001352	stau1	96	78.571	Gasterosteus_aculeatus
ENSAMXG00000016812	stau1	99	76.731	ENSGAGG00000009825	STAU1	75	76.731	Gopherus_agassizii
ENSAMXG00000016812	stau1	99	65.870	ENSGGOG00000025351	STAU1	100	75.749	Gorilla_gorilla
ENSAMXG00000016812	stau1	98	80.502	ENSHBUG00000023668	stau1	96	80.502	Haplochromis_burtoni
ENSAMXG00000016812	stau1	84	73.374	ENSHGLG00000008730	STAU1	100	73.374	Heterocephalus_glaber_female
ENSAMXG00000016812	stau1	84	73.374	ENSHGLG00100000098	STAU1	100	73.374	Heterocephalus_glaber_male
ENSAMXG00000016812	stau1	99	76.517	ENSHCOG00000018461	stau1	92	76.517	Hippocampus_comes
ENSAMXG00000016812	stau1	94	89.189	ENSIPUG00000023725	stau1	91	89.189	Ictalurus_punctatus
ENSAMXG00000016812	stau1	84	72.449	ENSSTOG00000003634	STAU1	100	72.449	Ictidomys_tridecemlineatus
ENSAMXG00000016812	stau1	84	71.341	ENSJJAG00000020032	Stau1	100	71.341	Jaculus_jaculus
ENSAMXG00000016812	stau1	98	77.143	ENSKMAG00000007135	stau1	84	78.095	Kryptolebias_marmoratus
ENSAMXG00000016812	stau1	98	80.550	ENSLBEG00000020172	stau1	85	80.550	Labrus_bergylta
ENSAMXG00000016812	stau1	98	77.603	ENSLACG00000016157	STAU1	76	73.481	Latimeria_chalumnae
ENSAMXG00000016812	stau1	99	80.473	ENSLOCG00000003134	stau1	85	81.460	Lepisosteus_oculatus
ENSAMXG00000016812	stau1	88	73.828	ENSLAFG00000003238	STAU1	100	73.828	Loxodonta_africana
ENSAMXG00000016812	stau1	99	70.711	ENSMFAG00000040931	STAU1	99	74.725	Macaca_fascicularis
ENSAMXG00000016812	stau1	99	65.870	ENSMMUG00000002302	STAU1	99	74.725	Macaca_mulatta
ENSAMXG00000016812	stau1	99	70.711	ENSMNEG00000033821	STAU1	100	73.267	Macaca_nemestrina
ENSAMXG00000016812	stau1	99	70.711	ENSMLEG00000031383	STAU1	95	72.958	Mandrillus_leucophaeus
ENSAMXG00000016812	stau1	98	82.353	ENSMAMG00000017586	stau1	100	80.075	Mastacembelus_armatus
ENSAMXG00000016812	stau1	98	78.879	ENSMZEG00005015605	stau1	96	78.879	Maylandia_zebra
ENSAMXG00000016812	stau1	98	75.287	ENSMGAG00000004719	STAU1	73	75.287	Meleagris_gallopavo
ENSAMXG00000016812	stau1	84	68.474	ENSMAUG00000013846	Stau1	100	68.474	Mesocricetus_auratus
ENSAMXG00000016812	stau1	99	68.503	ENSMICG00000001995	STAU1	95	70.631	Microcebus_murinus
ENSAMXG00000016812	stau1	85	69.028	ENSMOCG00000018743	Stau1	100	69.076	Microtus_ochrogaster
ENSAMXG00000016812	stau1	99	74.725	ENSMMOG00000015455	stau1	99	80.287	Mola_mola
ENSAMXG00000016812	stau1	99	72.862	ENSMODG00000016276	STAU1	80	72.862	Monodelphis_domestica
ENSAMXG00000016812	stau1	98	81.569	ENSMALG00000000045	stau1	96	79.323	Monopterus_albus
ENSAMXG00000016812	stau1	84	69.309	MGP_CAROLIEiJ_G0024699	Stau1	100	69.753	Mus_caroli
ENSAMXG00000016812	stau1	84	69.512	ENSMUSG00000039536	Stau1	100	69.959	Mus_musculus
ENSAMXG00000016812	stau1	84	68.902	MGP_PahariEiJ_G0026141	Stau1	100	68.902	Mus_pahari
ENSAMXG00000016812	stau1	84	69.309	MGP_SPRETEiJ_G0025619	Stau1	100	69.753	Mus_spretus
ENSAMXG00000016812	stau1	98	70.998	ENSMPUG00000017581	STAU1	94	70.998	Mustela_putorius_furo
ENSAMXG00000016812	stau1	99	69.297	ENSMLUG00000008407	STAU1	93	71.688	Myotis_lucifugus
ENSAMXG00000016812	stau1	84	70.363	ENSNGAG00000007108	Stau1	100	70.363	Nannospalax_galili
ENSAMXG00000016812	stau1	98	80.502	ENSNBRG00000017596	stau1	96	80.502	Neolamprologus_brichardi
ENSAMXG00000016812	stau1	99	70.537	ENSNLEG00000006955	STAU1	100	73.069	Nomascus_leucogenys
ENSAMXG00000016812	stau1	99	66.839	ENSMEUG00000003263	STAU1	100	67.185	Notamacropus_eugenii
ENSAMXG00000016812	stau1	93	70.221	ENSOPRG00000014569	STAU1	95	70.037	Ochotona_princeps
ENSAMXG00000016812	stau1	86	72.745	ENSODEG00000006523	STAU1	100	72.745	Octodon_degus
ENSAMXG00000016812	stau1	98	80.309	ENSONIG00000004152	stau1	95	80.309	Oreochromis_niloticus
ENSAMXG00000016812	stau1	98	72.458	ENSOANG00000006394	STAU1	77	72.458	Ornithorhynchus_anatinus
ENSAMXG00000016812	stau1	99	70.017	ENSOCUG00000006214	STAU1	99	70.017	Oryctolagus_cuniculus
ENSAMXG00000016812	stau1	99	77.196	ENSOMEG00000002388	stau1	89	76.636	Oryzias_melastigma
ENSAMXG00000016812	stau1	99	70.154	ENSOGAG00000002127	STAU1	98	70.154	Otolemur_garnettii
ENSAMXG00000016812	stau1	85	51.911	ENSOGAG00000028222	-	99	51.210	Otolemur_garnettii
ENSAMXG00000016812	stau1	99	69.888	ENSOARG00000012204	STAU1	93	71.325	Ovis_aries
ENSAMXG00000016812	stau1	99	65.870	ENSPPAG00000032023	STAU1	100	75.749	Pan_paniscus
ENSAMXG00000016812	stau1	99	70.711	ENSPPRG00000003436	STAU1	100	73.948	Panthera_pardus
ENSAMXG00000016812	stau1	99	70.711	ENSPTIG00000011768	STAU1	100	72.925	Panthera_tigris_altaica
ENSAMXG00000016812	stau1	99	65.870	ENSPTRG00000023130	STAU1	100	75.749	Pan_troglodytes
ENSAMXG00000016812	stau1	99	70.711	ENSPANG00000020560	STAU1	100	69.000	Papio_anubis
ENSAMXG00000016812	stau1	99	81.423	ENSPKIG00000024588	stau1	82	82.411	Paramormyrops_kingsleyae
ENSAMXG00000016812	stau1	99	76.923	ENSPSIG00000010731	STAU1	74	76.923	Pelodiscus_sinensis
ENSAMXG00000016812	stau1	99	77.148	ENSPMGG00000018553	stau1	100	77.686	Periophthalmus_magnuspinnatus
ENSAMXG00000016812	stau1	84	69.076	ENSPEMG00000022045	Stau1	100	69.076	Peromyscus_maniculatus_bairdii
ENSAMXG00000016812	stau1	99	75.586	ENSPCIG00000023269	STAU1	100	72.617	Phascolarctos_cinereus
ENSAMXG00000016812	stau1	98	75.092	ENSPFOG00000017253	stau1	87	74.908	Poecilia_formosa
ENSAMXG00000016812	stau1	62	68.937	ENSPLAG00000014829	stau1	91	70.219	Poecilia_latipinna
ENSAMXG00000016812	stau1	93	74.563	ENSPMEG00000007495	stau1	85	74.369	Poecilia_mexicana
ENSAMXG00000016812	stau1	98	74.354	ENSPREG00000003477	stau1	87	74.170	Poecilia_reticulata
ENSAMXG00000016812	stau1	99	70.537	ENSPPYG00000011111	STAU1	95	72.051	Pongo_abelii
ENSAMXG00000016812	stau1	93	64.945	ENSPCAG00000002459	STAU1	95	67.054	Procavia_capensis
ENSAMXG00000016812	stau1	99	69.671	ENSPCOG00000027746	STAU1	100	72.079	Propithecus_coquereli
ENSAMXG00000016812	stau1	86	74.754	ENSPVAG00000015019	STAU1	81	74.754	Pteropus_vampyrus
ENSAMXG00000016812	stau1	98	80.502	ENSPNYG00000014436	stau1	96	80.502	Pundamilia_nyererei
ENSAMXG00000016812	stau1	98	88.825	ENSPNAG00000011323	stau1	93	89.403	Pygocentrus_nattereri
ENSAMXG00000016812	stau1	84	68.474	ENSRNOG00000007781	Stau1	100	68.474	Rattus_norvegicus
ENSAMXG00000016812	stau1	86	73.267	ENSRBIG00000037345	STAU1	100	73.547	Rhinopithecus_bieti
ENSAMXG00000016812	stau1	99	70.711	ENSRROG00000039008	STAU1	100	73.307	Rhinopithecus_roxellana
ENSAMXG00000016812	stau1	99	69.811	ENSSBOG00000034448	STAU1	100	71.805	Saimiri_boliviensis_boliviensis
ENSAMXG00000016812	stau1	99	72.862	ENSSHAG00000009492	STAU1	98	72.117	Sarcophilus_harrisii
ENSAMXG00000016812	stau1	98	81.548	ENSSFOG00015021497	stau1	99	76.599	Scleropages_formosus
ENSAMXG00000016812	stau1	98	78.879	ENSSMAG00000017410	stau1	89	78.879	Scophthalmus_maximus
ENSAMXG00000016812	stau1	98	80.827	ENSSDUG00000019439	stau1	96	80.827	Seriola_dumerili
ENSAMXG00000016812	stau1	98	80.827	ENSSLDG00000025040	stau1	96	80.827	Seriola_lalandi_dorsalis
ENSAMXG00000016812	stau1	63	73.152	ENSSARG00000010389	-	63	73.152	Sorex_araneus
ENSAMXG00000016812	stau1	99	75.475	ENSSPUG00000017983	STAU1	78	75.670	Sphenodon_punctatus
ENSAMXG00000016812	stau1	98	80.451	ENSSPAG00000019275	stau1	96	80.451	Stegastes_partitus
ENSAMXG00000016812	stau1	99	73.438	ENSSSCG00000027444	STAU1	100	73.347	Sus_scrofa
ENSAMXG00000016812	stau1	89	75.143	ENSTGUG00000008784	STAU1	73	75.143	Taeniopygia_guttata
ENSAMXG00000016812	stau1	98	74.864	ENSTRUG00000005837	stau1	96	76.044	Takifugu_rubripes
ENSAMXG00000016812	stau1	95	78.711	ENSTNIG00000014732	stau1	81	78.711	Tetraodon_nigroviridis
ENSAMXG00000016812	stau1	99	60.794	ENSTBEG00000009404	STAU1	95	62.613	Tupaia_belangeri
ENSAMXG00000016812	stau1	99	63.258	ENSTTRG00000004285	STAU1	95	65.154	Tursiops_truncatus
ENSAMXG00000016812	stau1	86	72.530	ENSUAMG00000025449	STAU1	100	72.134	Ursus_americanus
ENSAMXG00000016812	stau1	64	71.240	ENSUMAG00000024475	STAU1	89	70.712	Ursus_maritimus
ENSAMXG00000016812	stau1	99	70.191	ENSVPAG00000001313	STAU1	95	72.414	Vicugna_pacos
ENSAMXG00000016812	stau1	99	70.275	ENSVVUG00000022325	STAU1	94	69.287	Vulpes_vulpes
ENSAMXG00000016812	stau1	88	73.438	ENSXETG00000001783	stau1	73	73.633	Xenopus_tropicalis
ENSAMXG00000016812	stau1	59	67.552	ENSXCOG00000008804	stau1	83	66.006	Xiphophorus_couchianus
ENSAMXG00000016812	stau1	98	78.782	ENSXMAG00000016175	stau1	85	78.782	Xiphophorus_maculatus