EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000017116 (Gene tree)
Gene ID: 103022673
Gene Symbol: trmt6
Alias: zgc:123193
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 11059 bases
Position: chr3:45501975-45513033
Accession: 103022673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017617	Gcd10p	PF04189.13	2.2e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017617	-	2140	XM_007229699	ENSAMXP00000017617	478 (aa)	XP_007229761	W5LCQ5

Gene Model

Click here to download ENSAMXG00000017116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017116	trmt6	96	58.264	ENSG00000089195	TRMT6	100	54.985	Homo_sapiens
ENSAMXG00000017116	trmt6	96	70.386	ENSAPOG00000008036	trmt6	99	70.021	Acanthochromis_polyacanthus
ENSAMXG00000017116	trmt6	96	57.764	ENSAMEG00000010635	TRMT6	96	57.350	Ailuropoda_melanoleuca
ENSAMXG00000017116	trmt6	96	65.368	ENSACIG00000004608	trmt6	98	65.368	Amphilophus_citrinellus
ENSAMXG00000017116	trmt6	97	67.672	ENSAOCG00000024322	trmt6	99	67.672	Amphiprion_ocellaris
ENSAMXG00000017116	trmt6	96	70.172	ENSAPEG00000017334	trmt6	99	69.807	Amphiprion_percula
ENSAMXG00000017116	trmt6	90	70.615	ENSATEG00000018498	trmt6	96	70.776	Anabas_testudineus
ENSAMXG00000017116	trmt6	91	57.930	ENSAPLG00000007761	TRMT6	99	57.456	Anas_platyrhynchos
ENSAMXG00000017116	trmt6	95	58.386	ENSACAG00000000575	TRMT6	98	57.749	Anolis_carolinensis
ENSAMXG00000017116	trmt6	95	58.368	ENSANAG00000021260	TRMT6	95	57.950	Aotus_nancymaae
ENSAMXG00000017116	trmt6	96	65.532	ENSACLG00000026034	trmt6	97	65.385	Astatotilapia_calliptera
ENSAMXG00000017116	trmt6	96	58.004	ENSBTAG00000001314	TRMT6	96	58.004	Bos_taurus
ENSAMXG00000017116	trmt6	96	58.058	ENSCJAG00000021296	TRMT6	96	57.645	Callithrix_jacchus
ENSAMXG00000017116	trmt6	96	58.058	ENSCAFG00000005969	TRMT6	96	57.851	Canis_familiaris
ENSAMXG00000017116	trmt6	96	58.264	ENSCAFG00020000777	TRMT6	96	58.058	Canis_lupus_dingo
ENSAMXG00000017116	trmt6	96	57.588	ENSCHIG00000010338	TRMT6	96	57.173	Capra_hircus
ENSAMXG00000017116	trmt6	94	58.700	ENSTSYG00000004286	TRMT6	95	58.105	Carlito_syrichta
ENSAMXG00000017116	trmt6	81	57.971	ENSCAPG00000015467	TRMT6	93	57.794	Cavia_aperea
ENSAMXG00000017116	trmt6	96	57.557	ENSCPOG00000013809	TRMT6	96	57.557	Cavia_porcellus
ENSAMXG00000017116	trmt6	95	58.824	ENSCCAG00000026939	TRMT6	95	58.159	Cebus_capucinus
ENSAMXG00000017116	trmt6	96	58.678	ENSCATG00000041111	TRMT6	96	58.264	Cercocebus_atys
ENSAMXG00000017116	trmt6	87	58.701	ENSCLAG00000013978	TRMT6	86	59.441	Chinchilla_lanigera
ENSAMXG00000017116	trmt6	96	58.471	ENSCSAG00000013461	TRMT6	96	58.058	Chlorocebus_sabaeus
ENSAMXG00000017116	trmt6	72	50.413	ENSCHOG00000012537	TRMT6	71	49.860	Choloepus_hoffmanni
ENSAMXG00000017116	trmt6	97	58.178	ENSCPBG00000023406	TRMT6	99	58.178	Chrysemys_picta_bellii
ENSAMXG00000017116	trmt6	90	36.036	ENSCING00000002472	-	93	35.198	Ciona_intestinalis
ENSAMXG00000017116	trmt6	90	39.229	ENSCSAVG00000001680	-	95	37.617	Ciona_savignyi
ENSAMXG00000017116	trmt6	96	58.471	ENSCANG00000002381	TRMT6	96	58.058	Colobus_angolensis_palliatus
ENSAMXG00000017116	trmt6	94	58.650	ENSCGRG00001003385	Trmt6	95	58.140	Cricetulus_griseus_chok1gshd
ENSAMXG00000017116	trmt6	94	58.650	ENSCGRG00000006540	Trmt6	95	58.140	Cricetulus_griseus_crigri
ENSAMXG00000017116	trmt6	96	65.944	ENSCSEG00000002228	trmt6	98	65.727	Cynoglossus_semilaevis
ENSAMXG00000017116	trmt6	96	66.022	ENSCVAG00000000341	trmt6	99	65.466	Cyprinodon_variegatus
ENSAMXG00000017116	trmt6	99	74.473	ENSDARG00000042344	trmt6	99	74.051	Danio_rerio
ENSAMXG00000017116	trmt6	96	56.468	ENSDNOG00000012785	TRMT6	97	56.468	Dasypus_novemcinctus
ENSAMXG00000017116	trmt6	95	58.577	ENSDORG00000006458	Trmt6	96	57.950	Dipodomys_ordii
ENSAMXG00000017116	trmt6	52	38.153	ENSETEG00000017282	-	69	38.153	Echinops_telfairi
ENSAMXG00000017116	trmt6	96	61.002	ENSEASG00005001411	TRMT6	96	60.784	Equus_asinus_asinus
ENSAMXG00000017116	trmt6	96	58.628	ENSECAG00000023914	TRMT6	96	58.212	Equus_caballus
ENSAMXG00000017116	trmt6	95	58.996	ENSEEUG00000006635	TRMT6	96	58.125	Erinaceus_europaeus
ENSAMXG00000017116	trmt6	99	70.981	ENSELUG00000013378	trmt6	81	70.981	Esox_lucius
ENSAMXG00000017116	trmt6	96	59.175	ENSFCAG00000003102	TRMT6	97	58.316	Felis_catus
ENSAMXG00000017116	trmt6	90	57.269	ENSFALG00000013575	TRMT6	98	58.811	Ficedula_albicollis
ENSAMXG00000017116	trmt6	95	56.785	ENSFDAG00000015117	TRMT6	86	58.469	Fukomys_damarensis
ENSAMXG00000017116	trmt6	96	67.447	ENSFHEG00000019957	trmt6	99	66.596	Fundulus_heteroclitus
ENSAMXG00000017116	trmt6	96	63.578	ENSGMOG00000011059	trmt6	99	74.812	Gadus_morhua
ENSAMXG00000017116	trmt6	95	56.842	ENSGALG00000009169	TRMT6	98	56.184	Gallus_gallus
ENSAMXG00000017116	trmt6	96	66.667	ENSGAFG00000008618	trmt6	98	66.667	Gambusia_affinis
ENSAMXG00000017116	trmt6	95	67.756	ENSGACG00000012471	trmt6	97	67.756	Gasterosteus_aculeatus
ENSAMXG00000017116	trmt6	97	58.592	ENSGAGG00000008464	TRMT6	99	58.444	Gopherus_agassizii
ENSAMXG00000017116	trmt6	96	58.471	ENSGGOG00000008597	TRMT6	96	58.058	Gorilla_gorilla
ENSAMXG00000017116	trmt6	96	65.957	ENSHBUG00000016631	trmt6	98	65.812	Haplochromis_burtoni
ENSAMXG00000017116	trmt6	95	56.159	ENSHGLG00000015405	TRMT6	96	56.604	Heterocephalus_glaber_female
ENSAMXG00000017116	trmt6	95	56.159	ENSHGLG00100004120	TRMT6	96	56.604	Heterocephalus_glaber_male
ENSAMXG00000017116	trmt6	96	65.727	ENSHCOG00000000118	trmt6	96	65.875	Hippocampus_comes
ENSAMXG00000017116	trmt6	96	82.174	ENSIPUG00000019365	trmt6	98	81.739	Ictalurus_punctatus
ENSAMXG00000017116	trmt6	95	58.246	ENSSTOG00000006863	TRMT6	96	57.652	Ictidomys_tridecemlineatus
ENSAMXG00000017116	trmt6	88	61.163	ENSJJAG00000007315	Trmt6	85	60.930	Jaculus_jaculus
ENSAMXG00000017116	trmt6	97	68.298	ENSKMAG00000001295	trmt6	100	67.505	Kryptolebias_marmoratus
ENSAMXG00000017116	trmt6	96	67.804	ENSLBEG00000025654	trmt6	98	68.085	Labrus_bergylta
ENSAMXG00000017116	trmt6	95	61.489	ENSLACG00000016478	TRMT6	95	60.851	Latimeria_chalumnae
ENSAMXG00000017116	trmt6	95	69.281	ENSLOCG00000016451	trmt6	98	68.308	Lepisosteus_oculatus
ENSAMXG00000017116	trmt6	95	58.700	ENSLAFG00000032216	TRMT6	95	57.983	Loxodonta_africana
ENSAMXG00000017116	trmt6	96	58.884	ENSMFAG00000044360	TRMT6	96	58.058	Macaca_fascicularis
ENSAMXG00000017116	trmt6	96	58.884	ENSMMUG00000013728	TRMT6	96	58.058	Macaca_mulatta
ENSAMXG00000017116	trmt6	96	58.884	ENSMNEG00000041831	TRMT6	96	58.471	Macaca_nemestrina
ENSAMXG00000017116	trmt6	96	58.471	ENSMLEG00000040762	TRMT6	96	58.058	Mandrillus_leucophaeus
ENSAMXG00000017116	trmt6	96	67.100	ENSMAMG00000012101	trmt6	98	69.032	Mastacembelus_armatus
ENSAMXG00000017116	trmt6	96	65.957	ENSMZEG00005010771	trmt6	97	65.812	Maylandia_zebra
ENSAMXG00000017116	trmt6	95	57.442	ENSMGAG00000007678	TRMT6	97	55.789	Meleagris_gallopavo
ENSAMXG00000017116	trmt6	94	58.824	ENSMAUG00000008719	Trmt6	95	58.439	Mesocricetus_auratus
ENSAMXG00000017116	trmt6	95	59.290	ENSMICG00000011626	TRMT6	96	58.664	Microcebus_murinus
ENSAMXG00000017116	trmt6	95	58.750	ENSMOCG00000022320	Trmt6	96	57.563	Microtus_ochrogaster
ENSAMXG00000017116	trmt6	98	64.407	ENSMMOG00000004412	trmt6	99	64.195	Mola_mola
ENSAMXG00000017116	trmt6	97	57.708	ENSMODG00000003784	TRMT6	97	56.667	Monodelphis_domestica
ENSAMXG00000017116	trmt6	96	62.554	ENSMALG00000018140	trmt6	97	62.284	Monopterus_albus
ENSAMXG00000017116	trmt6	96	58.750	MGP_CAROLIEiJ_G0024344	Trmt6	96	57.113	Mus_caroli
ENSAMXG00000017116	trmt6	98	58.300	ENSMUSG00000037376	Trmt6	97	56.735	Mus_musculus
ENSAMXG00000017116	trmt6	96	59.336	MGP_PahariEiJ_G0025789	Trmt6	96	58.958	Mus_pahari
ENSAMXG00000017116	trmt6	96	58.714	MGP_SPRETEiJ_G0025264	Trmt6	96	58.333	Mus_spretus
ENSAMXG00000017116	trmt6	85	58.852	ENSMPUG00000006317	TRMT6	89	58.612	Mustela_putorius_furo
ENSAMXG00000017116	trmt6	95	58.455	ENSMLUG00000006491	TRMT6	96	58.299	Myotis_lucifugus
ENSAMXG00000017116	trmt6	95	59.375	ENSNGAG00000015251	Trmt6	96	58.178	Nannospalax_galili
ENSAMXG00000017116	trmt6	96	62.554	ENSNBRG00000020261	trmt6	98	61.472	Neolamprologus_brichardi
ENSAMXG00000017116	trmt6	96	58.884	ENSNLEG00000013957	TRMT6	96	58.471	Nomascus_leucogenys
ENSAMXG00000017116	trmt6	85	58.852	ENSMEUG00000009179	TRMT6	99	57.794	Notamacropus_eugenii
ENSAMXG00000017116	trmt6	95	58.542	ENSOPRG00000008564	TRMT6	98	57.350	Ochotona_princeps
ENSAMXG00000017116	trmt6	95	57.290	ENSODEG00000005657	TRMT6	96	56.994	Octodon_degus
ENSAMXG00000017116	trmt6	96	66.596	ENSONIG00000000968	trmt6	98	66.383	Oreochromis_niloticus
ENSAMXG00000017116	trmt6	90	59.071	ENSOANG00000008403	-	99	58.889	Ornithorhynchus_anatinus
ENSAMXG00000017116	trmt6	94	57.684	ENSOCUG00000014669	TRMT6	95	57.263	Oryctolagus_cuniculus
ENSAMXG00000017116	trmt6	96	68.750	ENSORLG00000009862	trmt6	98	68.683	Oryzias_latipes
ENSAMXG00000017116	trmt6	96	68.319	ENSORLG00020001466	trmt6	98	68.035	Oryzias_latipes_hni
ENSAMXG00000017116	trmt6	96	69.181	ENSORLG00015015552	trmt6	98	69.828	Oryzias_latipes_hsok
ENSAMXG00000017116	trmt6	95	67.615	ENSOMEG00000019874	trmt6	98	66.379	Oryzias_melastigma
ENSAMXG00000017116	trmt6	96	59.213	ENSOGAG00000012950	TRMT6	96	59.213	Otolemur_garnettii
ENSAMXG00000017116	trmt6	96	57.350	ENSOARG00000017993	TRMT6	96	56.965	Ovis_aries
ENSAMXG00000017116	trmt6	96	57.732	ENSPPAG00000036809	TRMT6	96	57.732	Pan_paniscus
ENSAMXG00000017116	trmt6	96	58.522	ENSPPRG00000000424	TRMT6	97	58.111	Panthera_pardus
ENSAMXG00000017116	trmt6	96	58.522	ENSPTIG00000010629	TRMT6	97	58.111	Panthera_tigris_altaica
ENSAMXG00000017116	trmt6	96	58.678	ENSPTRG00000013231	TRMT6	100	54.985	Pan_troglodytes
ENSAMXG00000017116	trmt6	96	58.471	ENSPANG00000009284	TRMT6	96	58.058	Papio_anubis
ENSAMXG00000017116	trmt6	96	69.130	ENSPKIG00000003441	trmt6	97	67.826	Paramormyrops_kingsleyae
ENSAMXG00000017116	trmt6	95	57.684	ENSPSIG00000017048	TRMT6	98	57.652	Pelodiscus_sinensis
ENSAMXG00000017116	trmt6	93	67.114	ENSPMGG00000021074	trmt6	94	67.720	Periophthalmus_magnuspinnatus
ENSAMXG00000017116	trmt6	94	58.193	ENSPEMG00000023268	Trmt6	95	57.173	Peromyscus_maniculatus_bairdii
ENSAMXG00000017116	trmt6	96	58.664	ENSPCIG00000001546	TRMT6	93	58.491	Phascolarctos_cinereus
ENSAMXG00000017116	trmt6	96	65.126	ENSPFOG00000003037	trmt6	98	64.706	Poecilia_formosa
ENSAMXG00000017116	trmt6	96	67.527	ENSPLAG00000005143	trmt6	98	67.097	Poecilia_latipinna
ENSAMXG00000017116	trmt6	96	67.527	ENSPMEG00000014875	trmt6	98	67.097	Poecilia_mexicana
ENSAMXG00000017116	trmt6	97	63.793	ENSPREG00000016227	trmt6	98	63.578	Poecilia_reticulata
ENSAMXG00000017116	trmt6	96	58.471	ENSPPYG00000010691	TRMT6	96	58.058	Pongo_abelii
ENSAMXG00000017116	trmt6	95	57.684	ENSPCAG00000012098	TRMT6	95	57.773	Procavia_capensis
ENSAMXG00000017116	trmt6	96	58.299	ENSPCOG00000020723	TRMT6	96	57.676	Propithecus_coquereli
ENSAMXG00000017116	trmt6	95	54.470	ENSPVAG00000007539	TRMT6	96	54.280	Pteropus_vampyrus
ENSAMXG00000017116	trmt6	95	67.105	ENSPNYG00000000918	trmt6	98	65.721	Pundamilia_nyererei
ENSAMXG00000017116	trmt6	100	85.655	ENSPNAG00000019279	trmt6	100	85.655	Pygocentrus_nattereri
ENSAMXG00000017116	trmt6	96	58.787	ENSRNOG00000021270	Trmt6	96	59.119	Rattus_norvegicus
ENSAMXG00000017116	trmt6	96	56.762	ENSRBIG00000031132	TRMT6	96	57.438	Rhinopithecus_bieti
ENSAMXG00000017116	trmt6	96	58.471	ENSRROG00000045329	TRMT6	96	58.058	Rhinopithecus_roxellana
ENSAMXG00000017116	trmt6	78	54.750	ENSSBOG00000019803	-	94	54.250	Saimiri_boliviensis_boliviensis
ENSAMXG00000017116	trmt6	95	58.577	ENSSBOG00000033602	-	95	58.159	Saimiri_boliviensis_boliviensis
ENSAMXG00000017116	trmt6	95	57.717	ENSSHAG00000010754	TRMT6	93	57.928	Sarcophilus_harrisii
ENSAMXG00000017116	trmt6	97	70.213	ENSSFOG00015008429	trmt6	98	69.787	Scleropages_formosus
ENSAMXG00000017116	trmt6	96	70.753	ENSSMAG00000005352	trmt6	98	70.538	Scophthalmus_maximus
ENSAMXG00000017116	trmt6	96	69.462	ENSSDUG00000008294	trmt6	98	69.247	Seriola_dumerili
ENSAMXG00000017116	trmt6	96	69.677	ENSSLDG00000002180	trmt6	98	69.462	Seriola_lalandi_dorsalis
ENSAMXG00000017116	trmt6	95	54.393	ENSSARG00000005487	TRMT6	95	53.975	Sorex_araneus
ENSAMXG00000017116	trmt6	96	70.940	ENSSPAG00000011628	trmt6	99	70.726	Stegastes_partitus
ENSAMXG00000017116	trmt6	95	57.917	ENSSSCG00000007046	TRMT6	69	57.950	Sus_scrofa
ENSAMXG00000017116	trmt6	95	56.904	ENSTGUG00000002195	TRMT6	98	58.491	Taeniopygia_guttata
ENSAMXG00000017116	trmt6	96	65.217	ENSTRUG00000007153	trmt6	97	63.261	Takifugu_rubripes
ENSAMXG00000017116	trmt6	96	67.511	ENSTNIG00000010726	TRMT6	98	66.253	Tetraodon_nigroviridis
ENSAMXG00000017116	trmt6	57	62.838	ENSTBEG00000016317	TRMT6	57	62.838	Tupaia_belangeri
ENSAMXG00000017116	trmt6	96	57.438	ENSTTRG00000012889	TRMT6	96	57.025	Tursiops_truncatus
ENSAMXG00000017116	trmt6	96	57.557	ENSUAMG00000008674	TRMT6	96	56.549	Ursus_americanus
ENSAMXG00000017116	trmt6	96	57.971	ENSUMAG00000004999	TRMT6	96	56.965	Ursus_maritimus
ENSAMXG00000017116	trmt6	96	56.967	ENSVPAG00000002371	TRMT6	96	56.379	Vicugna_pacos
ENSAMXG00000017116	trmt6	96	58.264	ENSVVUG00000023370	TRMT6	96	57.884	Vulpes_vulpes
ENSAMXG00000017116	trmt6	95	58.774	ENSXETG00000004501	trmt6	97	57.773	Xenopus_tropicalis
ENSAMXG00000017116	trmt6	97	61.688	ENSXCOG00000007761	trmt6	99	61.472	Xiphophorus_couchianus
ENSAMXG00000017116	trmt6	96	66.882	ENSXMAG00000008592	trmt6	98	66.452	Xiphophorus_maculatus