EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000017180 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 38970 bases
Position: chr13:28807325-28846294
Accession: 103033743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017713	R3H	PF01424.22	7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017713	-	2670	XM_022675640	ENSAMXP00000017713	889 (aa)	XP_022531361	W5LD01

Gene Model

Click here to download ENSAMXG00000017180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000017180	r3hdm2	91	55.856	ENSAMXG00000003536	r3hdm1	92	43.257
ENSAMXG00000017180	r3hdm2	93	58.960	ENSAMXG00000012861	R3HDM1	82	58.074

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017180	r3hdm2	99	63.108	ENSG00000179912	R3HDM2	98	69.966	Homo_sapiens
ENSAMXG00000017180	r3hdm2	99	72.177	ENSAPOG00000020341	r3hdm2	94	69.909	Acanthochromis_polyacanthus
ENSAMXG00000017180	r3hdm2	99	58.777	ENSAMEG00000004812	R3HDM2	88	70.557	Ailuropoda_melanoleuca
ENSAMXG00000017180	r3hdm2	99	73.567	ENSACIG00000016146	r3hdm2	98	71.185	Amphilophus_citrinellus
ENSAMXG00000017180	r3hdm2	99	72.300	ENSAOCG00000023694	r3hdm2	95	70.050	Amphiprion_ocellaris
ENSAMXG00000017180	r3hdm2	99	74.394	ENSAPEG00000008851	r3hdm2	100	73.454	Amphiprion_percula
ENSAMXG00000017180	r3hdm2	99	72.492	ENSATEG00000025024	r3hdm2	100	70.631	Anabas_testudineus
ENSAMXG00000017180	r3hdm2	99	54.519	ENSAPLG00000004298	R3HDM2	82	73.333	Anas_platyrhynchos
ENSAMXG00000017180	r3hdm2	99	58.676	ENSACAG00000006388	R3HDM2	94	57.576	Anolis_carolinensis
ENSAMXG00000017180	r3hdm2	99	59.267	ENSANAG00000031310	-	96	58.447	Aotus_nancymaae
ENSAMXG00000017180	r3hdm2	99	61.099	ENSANAG00000025397	-	94	59.917	Aotus_nancymaae
ENSAMXG00000017180	r3hdm2	99	72.044	ENSACLG00000019106	r3hdm2	95	69.889	Astatotilapia_calliptera
ENSAMXG00000017180	r3hdm2	99	60.496	ENSBTAG00000018361	R3HDM2	94	59.814	Bos_taurus
ENSAMXG00000017180	r3hdm2	99	62.270	ENSCJAG00000007365	R3HDM2	93	61.622	Callithrix_jacchus
ENSAMXG00000017180	r3hdm2	99	60.874	ENSCAFG00000000215	R3HDM2	84	71.353	Canis_familiaris
ENSAMXG00000017180	r3hdm2	99	61.612	ENSCAFG00020023713	R3HDM2	94	60.745	Canis_lupus_dingo
ENSAMXG00000017180	r3hdm2	99	62.857	ENSCHIG00000014022	R3HDM2	94	62.156	Capra_hircus
ENSAMXG00000017180	r3hdm2	99	61.416	ENSTSYG00000001449	R3HDM2	94	60.593	Carlito_syrichta
ENSAMXG00000017180	r3hdm2	99	61.066	ENSCPOG00000009217	R3HDM2	94	59.815	Cavia_porcellus
ENSAMXG00000017180	r3hdm2	88	65.423	ENSCCAG00000026083	R3HDM2	89	62.469	Cebus_capucinus
ENSAMXG00000017180	r3hdm2	99	61.416	ENSCATG00000036929	R3HDM2	94	60.465	Cercocebus_atys
ENSAMXG00000017180	r3hdm2	99	61.303	ENSCLAG00000011997	R3HDM2	88	71.883	Chinchilla_lanigera
ENSAMXG00000017180	r3hdm2	99	58.806	ENSCSAG00000004911	R3HDM2	53	55.221	Chlorocebus_sabaeus
ENSAMXG00000017180	r3hdm2	70	66.048	ENSCHOG00000005636	R3HDM2	75	66.844	Choloepus_hoffmanni
ENSAMXG00000017180	r3hdm2	99	60.020	ENSCPBG00000013922	R3HDM2	94	58.824	Chrysemys_picta_bellii
ENSAMXG00000017180	r3hdm2	99	62.220	ENSCANG00000043807	R3HDM2	93	61.390	Colobus_angolensis_palliatus
ENSAMXG00000017180	r3hdm2	99	60.575	ENSCGRG00001017324	R3hdm2	88	70.856	Cricetulus_griseus_chok1gshd
ENSAMXG00000017180	r3hdm2	99	62.540	ENSCGRG00000003862	R3hdm2	88	70.856	Cricetulus_griseus_crigri
ENSAMXG00000017180	r3hdm2	99	70.641	ENSCSEG00000010925	r3hdm2	100	69.108	Cynoglossus_semilaevis
ENSAMXG00000017180	r3hdm2	99	71.026	ENSCVAG00000009058	r3hdm2	100	69.444	Cyprinodon_variegatus
ENSAMXG00000017180	r3hdm2	99	75.957	ENSDARG00000102610	r3hdm2	99	76.064	Danio_rerio
ENSAMXG00000017180	r3hdm2	99	58.077	ENSDNOG00000015033	R3HDM2	92	69.231	Dasypus_novemcinctus
ENSAMXG00000017180	r3hdm2	99	62.606	ENSDORG00000011462	R3hdm2	98	61.758	Dipodomys_ordii
ENSAMXG00000017180	r3hdm2	99	60.640	ENSEASG00005007091	R3HDM2	88	71.353	Equus_asinus_asinus
ENSAMXG00000017180	r3hdm2	99	60.496	ENSECAG00000003157	R3HDM2	88	71.353	Equus_caballus
ENSAMXG00000017180	r3hdm2	100	66.317	ENSELUG00000015969	r3hdm2	100	66.249	Esox_lucius
ENSAMXG00000017180	r3hdm2	99	61.335	ENSFCAG00000000192	R3HDM2	93	60.381	Felis_catus
ENSAMXG00000017180	r3hdm2	88	57.227	ENSFALG00000000255	R3HDM2	92	56.220	Ficedula_albicollis
ENSAMXG00000017180	r3hdm2	99	60.264	ENSFDAG00000019385	R3HDM2	87	71.618	Fukomys_damarensis
ENSAMXG00000017180	r3hdm2	99	71.168	ENSFHEG00000016484	r3hdm2	94	69.278	Fundulus_heteroclitus
ENSAMXG00000017180	r3hdm2	99	64.966	ENSGMOG00000007961	r3hdm2	94	69.467	Gadus_morhua
ENSAMXG00000017180	r3hdm2	99	60.547	ENSGALG00000043736	R3HDM2	94	56.624	Gallus_gallus
ENSAMXG00000017180	r3hdm2	99	72.718	ENSGAFG00000013887	r3hdm2	100	70.662	Gambusia_affinis
ENSAMXG00000017180	r3hdm2	99	69.307	ENSGACG00000006442	r3hdm2	99	68.218	Gasterosteus_aculeatus
ENSAMXG00000017180	r3hdm2	99	58.835	ENSGAGG00000017797	R3HDM2	94	57.746	Gopherus_agassizii
ENSAMXG00000017180	r3hdm2	99	61.416	ENSGGOG00000015007	R3HDM2	94	60.465	Gorilla_gorilla
ENSAMXG00000017180	r3hdm2	93	54.454	ENSHGLG00000010421	-	97	53.386	Heterocephalus_glaber_female
ENSAMXG00000017180	r3hdm2	99	62.513	ENSHGLG00000010434	-	94	61.905	Heterocephalus_glaber_female
ENSAMXG00000017180	r3hdm2	97	53.548	ENSHGLG00100018871	-	95	52.614	Heterocephalus_glaber_male
ENSAMXG00000017180	r3hdm2	99	60.550	ENSHGLG00100004183	-	94	59.772	Heterocephalus_glaber_male
ENSAMXG00000017180	r3hdm2	99	69.184	ENSHCOG00000001142	r3hdm2	91	68.705	Hippocampus_comes
ENSAMXG00000017180	r3hdm2	100	77.413	ENSIPUG00000023873	r3hdm2	91	78.878	Ictalurus_punctatus
ENSAMXG00000017180	r3hdm2	99	62.131	ENSSTOG00000013424	R3HDM2	94	61.311	Ictidomys_tridecemlineatus
ENSAMXG00000017180	r3hdm2	99	62.474	ENSJJAG00000010001	R3hdm2	94	61.181	Jaculus_jaculus
ENSAMXG00000017180	r3hdm2	99	71.142	ENSKMAG00000012695	r3hdm2	99	68.919	Kryptolebias_marmoratus
ENSAMXG00000017180	r3hdm2	99	70.653	ENSLBEG00000013115	r3hdm2	91	68.781	Labrus_bergylta
ENSAMXG00000017180	r3hdm2	100	66.871	ENSLOCG00000005976	r3hdm2	94	66.804	Lepisosteus_oculatus
ENSAMXG00000017180	r3hdm2	99	59.289	ENSLAFG00000006510	R3HDM2	88	71.088	Loxodonta_africana
ENSAMXG00000017180	r3hdm2	99	62.685	ENSMFAG00000036385	R3HDM2	94	61.864	Macaca_fascicularis
ENSAMXG00000017180	r3hdm2	99	62.685	ENSMMUG00000021789	R3HDM2	88	71.353	Macaca_mulatta
ENSAMXG00000017180	r3hdm2	99	61.352	ENSMNEG00000025314	R3HDM2	94	60.635	Macaca_nemestrina
ENSAMXG00000017180	r3hdm2	99	61.522	ENSMLEG00000028915	R3HDM2	94	60.571	Mandrillus_leucophaeus
ENSAMXG00000017180	r3hdm2	99	71.386	ENSMAMG00000009793	r3hdm2	95	69.880	Mastacembelus_armatus
ENSAMXG00000017180	r3hdm2	99	72.044	ENSMZEG00005007319	r3hdm2	95	69.889	Maylandia_zebra
ENSAMXG00000017180	r3hdm2	99	62.171	ENSMICG00000012389	R3HDM2	94	61.498	Microcebus_murinus
ENSAMXG00000017180	r3hdm2	99	60.184	ENSMOCG00000014425	R3hdm2	88	69.681	Microtus_ochrogaster
ENSAMXG00000017180	r3hdm2	99	74.370	ENSMMOG00000007448	r3hdm2	99	73.595	Mola_mola
ENSAMXG00000017180	r3hdm2	99	61.691	MGP_CAROLIEiJ_G0015896	R3hdm2	88	70.557	Mus_caroli
ENSAMXG00000017180	r3hdm2	99	62.724	ENSMUSG00000025404	R3hdm2	88	70.822	Mus_musculus
ENSAMXG00000017180	r3hdm2	99	61.380	MGP_PahariEiJ_G0031189	R3hdm2	88	70.822	Mus_pahari
ENSAMXG00000017180	r3hdm2	99	61.875	MGP_SPRETEiJ_G0016722	R3hdm2	88	70.822	Mus_spretus
ENSAMXG00000017180	r3hdm2	97	58.140	ENSMPUG00000001818	R3HDM2	84	70.822	Mustela_putorius_furo
ENSAMXG00000017180	r3hdm2	99	59.154	ENSMLUG00000004980	R3HDM2	88	71.088	Myotis_lucifugus
ENSAMXG00000017180	r3hdm2	99	61.310	ENSNGAG00000018800	R3hdm2	94	59.712	Nannospalax_galili
ENSAMXG00000017180	r3hdm2	99	73.312	ENSNBRG00000004483	r3hdm2	99	71.262	Neolamprologus_brichardi
ENSAMXG00000017180	r3hdm2	99	61.205	ENSNLEG00000017351	R3HDM2	94	60.571	Nomascus_leucogenys
ENSAMXG00000017180	r3hdm2	96	57.825	ENSMEUG00000008588	R3HDM2	88	58.621	Notamacropus_eugenii
ENSAMXG00000017180	r3hdm2	99	59.499	ENSOPRG00000013670	R3HDM2	88	63.696	Ochotona_princeps
ENSAMXG00000017180	r3hdm2	99	70.546	ENSONIG00000005075	r3hdm2	94	70.351	Oreochromis_niloticus
ENSAMXG00000017180	r3hdm2	99	58.708	ENSOCUG00000013258	R3HDM2	87	70.822	Oryctolagus_cuniculus
ENSAMXG00000017180	r3hdm2	99	70.152	ENSORLG00000005502	r3hdm2	95	66.699	Oryzias_latipes
ENSAMXG00000017180	r3hdm2	99	71.170	ENSORLG00020017069	r3hdm2	94	69.616	Oryzias_latipes_hni
ENSAMXG00000017180	r3hdm2	99	70.882	ENSORLG00015012735	r3hdm2	94	69.010	Oryzias_latipes_hsok
ENSAMXG00000017180	r3hdm2	99	73.155	ENSOMEG00000018079	r3hdm2	93	71.922	Oryzias_melastigma
ENSAMXG00000017180	r3hdm2	99	60.754	ENSOGAG00000012055	R3HDM2	54	54.867	Otolemur_garnettii
ENSAMXG00000017180	r3hdm2	95	55.934	ENSOGAG00000027966	-	93	54.455	Otolemur_garnettii
ENSAMXG00000017180	r3hdm2	99	60.825	ENSOARG00000006929	R3HDM2	94	60.103	Ovis_aries
ENSAMXG00000017180	r3hdm2	99	61.628	ENSPPAG00000034395	R3HDM2	94	60.677	Pan_paniscus
ENSAMXG00000017180	r3hdm2	99	61.335	ENSPPRG00000009240	R3HDM2	94	59.834	Panthera_pardus
ENSAMXG00000017180	r3hdm2	99	61.335	ENSPTIG00000008752	R3HDM2	94	59.834	Panthera_tigris_altaica
ENSAMXG00000017180	r3hdm2	99	62.791	ENSPTRG00000046457	R3HDM2	94	61.970	Pan_troglodytes
ENSAMXG00000017180	r3hdm2	99	61.628	ENSPANG00000024002	R3HDM2	96	60.571	Papio_anubis
ENSAMXG00000017180	r3hdm2	100	74.921	ENSPKIG00000003171	r3hdm2	96	74.386	Paramormyrops_kingsleyae
ENSAMXG00000017180	r3hdm2	99	72.311	ENSPMGG00000007061	r3hdm2	99	71.520	Periophthalmus_magnuspinnatus
ENSAMXG00000017180	r3hdm2	99	61.066	ENSPEMG00000015964	R3hdm2	88	70.856	Peromyscus_maniculatus_bairdii
ENSAMXG00000017180	r3hdm2	99	60.612	ENSPCIG00000023841	R3HDM2	94	58.993	Phascolarctos_cinereus
ENSAMXG00000017180	r3hdm2	99	81.792	ENSPFOG00000006077	r3hdm2	92	81.792	Poecilia_formosa
ENSAMXG00000017180	r3hdm2	99	72.670	ENSPLAG00000002971	r3hdm2	99	70.619	Poecilia_latipinna
ENSAMXG00000017180	r3hdm2	99	72.670	ENSPMEG00000005330	r3hdm2	99	70.619	Poecilia_mexicana
ENSAMXG00000017180	r3hdm2	99	73.130	ENSPREG00000008424	r3hdm2	100	70.961	Poecilia_reticulata
ENSAMXG00000017180	r3hdm2	97	60.087	ENSPPYG00000004685	R3HDM2	76	59.412	Pongo_abelii
ENSAMXG00000017180	r3hdm2	85	71.014	ENSPCAG00000014642	R3HDM2	83	72.101	Procavia_capensis
ENSAMXG00000017180	r3hdm2	99	60.952	ENSPCOG00000013201	R3HDM2	94	60.064	Propithecus_coquereli
ENSAMXG00000017180	r3hdm2	99	58.969	ENSPVAG00000003967	R3HDM2	94	57.895	Pteropus_vampyrus
ENSAMXG00000017180	r3hdm2	99	68.827	ENSPNYG00000013479	r3hdm2	100	66.494	Pundamilia_nyererei
ENSAMXG00000017180	r3hdm2	100	84.474	ENSPNAG00000017473	r3hdm2	94	84.474	Pygocentrus_nattereri
ENSAMXG00000017180	r3hdm2	99	60.041	ENSRNOG00000007801	R3hdm2	88	69.496	Rattus_norvegicus
ENSAMXG00000017180	r3hdm2	99	60.085	ENSRBIG00000037403	R3HDM2	93	59.445	Rhinopithecus_bieti
ENSAMXG00000017180	r3hdm2	99	61.311	ENSRROG00000022271	R3HDM2	84	71.353	Rhinopithecus_roxellana
ENSAMXG00000017180	r3hdm2	99	61.311	ENSSBOG00000023547	R3HDM2	94	60.103	Saimiri_boliviensis_boliviensis
ENSAMXG00000017180	r3hdm2	99	57.512	ENSSHAG00000003511	R3HDM2	85	73.585	Sarcophilus_harrisii
ENSAMXG00000017180	r3hdm2	99	71.130	ENSSMAG00000012073	r3hdm2	100	70.440	Scophthalmus_maximus
ENSAMXG00000017180	r3hdm2	99	73.291	ENSSDUG00000019269	r3hdm2	100	71.684	Seriola_dumerili
ENSAMXG00000017180	r3hdm2	99	73.551	ENSSLDG00000005252	r3hdm2	100	71.459	Seriola_lalandi_dorsalis
ENSAMXG00000017180	r3hdm2	93	61.688	ENSSARG00000003958	R3HDM2	88	62.662	Sorex_araneus
ENSAMXG00000017180	r3hdm2	99	59.169	ENSSPUG00000014132	R3HDM2	94	58.198	Sphenodon_punctatus
ENSAMXG00000017180	r3hdm2	99	72.257	ENSSPAG00000022594	r3hdm2	100	71.718	Stegastes_partitus
ENSAMXG00000017180	r3hdm2	99	61.270	ENSSSCG00000026498	R3HDM2	100	54.911	Sus_scrofa
ENSAMXG00000017180	r3hdm2	99	72.871	ENSTRUG00000015075	r3hdm2	99	70.637	Takifugu_rubripes
ENSAMXG00000017180	r3hdm2	93	83.526	ENSTNIG00000007057	r3hdm2	86	83.526	Tetraodon_nigroviridis
ENSAMXG00000017180	r3hdm2	79	63.404	ENSTBEG00000015967	R3HDM2	73	66.200	Tupaia_belangeri
ENSAMXG00000017180	r3hdm2	81	69.415	ENSTTRG00000013082	R3HDM2	76	69.415	Tursiops_truncatus
ENSAMXG00000017180	r3hdm2	99	60.393	ENSUAMG00000020913	R3HDM2	89	59.627	Ursus_americanus
ENSAMXG00000017180	r3hdm2	96	59.780	ENSUMAG00000019179	R3HDM2	93	58.617	Ursus_maritimus
ENSAMXG00000017180	r3hdm2	88	72.297	ENSVPAG00000008656	R3HDM2	79	73.835	Vicugna_pacos
ENSAMXG00000017180	r3hdm2	97	58.722	ENSVVUG00000018014	R3HDM2	91	57.868	Vulpes_vulpes
ENSAMXG00000017180	r3hdm2	99	58.689	ENSXETG00000017153	r3hdm2	94	57.039	Xenopus_tropicalis
ENSAMXG00000017180	r3hdm2	91	71.510	ENSXCOG00000013882	r3hdm2	100	69.738	Xiphophorus_couchianus
ENSAMXG00000017180	r3hdm2	99	71.328	ENSXMAG00000017978	r3hdm2	100	69.056	Xiphophorus_maculatus