EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000017073 (Gene tree)
Gene ID: 103046591
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 14573 bases
Position: chr13:29198514-29213086
Accession: 103046591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017597	RRM_5	PF13893.6	1.1e-07	1	1
ENSAMXP00000017597	RRM_1	PF00076.22	8.3e-84	1	5
ENSAMXP00000017597	RRM_1	PF00076.22	8.3e-84	2	5
ENSAMXP00000017597	RRM_1	PF00076.22	8.3e-84	3	5
ENSAMXP00000017597	RRM_1	PF00076.22	8.3e-84	4	5
ENSAMXP00000017597	RRM_1	PF00076.22	8.3e-84	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017597	-	2577	XM_022675643	ENSAMXP00000017597	858 (aa)	XP_022531364	W5LCN5

Gene Model

Click here to download ENSAMXG00000017073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000017073	rbm19	61	36.486	ENSAMXG00000018395	-	60	36.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017073	rbm19	99	53.534	ENSG00000122965	RBM19	90	71.000	Homo_sapiens
ENSAMXG00000017073	rbm19	99	62.555	ENSAPOG00000010507	rbm19	65	73.693	Acanthochromis_polyacanthus
ENSAMXG00000017073	rbm19	99	51.197	ENSAMEG00000008544	RBM19	87	60.130	Ailuropoda_melanoleuca
ENSAMXG00000017073	rbm19	97	63.363	ENSACIG00000017780	rbm19	64	75.306	Amphilophus_citrinellus
ENSAMXG00000017073	rbm19	99	62.162	ENSAOCG00000008554	rbm19	65	73.199	Amphiprion_ocellaris
ENSAMXG00000017073	rbm19	97	63.729	ENSAPEG00000022381	rbm19	63	74.390	Amphiprion_percula
ENSAMXG00000017073	rbm19	100	62.444	ENSATEG00000007000	rbm19	65	73.993	Anabas_testudineus
ENSAMXG00000017073	rbm19	95	49.890	ENSAPLG00000015319	RBM19	67	55.979	Anas_platyrhynchos
ENSAMXG00000017073	rbm19	92	62.704	ENSACAG00000005065	RBM19	87	62.439	Anolis_carolinensis
ENSAMXG00000017073	rbm19	92	60.484	ENSANAG00000024136	RBM19	87	60.968	Aotus_nancymaae
ENSAMXG00000017073	rbm19	99	58.849	ENSACLG00000001399	rbm19	65	65.728	Astatotilapia_calliptera
ENSAMXG00000017073	rbm19	99	53.788	ENSBTAG00000031824	RBM19	68	60.127	Bos_taurus
ENSAMXG00000017073	rbm19	83	40.741	WBGene00004315	rbd-1	81	46.121	Caenorhabditis_elegans
ENSAMXG00000017073	rbm19	99	52.391	ENSCJAG00000009798	RBM19	89	60.932	Callithrix_jacchus
ENSAMXG00000017073	rbm19	92	60.323	ENSCAFG00000009146	RBM19	87	61.650	Canis_familiaris
ENSAMXG00000017073	rbm19	92	60.484	ENSCAFG00020017862	RBM19	87	61.812	Canis_lupus_dingo
ENSAMXG00000017073	rbm19	99	54.506	ENSCHIG00000014917	RBM19	68	60.127	Capra_hircus
ENSAMXG00000017073	rbm19	63	57.361	ENSTSYG00000007207	RBM19	87	59.082	Carlito_syrichta
ENSAMXG00000017073	rbm19	99	48.898	ENSCAPG00000006869	RBM19	87	58.587	Cavia_aperea
ENSAMXG00000017073	rbm19	98	59.319	ENSCPOG00000026629	RBM19	88	60.196	Cavia_porcellus
ENSAMXG00000017073	rbm19	92	60.289	ENSCCAG00000021665	-	87	61.254	Cebus_capucinus
ENSAMXG00000017073	rbm19	95	45.864	ENSCCAG00000026637	-	86	56.082	Cebus_capucinus
ENSAMXG00000017073	rbm19	97	53.456	ENSCATG00000035841	RBM19	66	60.514	Cercocebus_atys
ENSAMXG00000017073	rbm19	68	58.654	ENSCLAG00000009965	RBM19	64	58.228	Chinchilla_lanigera
ENSAMXG00000017073	rbm19	99	66.518	ENSCSAG00000002352	RBM19	63	66.071	Chlorocebus_sabaeus
ENSAMXG00000017073	rbm19	99	56.356	ENSCPBG00000011990	RBM19	88	66.126	Chrysemys_picta_bellii
ENSAMXG00000017073	rbm19	78	53.873	ENSCING00000023076	-	88	53.873	Ciona_intestinalis
ENSAMXG00000017073	rbm19	99	53.862	ENSCANG00000035927	RBM19	87	60.674	Colobus_angolensis_palliatus
ENSAMXG00000017073	rbm19	99	53.249	ENSCGRG00001000323	Rbm19	88	61.452	Cricetulus_griseus_chok1gshd
ENSAMXG00000017073	rbm19	99	53.249	ENSCGRG00000010371	Rbm19	88	61.452	Cricetulus_griseus_crigri
ENSAMXG00000017073	rbm19	89	70.199	ENSCSEG00000017436	rbm19	89	70.333	Cynoglossus_semilaevis
ENSAMXG00000017073	rbm19	99	61.135	ENSCVAG00000000300	rbm19	66	71.500	Cyprinodon_variegatus
ENSAMXG00000017073	rbm19	99	66.847	ENSDARG00000042590	rbm19	64	77.685	Danio_rerio
ENSAMXG00000017073	rbm19	99	52.720	ENSDNOG00000024534	RBM19	84	60.261	Dasypus_novemcinctus
ENSAMXG00000017073	rbm19	97	53.152	ENSDORG00000008549	Rbm19	88	60.580	Dipodomys_ordii
ENSAMXG00000017073	rbm19	97	37.528	FBgn0036018	CG3335	65	41.304	Drosophila_melanogaster
ENSAMXG00000017073	rbm19	59	75.362	ENSETEG00000016887	-	57	75.362	Echinops_telfairi
ENSAMXG00000017073	rbm19	95	43.247	ENSEBUG00000008521	-	55	51.304	Eptatretus_burgeri
ENSAMXG00000017073	rbm19	99	53.333	ENSEASG00005009452	RBM19	64	60.680	Equus_asinus_asinus
ENSAMXG00000017073	rbm19	99	53.430	ENSECAG00000023716	RBM19	64	60.484	Equus_caballus
ENSAMXG00000017073	rbm19	99	63.239	ENSELUG00000012561	rbm19	66	71.927	Esox_lucius
ENSAMXG00000017073	rbm19	99	52.311	ENSFCAG00000002962	RBM19	64	60.420	Felis_catus
ENSAMXG00000017073	rbm19	98	54.777	ENSFALG00000007768	RBM19	64	64.262	Ficedula_albicollis
ENSAMXG00000017073	rbm19	68	58.533	ENSFDAG00000004629	RBM19	65	59.968	Fukomys_damarensis
ENSAMXG00000017073	rbm19	99	62.693	ENSFHEG00000012578	rbm19	90	68.060	Fundulus_heteroclitus
ENSAMXG00000017073	rbm19	97	59.955	ENSGMOG00000013120	rbm19	65	70.475	Gadus_morhua
ENSAMXG00000017073	rbm19	98	53.466	ENSGALG00000008289	RBM19	64	63.474	Gallus_gallus
ENSAMXG00000017073	rbm19	99	62.527	ENSGAFG00000012337	rbm19	66	72.575	Gambusia_affinis
ENSAMXG00000017073	rbm19	99	61.386	ENSGACG00000009462	rbm19	66	69.717	Gasterosteus_aculeatus
ENSAMXG00000017073	rbm19	65	65.636	ENSGAGG00000019457	RBM19	99	65.292	Gopherus_agassizii
ENSAMXG00000017073	rbm19	99	53.119	ENSGGOG00000007371	RBM19	64	60.450	Gorilla_gorilla
ENSAMXG00000017073	rbm19	99	63.193	ENSHBUG00000009047	rbm19	66	71.864	Haplochromis_burtoni
ENSAMXG00000017073	rbm19	68	60.393	ENSHGLG00000010899	RBM19	64	60.720	Heterocephalus_glaber_female
ENSAMXG00000017073	rbm19	68	59.420	ENSHGLG00100017936	RBM19	65	60.225	Heterocephalus_glaber_male
ENSAMXG00000017073	rbm19	99	62.697	ENSHCOG00000016446	rbm19	65	71.669	Hippocampus_comes
ENSAMXG00000017073	rbm19	99	69.817	ENSIPUG00000023849	rbm19	65	78.548	Ictalurus_punctatus
ENSAMXG00000017073	rbm19	99	63.375	ENSKMAG00000014807	rbm19	69	73.064	Kryptolebias_marmoratus
ENSAMXG00000017073	rbm19	99	61.487	ENSLBEG00000012897	rbm19	67	70.687	Labrus_bergylta
ENSAMXG00000017073	rbm19	71	55.312	ENSLACG00000012030	RBM19	87	62.141	Latimeria_chalumnae
ENSAMXG00000017073	rbm19	99	61.290	ENSLOCG00000008341	rbm19	70	70.500	Lepisosteus_oculatus
ENSAMXG00000017073	rbm19	95	51.636	ENSLAFG00000004187	RBM19	61	59.690	Loxodonta_africana
ENSAMXG00000017073	rbm19	99	53.486	ENSMFAG00000046091	RBM19	66	60.193	Macaca_fascicularis
ENSAMXG00000017073	rbm19	99	53.590	ENSMMUG00000010496	RBM19	65	60.353	Macaca_mulatta
ENSAMXG00000017073	rbm19	99	51.059	ENSMNEG00000028452	RBM19	64	56.270	Macaca_nemestrina
ENSAMXG00000017073	rbm19	99	53.021	ENSMLEG00000034550	RBM19	87	60.193	Mandrillus_leucophaeus
ENSAMXG00000017073	rbm19	99	64.052	ENSMAMG00000014397	rbm19	65	75.839	Mastacembelus_armatus
ENSAMXG00000017073	rbm19	99	63.814	ENSMZEG00005016607	rbm19	65	73.045	Maylandia_zebra
ENSAMXG00000017073	rbm19	97	48.210	ENSMGAG00000010087	RBM19	67	53.589	Meleagris_gallopavo
ENSAMXG00000017073	rbm19	93	60.948	ENSMAUG00000019290	Rbm19	89	61.264	Mesocricetus_auratus
ENSAMXG00000017073	rbm19	99	53.076	ENSMICG00000014423	RBM19	65	60.870	Microcebus_murinus
ENSAMXG00000017073	rbm19	99	59.568	ENSMMOG00000017839	rbm19	88	69.167	Mola_mola
ENSAMXG00000017073	rbm19	99	54.777	ENSMODG00000003597	RBM19	66	62.279	Monodelphis_domestica
ENSAMXG00000017073	rbm19	99	64.278	ENSMALG00000012647	rbm19	66	75.169	Monopterus_albus
ENSAMXG00000017073	rbm19	97	61.588	MGP_CAROLIEiJ_G0027656	Rbm19	87	61.264	Mus_caroli
ENSAMXG00000017073	rbm19	97	61.228	ENSMUSG00000029594	Rbm19	88	60.905	Mus_musculus
ENSAMXG00000017073	rbm19	92	60.778	MGP_PahariEiJ_G0024238	Rbm19	87	61.264	Mus_pahari
ENSAMXG00000017073	rbm19	97	61.129	MGP_SPRETEiJ_G0028656	Rbm19	88	61.774	Mus_spretus
ENSAMXG00000017073	rbm19	92	59.841	ENSMPUG00000002694	RBM19	90	60.510	Mustela_putorius_furo
ENSAMXG00000017073	rbm19	99	52.675	ENSMLUG00000015075	RBM19	87	60.863	Myotis_lucifugus
ENSAMXG00000017073	rbm19	99	53.417	ENSNGAG00000009076	Rbm19	88	60.806	Nannospalax_galili
ENSAMXG00000017073	rbm19	99	63.846	ENSNBRG00000005913	rbm19	66	73.913	Neolamprologus_brichardi
ENSAMXG00000017073	rbm19	99	53.015	ENSNLEG00000000190	RBM19	87	60.772	Nomascus_leucogenys
ENSAMXG00000017073	rbm19	88	59.031	ENSMEUG00000004045	RBM19	80	59.031	Notamacropus_eugenii
ENSAMXG00000017073	rbm19	99	52.844	ENSOPRG00000012064	RBM19	88	61.182	Ochotona_princeps
ENSAMXG00000017073	rbm19	93	59.699	ENSODEG00000012977	RBM19	88	59.699	Octodon_degus
ENSAMXG00000017073	rbm19	100	61.740	ENSONIG00000013576	rbm19	83	73.500	Oreochromis_niloticus
ENSAMXG00000017073	rbm19	99	53.180	ENSOCUG00000009398	RBM19	87	59.295	Oryctolagus_cuniculus
ENSAMXG00000017073	rbm19	99	61.889	ENSORLG00000008077	rbm19	65	70.973	Oryzias_latipes
ENSAMXG00000017073	rbm19	98	61.463	ENSORLG00020013187	rbm19	65	71.119	Oryzias_latipes_hni
ENSAMXG00000017073	rbm19	99	61.714	ENSORLG00015001774	rbm19	65	70.785	Oryzias_latipes_hsok
ENSAMXG00000017073	rbm19	99	62.866	ENSOMEG00000003334	rbm19	65	72.259	Oryzias_melastigma
ENSAMXG00000017073	rbm19	88	57.089	ENSOGAG00000000602	RBM19	87	58.790	Otolemur_garnettii
ENSAMXG00000017073	rbm19	99	53.930	ENSOARG00000006827	RBM19	68	60.353	Ovis_aries
ENSAMXG00000017073	rbm19	99	53.479	ENSPPAG00000043712	RBM19	64	60.514	Pan_paniscus
ENSAMXG00000017073	rbm19	99	51.996	ENSPPRG00000023027	RBM19	87	60.258	Panthera_pardus
ENSAMXG00000017073	rbm19	99	49.785	ENSPTIG00000011096	RBM19	66	56.522	Panthera_tigris_altaica
ENSAMXG00000017073	rbm19	99	53.479	ENSPTRG00000005494	RBM19	64	60.995	Pan_troglodytes
ENSAMXG00000017073	rbm19	68	60.386	ENSPANG00000004795	RBM19	67	60.514	Papio_anubis
ENSAMXG00000017073	rbm19	81	64.035	ENSPSIG00000008191	RBM19	86	64.386	Pelodiscus_sinensis
ENSAMXG00000017073	rbm19	97	72.549	ENSPMGG00000019087	rbm19	94	72.014	Periophthalmus_magnuspinnatus
ENSAMXG00000017073	rbm19	92	61.401	ENSPEMG00000018058	Rbm19	88	61.712	Peromyscus_maniculatus_bairdii
ENSAMXG00000017073	rbm19	93	60.835	ENSPCIG00000028861	RBM19	88	62.041	Phascolarctos_cinereus
ENSAMXG00000017073	rbm19	99	61.105	ENSPFOG00000015300	rbm19	65	72.027	Poecilia_formosa
ENSAMXG00000017073	rbm19	99	62.459	ENSPLAG00000000059	rbm19	89	72.483	Poecilia_latipinna
ENSAMXG00000017073	rbm19	99	63.009	ENSPMEG00000018585	rbm19	70	72.074	Poecilia_mexicana
ENSAMXG00000017073	rbm19	99	61.816	ENSPREG00000000978	rbm19	89	71.980	Poecilia_reticulata
ENSAMXG00000017073	rbm19	100	54.198	ENSPPYG00000004993	RBM19	66	60.514	Pongo_abelii
ENSAMXG00000017073	rbm19	97	60.032	ENSPCOG00000016190	RBM19	87	60.518	Propithecus_coquereli
ENSAMXG00000017073	rbm19	99	51.703	ENSPVAG00000011618	RBM19	64	58.720	Pteropus_vampyrus
ENSAMXG00000017073	rbm19	99	63.727	ENSPNYG00000017434	rbm19	65	73.613	Pundamilia_nyererei
ENSAMXG00000017073	rbm19	99	72.572	ENSPNAG00000012069	rbm19	65	82.537	Pygocentrus_nattereri
ENSAMXG00000017073	rbm19	93	60.225	ENSRNOG00000001397	Rbm19	88	61.675	Rattus_norvegicus
ENSAMXG00000017073	rbm19	99	53.278	ENSRBIG00000041419	RBM19	87	59.390	Rhinopithecus_bieti
ENSAMXG00000017073	rbm19	99	53.070	ENSRROG00000031938	RBM19	87	60.353	Rhinopithecus_roxellana
ENSAMXG00000017073	rbm19	56	39.029	YPR112C	-	58	37.115	Saccharomyces_cerevisiae
ENSAMXG00000017073	rbm19	92	58.039	ENSSBOG00000021434	-	87	58.682	Saimiri_boliviensis_boliviensis
ENSAMXG00000017073	rbm19	62	52.254	ENSSBOG00000022679	-	60	51.953	Saimiri_boliviensis_boliviensis
ENSAMXG00000017073	rbm19	99	54.545	ENSSHAG00000012256	RBM19	92	59.357	Sarcophilus_harrisii
ENSAMXG00000017073	rbm19	99	60.021	ENSSFOG00015005124	rbm19	64	69.320	Scleropages_formosus
ENSAMXG00000017073	rbm19	99	62.338	ENSSMAG00000011828	rbm19	64	73.613	Scophthalmus_maximus
ENSAMXG00000017073	rbm19	99	64.018	ENSSDUG00000013544	rbm19	66	74.037	Seriola_dumerili
ENSAMXG00000017073	rbm19	89	71.122	ENSSLDG00000025413	rbm19	90	71.122	Seriola_lalandi_dorsalis
ENSAMXG00000017073	rbm19	64	64.211	ENSSPUG00000011064	RBM19	98	64.912	Sphenodon_punctatus
ENSAMXG00000017073	rbm19	99	55.519	ENSSSCG00000009868	RBM19	67	61.452	Sus_scrofa
ENSAMXG00000017073	rbm19	100	54.764	ENSTGUG00000009017	RBM19	65	63.371	Taeniopygia_guttata
ENSAMXG00000017073	rbm19	97	60.156	ENSTRUG00000016032	rbm19	63	70.638	Takifugu_rubripes
ENSAMXG00000017073	rbm19	60	76.299	ENSTNIG00000015903	rbm19	94	76.299	Tetraodon_nigroviridis
ENSAMXG00000017073	rbm19	59	78.333	ENSTBEG00000000703	RBM19	54	77.049	Tupaia_belangeri
ENSAMXG00000017073	rbm19	70	59.375	ENSTTRG00000003987	RBM19	69	59.596	Tursiops_truncatus
ENSAMXG00000017073	rbm19	98	50.947	ENSUAMG00000002076	RBM19	86	60.484	Ursus_americanus
ENSAMXG00000017073	rbm19	99	49.586	ENSUMAG00000010816	RBM19	88	60.161	Ursus_maritimus
ENSAMXG00000017073	rbm19	92	60.645	ENSVVUG00000007886	RBM19	87	61.974	Vulpes_vulpes
ENSAMXG00000017073	rbm19	99	53.476	ENSXETG00000017668	rbm19	66	60.231	Xenopus_tropicalis
ENSAMXG00000017073	rbm19	99	71.786	ENSXCOG00000016995	rbm19	87	72.120	Xiphophorus_couchianus
ENSAMXG00000017073	rbm19	93	72.454	ENSXMAG00000007641	rbm19	91	72.287	Xiphophorus_maculatus