EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016817 (Gene tree)
Gene ID: 103025892
Gene Symbol: tsr2
Alias: chunp6926|dt1p1a10l|un-named hi1116a|unm hi1116a|zgc:109784
Full Name: TSR2%2C ribosome maturation factor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8341 bases
Position: chr6:52125817-52134157
Accession: 103025892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017314	WGG	PF10273.9	2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017314	-	985	XM_007245819	ENSAMXP00000017314	214 (aa)	XP_007245881	W5LBV2

Gene Model

Click here to download ENSAMXG00000016817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016817	tsr2	89	46.632	ENSG00000158526	TSR2	100	49.223	Homo_sapiens
ENSAMXG00000016817	tsr2	82	52.571	ENSAPOG00000004150	-	95	52.000	Acanthochromis_polyacanthus
ENSAMXG00000016817	tsr2	89	49.479	ENSAMEG00000002469	TSR2	100	49.479	Ailuropoda_melanoleuca
ENSAMXG00000016817	tsr2	64	63.043	ENSACIG00000004880	tsr2	86	66.400	Amphilophus_citrinellus
ENSAMXG00000016817	tsr2	92	55.612	ENSAOCG00000015893	tsr2	100	55.612	Amphiprion_ocellaris
ENSAMXG00000016817	tsr2	92	55.612	ENSAPEG00000023549	tsr2	100	56.633	Amphiprion_percula
ENSAMXG00000016817	tsr2	88	60.106	ENSATEG00000019009	-	99	60.106	Anabas_testudineus
ENSAMXG00000016817	tsr2	89	54.211	ENSACAG00000012270	TSR2	100	55.497	Anolis_carolinensis
ENSAMXG00000016817	tsr2	89	49.741	ENSANAG00000000062	TSR2	100	49.741	Aotus_nancymaae
ENSAMXG00000016817	tsr2	88	57.447	ENSACLG00000014269	tsr2	99	57.447	Astatotilapia_calliptera
ENSAMXG00000016817	tsr2	82	40.000	ENSBTAG00000018311	-	61	47.321	Bos_taurus
ENSAMXG00000016817	tsr2	89	50.777	ENSBTAG00000015858	TSR2	99	48.187	Bos_taurus
ENSAMXG00000016817	tsr2	89	50.259	ENSCJAG00000000251	TSR2	100	50.259	Callithrix_jacchus
ENSAMXG00000016817	tsr2	89	50.000	ENSCAFG00000016440	TSR2	100	50.000	Canis_familiaris
ENSAMXG00000016817	tsr2	89	50.000	ENSCAFG00020014044	TSR2	100	50.000	Canis_lupus_dingo
ENSAMXG00000016817	tsr2	84	40.541	ENSCHIG00000009963	-	59	48.673	Capra_hircus
ENSAMXG00000016817	tsr2	82	45.251	ENSTSYG00000031321	-	95	44.693	Carlito_syrichta
ENSAMXG00000016817	tsr2	89	48.187	ENSTSYG00000005670	-	100	47.179	Carlito_syrichta
ENSAMXG00000016817	tsr2	84	45.355	ENSTSYG00000031644	-	99	45.355	Carlito_syrichta
ENSAMXG00000016817	tsr2	89	43.158	ENSCPOG00000033139	TSR2	99	45.263	Cavia_porcellus
ENSAMXG00000016817	tsr2	89	49.741	ENSCCAG00000025421	TSR2	100	49.741	Cebus_capucinus
ENSAMXG00000016817	tsr2	89	46.632	ENSCATG00000036868	-	100	49.223	Cercocebus_atys
ENSAMXG00000016817	tsr2	89	44.041	ENSCATG00000045152	-	99	47.150	Cercocebus_atys
ENSAMXG00000016817	tsr2	89	46.316	ENSCLAG00000007235	TSR2	99	45.771	Chinchilla_lanigera
ENSAMXG00000016817	tsr2	89	44.041	ENSCSAG00000000402	-	100	47.150	Chlorocebus_sabaeus
ENSAMXG00000016817	tsr2	86	43.850	ENSCSAG00000012366	-	97	46.524	Chlorocebus_sabaeus
ENSAMXG00000016817	tsr2	89	49.223	ENSCHOG00000001068	TSR2	100	49.223	Choloepus_hoffmanni
ENSAMXG00000016817	tsr2	88	31.443	ENSCING00000002386	-	98	32.143	Ciona_intestinalis
ENSAMXG00000016817	tsr2	89	47.150	ENSCANG00000043156	-	100	49.741	Colobus_angolensis_palliatus
ENSAMXG00000016817	tsr2	76	41.566	ENSCANG00000036773	-	88	41.566	Colobus_angolensis_palliatus
ENSAMXG00000016817	tsr2	89	46.114	ENSCGRG00001023321	Tsr2	99	46.114	Cricetulus_griseus_chok1gshd
ENSAMXG00000016817	tsr2	89	47.449	ENSCGRG00000010855	Tsr2	99	48.980	Cricetulus_griseus_crigri
ENSAMXG00000016817	tsr2	89	52.577	ENSCSEG00000017003	tsr2	100	54.124	Cynoglossus_semilaevis
ENSAMXG00000016817	tsr2	88	54.255	ENSCVAG00000001845	tsr2	99	57.979	Cyprinodon_variegatus
ENSAMXG00000016817	tsr2	89	69.110	ENSDARG00000005772	tsr2	99	77.686	Danio_rerio
ENSAMXG00000016817	tsr2	89	48.187	ENSDORG00000025574	Tsr2	99	48.187	Dipodomys_ordii
ENSAMXG00000016817	tsr2	89	48.969	ENSETEG00000018510	TSR2	100	48.969	Echinops_telfairi
ENSAMXG00000016817	tsr2	87	46.774	ENSEBUG00000012895	tsr2	95	46.774	Eptatretus_burgeri
ENSAMXG00000016817	tsr2	89	49.223	ENSEASG00005013005	TSR2	99	47.150	Equus_asinus_asinus
ENSAMXG00000016817	tsr2	92	48.744	ENSECAG00000029844	TSR2	89	46.734	Equus_caballus
ENSAMXG00000016817	tsr2	85	61.538	ENSELUG00000007768	tsr2	96	61.538	Esox_lucius
ENSAMXG00000016817	tsr2	89	51.531	ENSFCAG00000002226	TSR2	100	51.531	Felis_catus
ENSAMXG00000016817	tsr2	89	48.187	ENSFDAG00000011554	TSR2	99	46.632	Fukomys_damarensis
ENSAMXG00000016817	tsr2	88	53.723	ENSGACG00000000595	tsr2	99	55.851	Gasterosteus_aculeatus
ENSAMXG00000016817	tsr2	58	53.077	ENSGAGG00000007629	TSR2	63	56.522	Gopherus_agassizii
ENSAMXG00000016817	tsr2	89	46.632	ENSGGOG00000041368	TSR2	100	49.223	Gorilla_gorilla
ENSAMXG00000016817	tsr2	92	56.566	ENSHBUG00000020989	tsr2	84	56.566	Haplochromis_burtoni
ENSAMXG00000016817	tsr2	89	47.917	ENSHGLG00000002188	TSR2	99	47.917	Heterocephalus_glaber_female
ENSAMXG00000016817	tsr2	89	47.917	ENSHGLG00100001234	TSR2	99	47.917	Heterocephalus_glaber_male
ENSAMXG00000016817	tsr2	64	57.971	ENSHCOG00000017585	-	59	60.800	Hippocampus_comes
ENSAMXG00000016817	tsr2	89	75.258	ENSIPUG00000012170	tsr2	100	75.258	Ictalurus_punctatus
ENSAMXG00000016817	tsr2	89	51.031	ENSSTOG00000033612	TSR2	99	51.031	Ictidomys_tridecemlineatus
ENSAMXG00000016817	tsr2	89	46.907	ENSJJAG00000004561	Tsr2	99	46.907	Jaculus_jaculus
ENSAMXG00000016817	tsr2	88	56.915	ENSKMAG00000012611	-	99	57.979	Kryptolebias_marmoratus
ENSAMXG00000016817	tsr2	58	68.000	ENSLBEG00000017316	tsr2	51	68.000	Labrus_bergylta
ENSAMXG00000016817	tsr2	89	51.813	ENSLAFG00000018093	TSR2	99	51.813	Loxodonta_africana
ENSAMXG00000016817	tsr2	89	46.632	ENSMFAG00000001364	TSR2	100	49.223	Macaca_fascicularis
ENSAMXG00000016817	tsr2	89	46.632	ENSMMUG00000012612	TSR2	100	49.223	Macaca_mulatta
ENSAMXG00000016817	tsr2	89	43.523	ENSMMUG00000010044	-	100	46.632	Macaca_mulatta
ENSAMXG00000016817	tsr2	89	46.632	ENSMNEG00000041996	TSR2	100	49.223	Macaca_nemestrina
ENSAMXG00000016817	tsr2	89	46.632	ENSMLEG00000032632	TSR2	100	49.223	Mandrillus_leucophaeus
ENSAMXG00000016817	tsr2	88	56.915	ENSMAMG00000011540	tsr2	99	57.447	Mastacembelus_armatus
ENSAMXG00000016817	tsr2	88	57.447	ENSMZEG00005026752	tsr2	99	57.447	Maylandia_zebra
ENSAMXG00000016817	tsr2	89	47.959	ENSMAUG00000012389	Tsr2	99	50.000	Mesocricetus_auratus
ENSAMXG00000016817	tsr2	89	50.769	ENSMICG00000010116	TSR2	99	47.150	Microcebus_murinus
ENSAMXG00000016817	tsr2	89	48.705	ENSMOCG00000006662	Tsr2	99	46.114	Microtus_ochrogaster
ENSAMXG00000016817	tsr2	88	47.340	ENSMMOG00000009751	-	99	47.340	Mola_mola
ENSAMXG00000016817	tsr2	89	39.086	ENSMODG00000020894	-	100	39.086	Monodelphis_domestica
ENSAMXG00000016817	tsr2	88	55.851	ENSMALG00000014552	tsr2	99	55.851	Monopterus_albus
ENSAMXG00000016817	tsr2	89	48.469	MGP_CAROLIEiJ_G0033491	Tsr2	99	47.959	Mus_caroli
ENSAMXG00000016817	tsr2	89	48.469	ENSMUSG00000025264	Tsr2	99	47.959	Mus_musculus
ENSAMXG00000016817	tsr2	89	47.959	MGP_PahariEiJ_G0032030	Tsr2	99	47.449	Mus_pahari
ENSAMXG00000016817	tsr2	89	48.469	MGP_SPRETEiJ_G0034661	Tsr2	99	47.959	Mus_spretus
ENSAMXG00000016817	tsr2	89	51.020	ENSMPUG00000011436	TSR2	100	51.020	Mustela_putorius_furo
ENSAMXG00000016817	tsr2	84	48.087	ENSMLUG00000010613	TSR2	95	48.087	Myotis_lucifugus
ENSAMXG00000016817	tsr2	89	48.705	ENSNGAG00000021351	Tsr2	99	48.705	Nannospalax_galili
ENSAMXG00000016817	tsr2	88	57.979	ENSNBRG00000007965	tsr2	99	57.979	Neolamprologus_brichardi
ENSAMXG00000016817	tsr2	89	46.632	ENSNLEG00000030041	TSR2	100	49.223	Nomascus_leucogenys
ENSAMXG00000016817	tsr2	52	47.748	ENSMEUG00000006729	-	78	51.546	Notamacropus_eugenii
ENSAMXG00000016817	tsr2	54	52.174	ENSOPRG00000016595	TSR2	85	51.818	Ochotona_princeps
ENSAMXG00000016817	tsr2	89	49.479	ENSODEG00000000542	-	99	47.692	Octodon_degus
ENSAMXG00000016817	tsr2	84	49.189	ENSODEG00000014931	-	98	45.550	Octodon_degus
ENSAMXG00000016817	tsr2	82	46.111	ENSODEG00000019951	-	100	43.316	Octodon_degus
ENSAMXG00000016817	tsr2	88	57.447	ENSONIG00000000763	tsr2	99	57.447	Oreochromis_niloticus
ENSAMXG00000016817	tsr2	63	57.463	ENSOANG00000000707	TSR2	90	58.462	Ornithorhynchus_anatinus
ENSAMXG00000016817	tsr2	77	48.810	ENSOCUG00000014714	-	100	48.810	Oryctolagus_cuniculus
ENSAMXG00000016817	tsr2	89	50.259	ENSOCUG00000027678	-	100	50.259	Oryctolagus_cuniculus
ENSAMXG00000016817	tsr2	89	53.684	ENSORLG00000022662	tsr2	100	54.737	Oryzias_latipes
ENSAMXG00000016817	tsr2	89	53.684	ENSORLG00020003033	tsr2	100	54.211	Oryzias_latipes_hni
ENSAMXG00000016817	tsr2	89	54.211	ENSORLG00015017253	tsr2	100	55.263	Oryzias_latipes_hsok
ENSAMXG00000016817	tsr2	88	52.660	ENSOMEG00000013975	-	99	54.255	Oryzias_melastigma
ENSAMXG00000016817	tsr2	88	54.255	ENSOMEG00000011483	tsr2	99	54.255	Oryzias_melastigma
ENSAMXG00000016817	tsr2	89	47.668	ENSOGAG00000003468	TSR2	100	45.596	Otolemur_garnettii
ENSAMXG00000016817	tsr2	89	50.777	ENSOARG00000006467	-	99	48.187	Ovis_aries
ENSAMXG00000016817	tsr2	81	39.773	ENSOARG00000009487	-	65	46.903	Ovis_aries
ENSAMXG00000016817	tsr2	89	46.632	ENSPPAG00000021242	TSR2	100	49.223	Pan_paniscus
ENSAMXG00000016817	tsr2	89	51.531	ENSPPRG00000001337	TSR2	100	51.531	Panthera_pardus
ENSAMXG00000016817	tsr2	89	51.531	ENSPTIG00000007138	TSR2	99	51.531	Panthera_tigris_altaica
ENSAMXG00000016817	tsr2	89	46.632	ENSPTRG00000045904	TSR2	100	49.223	Pan_troglodytes
ENSAMXG00000016817	tsr2	89	46.632	ENSPANG00000008042	-	100	49.223	Papio_anubis
ENSAMXG00000016817	tsr2	84	44.262	ENSPANG00000002291	-	98	47.541	Papio_anubis
ENSAMXG00000016817	tsr2	89	55.789	ENSPKIG00000023676	tsr2	100	58.462	Paramormyrops_kingsleyae
ENSAMXG00000016817	tsr2	89	53.684	ENSPMGG00000002963	tsr2	100	53.684	Periophthalmus_magnuspinnatus
ENSAMXG00000016817	tsr2	89	48.205	ENSPEMG00000015713	Tsr2	99	46.114	Peromyscus_maniculatus_bairdii
ENSAMXG00000016817	tsr2	85	43.784	ENSPMAG00000001705	tsr2	92	43.784	Petromyzon_marinus
ENSAMXG00000016817	tsr2	93	40.187	ENSPCIG00000024314	-	96	40.976	Phascolarctos_cinereus
ENSAMXG00000016817	tsr2	88	54.124	ENSPFOG00000011824	tsr2	99	54.124	Poecilia_formosa
ENSAMXG00000016817	tsr2	88	55.263	ENSPLAG00000023520	tsr2	99	55.263	Poecilia_latipinna
ENSAMXG00000016817	tsr2	88	55.319	ENSPMEG00000000360	tsr2	99	53.723	Poecilia_mexicana
ENSAMXG00000016817	tsr2	88	55.789	ENSPREG00000013009	tsr2	99	55.789	Poecilia_reticulata
ENSAMXG00000016817	tsr2	90	46.429	ENSPPYG00000020381	-	73	46.429	Pongo_abelii
ENSAMXG00000016817	tsr2	89	50.256	ENSPCOG00000002354	TSR2	100	48.187	Propithecus_coquereli
ENSAMXG00000016817	tsr2	57	52.459	ENSPVAG00000000034	TSR2	89	51.852	Pteropus_vampyrus
ENSAMXG00000016817	tsr2	92	56.566	ENSPNYG00000019995	tsr2	84	56.566	Pundamilia_nyererei
ENSAMXG00000016817	tsr2	89	82.105	ENSPNAG00000024167	tsr2	100	82.105	Pygocentrus_nattereri
ENSAMXG00000016817	tsr2	89	50.256	ENSRNOG00000002556	NEWGENE_1562416	99	46.632	Rattus_norvegicus
ENSAMXG00000016817	tsr2	90	41.837	ENSRBIG00000003999	-	91	41.837	Rhinopithecus_bieti
ENSAMXG00000016817	tsr2	89	46.632	ENSRBIG00000024521	-	100	49.223	Rhinopithecus_bieti
ENSAMXG00000016817	tsr2	89	41.753	ENSRROG00000033469	-	93	41.753	Rhinopithecus_roxellana
ENSAMXG00000016817	tsr2	89	46.632	ENSRROG00000029439	-	100	49.223	Rhinopithecus_roxellana
ENSAMXG00000016817	tsr2	89	49.741	ENSSBOG00000019737	TSR2	100	49.741	Saimiri_boliviensis_boliviensis
ENSAMXG00000016817	tsr2	77	42.424	ENSSHAG00000004824	-	100	42.424	Sarcophilus_harrisii
ENSAMXG00000016817	tsr2	89	60.209	ENSSFOG00015002207	tsr2	100	62.887	Scleropages_formosus
ENSAMXG00000016817	tsr2	88	56.614	ENSSMAG00000012882	tsr2	99	56.614	Scophthalmus_maximus
ENSAMXG00000016817	tsr2	88	56.915	ENSSDUG00000019445	tsr2	99	60.106	Seriola_dumerili
ENSAMXG00000016817	tsr2	88	59.043	ENSSLDG00000005598	tsr2	99	59.043	Seriola_lalandi_dorsalis
ENSAMXG00000016817	tsr2	89	51.309	ENSSPUG00000019286	TSR2	100	53.927	Sphenodon_punctatus
ENSAMXG00000016817	tsr2	89	48.168	ENSSSCG00000012334	TSR2	100	48.168	Sus_scrofa
ENSAMXG00000016817	tsr2	88	51.596	ENSTRUG00000008947	tsr2	99	51.596	Takifugu_rubripes
ENSAMXG00000016817	tsr2	80	49.419	ENSTNIG00000002173	-	100	51.744	Tetraodon_nigroviridis
ENSAMXG00000016817	tsr2	61	51.908	ENSTBEG00000016242	TSR2	88	51.908	Tupaia_belangeri
ENSAMXG00000016817	tsr2	89	39.175	ENSTTRG00000003274	TSR2	100	36.458	Tursiops_truncatus
ENSAMXG00000016817	tsr2	89	50.000	ENSUAMG00000009605	TSR2	100	50.000	Ursus_americanus
ENSAMXG00000016817	tsr2	89	50.000	ENSUMAG00000019189	TSR2	100	50.000	Ursus_maritimus
ENSAMXG00000016817	tsr2	84	42.308	ENSVPAG00000007532	TSR2	100	42.308	Vicugna_pacos
ENSAMXG00000016817	tsr2	90	47.500	ENSVVUG00000002247	TSR2	100	47.500	Vulpes_vulpes
ENSAMXG00000016817	tsr2	89	53.061	ENSXETG00000033574	TSR2	100	53.061	Xenopus_tropicalis
ENSAMXG00000016817	tsr2	89	55.440	ENSXMAG00000024827	tsr2	91	55.440	Xiphophorus_maculatus