EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000016855 (Gene tree)
Gene ID: 103023333
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7868 bases
Position: chrAPWO02000110.1:235123-242990
Accession: 103023333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017369	SF3a60_bindingd	PF12108.8	2.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017369	-	1740	XM_007238679	ENSAMXP00000017369	579 (aa)	XP_007238741	W5LC07

Gene Model

Click here to download ENSAMXG00000016855's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000016855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000016855	sf3a3	87	91.617	ENSG00000183431	SF3A3	100	91.617	Homo_sapiens
ENSAMXG00000016855	sf3a3	87	93.812	ENSAPOG00000015608	sf3a3	100	93.812	Acanthochromis_polyacanthus
ENSAMXG00000016855	sf3a3	87	91.617	ENSAMEG00000001262	SF3A3	100	91.617	Ailuropoda_melanoleuca
ENSAMXG00000016855	sf3a3	82	88.560	ENSACIG00000009061	sf3a3	99	88.560	Amphilophus_citrinellus
ENSAMXG00000016855	sf3a3	87	94.411	ENSAOCG00000013954	sf3a3	100	94.411	Amphiprion_ocellaris
ENSAMXG00000016855	sf3a3	87	94.411	ENSAPEG00000007297	sf3a3	100	94.411	Amphiprion_percula
ENSAMXG00000016855	sf3a3	87	95.010	ENSATEG00000008754	sf3a3	100	95.010	Anabas_testudineus
ENSAMXG00000016855	sf3a3	81	92.537	ENSAPLG00000014900	SF3A3	100	92.537	Anas_platyrhynchos
ENSAMXG00000016855	sf3a3	87	91.018	ENSACAG00000017058	SF3A3	100	91.018	Anolis_carolinensis
ENSAMXG00000016855	sf3a3	87	71.257	ENSANAG00000036903	-	100	71.257	Aotus_nancymaae
ENSAMXG00000016855	sf3a3	86	88.755	ENSANAG00000014878	SF3A3	100	88.755	Aotus_nancymaae
ENSAMXG00000016855	sf3a3	87	94.411	ENSACLG00000017977	sf3a3	100	94.411	Astatotilapia_calliptera
ENSAMXG00000016855	sf3a3	87	91.617	ENSBTAG00000007299	SF3A3	100	91.617	Bos_taurus
ENSAMXG00000016855	sf3a3	87	51.491	WBGene00011758	T13H5.4	100	51.491	Caenorhabditis_elegans
ENSAMXG00000016855	sf3a3	87	91.617	ENSCJAG00000002176	SF3A3	100	91.617	Callithrix_jacchus
ENSAMXG00000016855	sf3a3	87	91.617	ENSCAFG00000003222	-	100	91.617	Canis_familiaris
ENSAMXG00000016855	sf3a3	87	91.617	ENSCAFG00000000683	-	100	91.617	Canis_familiaris
ENSAMXG00000016855	sf3a3	87	91.617	ENSCAFG00020006186	SF3A3	100	91.617	Canis_lupus_dingo
ENSAMXG00000016855	sf3a3	87	91.617	ENSCHIG00000020638	SF3A3	100	91.617	Capra_hircus
ENSAMXG00000016855	sf3a3	87	85.429	ENSTSYG00000008417	SF3A3	100	85.429	Carlito_syrichta
ENSAMXG00000016855	sf3a3	74	59.497	ENSCAPG00000003466	SF3A3	100	57.208	Cavia_aperea
ENSAMXG00000016855	sf3a3	87	91.816	ENSCPOG00000008660	SF3A3	100	91.816	Cavia_porcellus
ENSAMXG00000016855	sf3a3	87	91.617	ENSCCAG00000033732	SF3A3	100	91.617	Cebus_capucinus
ENSAMXG00000016855	sf3a3	87	65.469	ENSCCAG00000034048	-	100	63.221	Cebus_capucinus
ENSAMXG00000016855	sf3a3	81	73.561	ENSCATG00000041660	-	100	75.053	Cercocebus_atys
ENSAMXG00000016855	sf3a3	87	68.526	ENSCATG00000043537	-	100	68.924	Cercocebus_atys
ENSAMXG00000016855	sf3a3	87	91.617	ENSCATG00000043496	SF3A3	100	91.617	Cercocebus_atys
ENSAMXG00000016855	sf3a3	87	91.617	ENSCLAG00000010838	SF3A3	100	91.617	Chinchilla_lanigera
ENSAMXG00000016855	sf3a3	82	91.176	ENSCSAG00000001120	SF3A3	100	91.176	Chlorocebus_sabaeus
ENSAMXG00000016855	sf3a3	69	86.243	ENSCHOG00000006849	SF3A3	80	86.243	Choloepus_hoffmanni
ENSAMXG00000016855	sf3a3	87	83.433	ENSCPBG00000018291	-	100	83.433	Chrysemys_picta_bellii
ENSAMXG00000016855	sf3a3	61	63.712	ENSCPBG00000007472	-	95	63.536	Chrysemys_picta_bellii
ENSAMXG00000016855	sf3a3	87	68.725	ENSCING00000002730	-	100	68.725	Ciona_intestinalis
ENSAMXG00000016855	sf3a3	87	67.864	ENSCSAVG00000005063	-	100	67.864	Ciona_savignyi
ENSAMXG00000016855	sf3a3	87	65.269	ENSCANG00000035535	-	100	65.269	Colobus_angolensis_palliatus
ENSAMXG00000016855	sf3a3	87	91.617	ENSCANG00000042083	SF3A3	100	91.617	Colobus_angolensis_palliatus
ENSAMXG00000016855	sf3a3	87	91.417	ENSCGRG00001011320	Sf3a3	100	91.417	Cricetulus_griseus_chok1gshd
ENSAMXG00000016855	sf3a3	87	91.417	ENSCGRG00000012156	Sf3a3	100	91.417	Cricetulus_griseus_crigri
ENSAMXG00000016855	sf3a3	87	93.413	ENSCSEG00000010401	sf3a3	100	93.413	Cynoglossus_semilaevis
ENSAMXG00000016855	sf3a3	81	92.537	ENSCVAG00000010239	sf3a3	95	92.537	Cyprinodon_variegatus
ENSAMXG00000016855	sf3a3	87	94.411	ENSDARG00000100114	sf3a3	100	95.704	Danio_rerio
ENSAMXG00000016855	sf3a3	79	91.247	ENSDNOG00000046628	SF3A3	99	91.247	Dasypus_novemcinctus
ENSAMXG00000016855	sf3a3	87	91.816	ENSDORG00000008798	Sf3a3	100	91.816	Dipodomys_ordii
ENSAMXG00000016855	sf3a3	87	64.427	FBgn0014366	noi	100	64.229	Drosophila_melanogaster
ENSAMXG00000016855	sf3a3	94	73.761	ENSEBUG00000015411	sf3a3	98	74.128	Eptatretus_burgeri
ENSAMXG00000016855	sf3a3	87	91.617	ENSEASG00005012906	SF3A3	100	91.617	Equus_asinus_asinus
ENSAMXG00000016855	sf3a3	87	91.617	ENSECAG00000017333	SF3A3	100	91.617	Equus_caballus
ENSAMXG00000016855	sf3a3	87	92.415	ENSELUG00000010024	sf3a3	100	92.415	Esox_lucius
ENSAMXG00000016855	sf3a3	87	91.617	ENSFCAG00000027772	SF3A3	100	91.617	Felis_catus
ENSAMXG00000016855	sf3a3	87	91.816	ENSFALG00000001003	SF3A3	100	91.816	Ficedula_albicollis
ENSAMXG00000016855	sf3a3	87	91.816	ENSFDAG00000020908	SF3A3	100	91.816	Fukomys_damarensis
ENSAMXG00000016855	sf3a3	87	93.214	ENSFHEG00000019107	sf3a3	100	93.214	Fundulus_heteroclitus
ENSAMXG00000016855	sf3a3	87	93.812	ENSGMOG00000015540	sf3a3	100	93.812	Gadus_morhua
ENSAMXG00000016855	sf3a3	87	91.617	ENSGALG00000001540	SF3A3	100	91.617	Gallus_gallus
ENSAMXG00000016855	sf3a3	87	93.613	ENSGAFG00000002320	sf3a3	100	93.613	Gambusia_affinis
ENSAMXG00000016855	sf3a3	87	95.010	ENSGACG00000007842	sf3a3	100	95.010	Gasterosteus_aculeatus
ENSAMXG00000016855	sf3a3	87	91.218	ENSGAGG00000014980	SF3A3	100	91.218	Gopherus_agassizii
ENSAMXG00000016855	sf3a3	87	91.617	ENSGGOG00000013928	SF3A3	100	91.617	Gorilla_gorilla
ENSAMXG00000016855	sf3a3	87	71.457	ENSGGOG00000022611	-	100	70.858	Gorilla_gorilla
ENSAMXG00000016855	sf3a3	87	94.411	ENSHBUG00000018158	sf3a3	100	94.956	Haplochromis_burtoni
ENSAMXG00000016855	sf3a3	87	91.816	ENSHGLG00000012502	SF3A3	100	91.816	Heterocephalus_glaber_female
ENSAMXG00000016855	sf3a3	87	91.816	ENSHGLG00100010546	SF3A3	100	91.816	Heterocephalus_glaber_male
ENSAMXG00000016855	sf3a3	87	91.816	ENSHCOG00000015109	sf3a3	100	91.816	Hippocampus_comes
ENSAMXG00000016855	sf3a3	87	96.008	ENSIPUG00000011603	sf3a3	100	96.008	Ictalurus_punctatus
ENSAMXG00000016855	sf3a3	87	91.617	ENSSTOG00000001691	SF3A3	100	91.617	Ictidomys_tridecemlineatus
ENSAMXG00000016855	sf3a3	87	91.617	ENSJJAG00000012404	Sf3a3	100	91.617	Jaculus_jaculus
ENSAMXG00000016855	sf3a3	87	93.613	ENSKMAG00000007632	sf3a3	100	93.613	Kryptolebias_marmoratus
ENSAMXG00000016855	sf3a3	87	85.857	ENSLBEG00000000816	sf3a3	100	85.857	Labrus_bergylta
ENSAMXG00000016855	sf3a3	87	94.411	ENSLOCG00000003273	sf3a3	100	94.411	Lepisosteus_oculatus
ENSAMXG00000016855	sf3a3	87	80.439	ENSLAFG00000008094	SF3A3	100	80.439	Loxodonta_africana
ENSAMXG00000016855	sf3a3	81	73.134	ENSMFAG00000036706	-	100	74.840	Macaca_fascicularis
ENSAMXG00000016855	sf3a3	87	91.617	ENSMFAG00000043047	SF3A3	100	91.617	Macaca_fascicularis
ENSAMXG00000016855	sf3a3	87	71.116	ENSMMUG00000038820	-	100	72.709	Macaca_mulatta
ENSAMXG00000016855	sf3a3	87	91.617	ENSMMUG00000023199	SF3A3	100	91.617	Macaca_mulatta
ENSAMXG00000016855	sf3a3	81	71.429	ENSMNEG00000028686	-	100	73.134	Macaca_nemestrina
ENSAMXG00000016855	sf3a3	87	91.617	ENSMNEG00000044291	SF3A3	100	91.617	Macaca_nemestrina
ENSAMXG00000016855	sf3a3	87	67.530	ENSMLEG00000028631	-	100	67.928	Mandrillus_leucophaeus
ENSAMXG00000016855	sf3a3	87	91.617	ENSMLEG00000030641	SF3A3	100	91.617	Mandrillus_leucophaeus
ENSAMXG00000016855	sf3a3	87	75.250	ENSMLEG00000036714	-	100	76.647	Mandrillus_leucophaeus
ENSAMXG00000016855	sf3a3	87	94.611	ENSMAMG00000001942	sf3a3	100	94.611	Mastacembelus_armatus
ENSAMXG00000016855	sf3a3	87	94.411	ENSMZEG00005016987	sf3a3	100	94.411	Maylandia_zebra
ENSAMXG00000016855	sf3a3	87	86.879	ENSMGAG00000002875	SF3A3	100	86.879	Meleagris_gallopavo
ENSAMXG00000016855	sf3a3	87	85.828	ENSMICG00000043548	-	100	85.828	Microcebus_murinus
ENSAMXG00000016855	sf3a3	79	88.865	ENSMICG00000026541	-	100	88.865	Microcebus_murinus
ENSAMXG00000016855	sf3a3	87	87.026	ENSMICG00000001485	-	100	87.026	Microcebus_murinus
ENSAMXG00000016855	sf3a3	87	88.024	ENSMOCG00000019939	-	100	88.024	Microtus_ochrogaster
ENSAMXG00000016855	sf3a3	82	85.474	ENSMOCG00000014565	-	97	84.421	Microtus_ochrogaster
ENSAMXG00000016855	sf3a3	87	93.812	ENSMMOG00000014307	sf3a3	100	93.812	Mola_mola
ENSAMXG00000016855	sf3a3	87	72.427	ENSMODG00000017729	-	100	71.954	Monodelphis_domestica
ENSAMXG00000016855	sf3a3	87	84.431	ENSMODG00000024045	-	100	84.431	Monodelphis_domestica
ENSAMXG00000016855	sf3a3	87	93.812	ENSMALG00000004836	sf3a3	100	94.518	Monopterus_albus
ENSAMXG00000016855	sf3a3	87	91.417	MGP_CAROLIEiJ_G0026449	Sf3a3	100	91.417	Mus_caroli
ENSAMXG00000016855	sf3a3	87	91.417	ENSMUSG00000028902	Sf3a3	100	91.417	Mus_musculus
ENSAMXG00000016855	sf3a3	87	86.028	MGP_PahariEiJ_G0028780	Sf3a3	100	86.028	Mus_pahari
ENSAMXG00000016855	sf3a3	87	91.417	MGP_SPRETEiJ_G0027428	Sf3a3	100	91.417	Mus_spretus
ENSAMXG00000016855	sf3a3	87	91.218	ENSMLUG00000000991	SF3A3	100	91.218	Myotis_lucifugus
ENSAMXG00000016855	sf3a3	87	85.629	ENSNGAG00000018032	Sf3a3	100	85.629	Nannospalax_galili
ENSAMXG00000016855	sf3a3	87	83.433	ENSNLEG00000011720	SF3A3	100	83.433	Nomascus_leucogenys
ENSAMXG00000016855	sf3a3	87	91.816	ENSOPRG00000012785	SF3A3	100	91.816	Ochotona_princeps
ENSAMXG00000016855	sf3a3	87	88.423	ENSODEG00000006854	-	100	88.423	Octodon_degus
ENSAMXG00000016855	sf3a3	87	80.439	ENSODEG00000018393	-	100	80.240	Octodon_degus
ENSAMXG00000016855	sf3a3	87	77.490	ENSODEG00000000937	-	100	79.880	Octodon_degus
ENSAMXG00000016855	sf3a3	87	87.026	ENSODEG00000007470	-	100	87.026	Octodon_degus
ENSAMXG00000016855	sf3a3	75	95.632	ENSONIG00000010296	sf3a3	100	95.632	Oreochromis_niloticus
ENSAMXG00000016855	sf3a3	81	91.898	ENSOANG00000002473	SF3A3	100	91.898	Ornithorhynchus_anatinus
ENSAMXG00000016855	sf3a3	87	91.816	ENSOCUG00000005407	SF3A3	100	91.816	Oryctolagus_cuniculus
ENSAMXG00000016855	sf3a3	87	92.415	ENSORLG00000008175	sf3a3	100	92.415	Oryzias_latipes
ENSAMXG00000016855	sf3a3	87	92.216	ENSORLG00020013708	sf3a3	100	92.216	Oryzias_latipes_hni
ENSAMXG00000016855	sf3a3	87	92.016	ENSORLG00015004104	sf3a3	100	92.016	Oryzias_latipes_hsok
ENSAMXG00000016855	sf3a3	87	93.014	ENSOMEG00000020177	sf3a3	100	93.014	Oryzias_melastigma
ENSAMXG00000016855	sf3a3	87	91.617	ENSOARG00000019950	SF3A3	100	91.617	Ovis_aries
ENSAMXG00000016855	sf3a3	87	70.858	ENSPPAG00000039955	-	100	70.259	Pan_paniscus
ENSAMXG00000016855	sf3a3	87	91.617	ENSPPAG00000034066	SF3A3	100	91.617	Pan_paniscus
ENSAMXG00000016855	sf3a3	87	91.617	ENSPPRG00000001258	SF3A3	100	91.617	Panthera_pardus
ENSAMXG00000016855	sf3a3	87	91.617	ENSPTIG00000007515	SF3A3	100	91.617	Panthera_tigris_altaica
ENSAMXG00000016855	sf3a3	87	71.457	ENSPTRG00000046013	-	100	70.858	Pan_troglodytes
ENSAMXG00000016855	sf3a3	87	91.617	ENSPTRG00000000559	SF3A3	100	91.617	Pan_troglodytes
ENSAMXG00000016855	sf3a3	87	78.044	ENSPANG00000029393	-	100	79.441	Papio_anubis
ENSAMXG00000016855	sf3a3	75	81.818	ENSPANG00000031214	-	100	67.066	Papio_anubis
ENSAMXG00000016855	sf3a3	87	91.617	ENSPANG00000021859	SF3A3	100	91.617	Papio_anubis
ENSAMXG00000016855	sf3a3	87	94.411	ENSPKIG00000004719	sf3a3	100	94.411	Paramormyrops_kingsleyae
ENSAMXG00000016855	sf3a3	87	89.264	ENSPSIG00000004273	SF3A3	100	89.264	Pelodiscus_sinensis
ENSAMXG00000016855	sf3a3	79	92.998	ENSPMGG00000003610	sf3a3	94	92.998	Periophthalmus_magnuspinnatus
ENSAMXG00000016855	sf3a3	87	91.417	ENSPEMG00000020805	Sf3a3	100	91.417	Peromyscus_maniculatus_bairdii
ENSAMXG00000016855	sf3a3	87	91.617	ENSPCIG00000025719	SF3A3	100	91.617	Phascolarctos_cinereus
ENSAMXG00000016855	sf3a3	87	93.613	ENSPFOG00000005284	sf3a3	100	93.613	Poecilia_formosa
ENSAMXG00000016855	sf3a3	86	90.342	ENSPLAG00000003979	sf3a3	91	91.057	Poecilia_latipinna
ENSAMXG00000016855	sf3a3	68	88.041	ENSPMEG00000021132	sf3a3	88	88.041	Poecilia_mexicana
ENSAMXG00000016855	sf3a3	87	93.413	ENSPREG00000013802	sf3a3	100	93.413	Poecilia_reticulata
ENSAMXG00000016855	sf3a3	87	89.022	ENSPPYG00000001519	SF3A3	100	89.022	Pongo_abelii
ENSAMXG00000016855	sf3a3	87	85.629	ENSPCAG00000010734	SF3A3	100	85.629	Procavia_capensis
ENSAMXG00000016855	sf3a3	87	75.848	ENSPCOG00000017131	-	100	75.848	Propithecus_coquereli
ENSAMXG00000016855	sf3a3	87	80.952	ENSPCOG00000020389	-	100	80.952	Propithecus_coquereli
ENSAMXG00000016855	sf3a3	87	79.840	ENSPVAG00000010158	SF3A3	100	79.840	Pteropus_vampyrus
ENSAMXG00000016855	sf3a3	87	94.411	ENSPNYG00000000786	sf3a3	100	94.411	Pundamilia_nyererei
ENSAMXG00000016855	sf3a3	87	98.403	ENSPNAG00000010298	sf3a3	100	98.403	Pygocentrus_nattereri
ENSAMXG00000016855	sf3a3	87	91.417	ENSRNOG00000007629	Sf3a3	100	91.417	Rattus_norvegicus
ENSAMXG00000016855	sf3a3	87	68.263	ENSRBIG00000041123	-	100	68.263	Rhinopithecus_bieti
ENSAMXG00000016855	sf3a3	87	66.866	ENSRBIG00000043833	-	100	66.866	Rhinopithecus_bieti
ENSAMXG00000016855	sf3a3	87	91.617	ENSRBIG00000043567	SF3A3	100	91.617	Rhinopithecus_bieti
ENSAMXG00000016855	sf3a3	81	72.495	ENSRROG00000032346	-	100	72.495	Rhinopithecus_roxellana
ENSAMXG00000016855	sf3a3	87	91.617	ENSRROG00000033888	SF3A3	100	91.617	Rhinopithecus_roxellana
ENSAMXG00000016855	sf3a3	87	66.467	ENSSBOG00000026932	-	100	65.868	Saimiri_boliviensis_boliviensis
ENSAMXG00000016855	sf3a3	82	87.679	ENSSBOG00000032688	SF3A3	100	85.165	Saimiri_boliviensis_boliviensis
ENSAMXG00000016855	sf3a3	78	92.715	ENSSHAG00000014530	SF3A3	100	92.715	Sarcophilus_harrisii
ENSAMXG00000016855	sf3a3	87	95.409	ENSSFOG00015005975	sf3a3	100	95.409	Scleropages_formosus
ENSAMXG00000016855	sf3a3	87	94.212	ENSSMAG00000020213	sf3a3	100	94.212	Scophthalmus_maximus
ENSAMXG00000016855	sf3a3	87	91.218	ENSSDUG00000011590	sf3a3	100	91.218	Seriola_dumerili
ENSAMXG00000016855	sf3a3	87	94.810	ENSSLDG00000020635	sf3a3	100	94.810	Seriola_lalandi_dorsalis
ENSAMXG00000016855	sf3a3	87	91.018	ENSSPUG00000004010	SF3A3	100	91.018	Sphenodon_punctatus
ENSAMXG00000016855	sf3a3	87	94.411	ENSSPAG00000018653	sf3a3	100	94.411	Stegastes_partitus
ENSAMXG00000016855	sf3a3	87	91.617	ENSSSCG00000003643	SF3A3	100	91.617	Sus_scrofa
ENSAMXG00000016855	sf3a3	75	92.874	ENSTGUG00000001466	SF3A3	99	92.874	Taeniopygia_guttata
ENSAMXG00000016855	sf3a3	87	92.615	ENSTRUG00000009089	sf3a3	100	92.615	Takifugu_rubripes
ENSAMXG00000016855	sf3a3	87	92.048	ENSTNIG00000009800	sf3a3	100	92.048	Tetraodon_nigroviridis
ENSAMXG00000016855	sf3a3	87	80.639	ENSTBEG00000007614	SF3A3	100	80.639	Tupaia_belangeri
ENSAMXG00000016855	sf3a3	87	91.417	ENSTTRG00000013519	SF3A3	100	91.417	Tursiops_truncatus
ENSAMXG00000016855	sf3a3	87	91.617	ENSUAMG00000006134	SF3A3	100	91.617	Ursus_americanus
ENSAMXG00000016855	sf3a3	87	91.617	ENSUMAG00000021250	SF3A3	100	91.617	Ursus_maritimus
ENSAMXG00000016855	sf3a3	57	95.349	ENSVPAG00000004778	SF3A3	73	95.349	Vicugna_pacos
ENSAMXG00000016855	sf3a3	87	87.824	ENSVVUG00000022908	SF3A3	100	87.824	Vulpes_vulpes
ENSAMXG00000016855	sf3a3	87	88.822	ENSXETG00000022923	sf3a3	100	88.822	Xenopus_tropicalis
ENSAMXG00000016855	sf3a3	87	93.613	ENSXMAG00000017165	sf3a3	100	93.613	Xiphophorus_maculatus